BLASTX nr result

ID: Cnidium21_contig00023490 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023490
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328688.1| actin related protein [Populus trichocarpa] ...   273   8e-72
ref|XP_002275561.2| PREDICTED: actin-related protein 4-like [Vit...   270   7e-71
emb|CBI15426.3| unnamed protein product [Vitis vinifera]              270   7e-71
ref|XP_002511960.1| protein binding protein, putative [Ricinus c...   268   3e-70
ref|XP_004138236.1| PREDICTED: actin-related protein 4-like [Cuc...   266   2e-69

>ref|XP_002328688.1| actin related protein [Populus trichocarpa]
           gi|222838864|gb|EEE77215.1| actin related protein
           [Populus trichocarpa]
          Length = 420

 Score =  273 bits (699), Expect = 8e-72
 Identities = 137/174 (78%), Positives = 147/174 (84%), Gaps = 18/174 (10%)
 Frame = +3

Query: 3   LMFEKYNIPALFLAKNDVLTSFASGRATSLVVDSGGGSTTIAPVHDGYVLQKAVASSPIG 182
           L+FEKYN+PALFLAKN VLTSFASGRATSLVVD GGGSTTIAPVHDGYVLQKAVASSPIG
Sbjct: 125 LIFEKYNVPALFLAKNAVLTSFASGRATSLVVDGGGGSTTIAPVHDGYVLQKAVASSPIG 184

Query: 183 GEFLTDCLIKSLESKGL------------------NTVDIDFPQTTESYRIYSQRIIASD 308
           GE LTDCL+KSLESKG+                   TVD+DFP TTESYR+YSQR+IASD
Sbjct: 185 GELLTDCLLKSLESKGVMIKPRYSFKRKEIQLGVFQTVDLDFPSTTESYRLYSQRVIASD 244

Query: 309 IKECVCRALDAPYDETSYSNIPMMPYELPDGQTIEIGADRFKTPDVLFNPSLVQ 470
           IKECVCRA D PYDE+SYSNIPM PYELPDGQTIEIGADRFK PD+LFNPSL+Q
Sbjct: 245 IKECVCRAPDTPYDESSYSNIPMTPYELPDGQTIEIGADRFKIPDILFNPSLIQ 298


>ref|XP_002275561.2| PREDICTED: actin-related protein 4-like [Vitis vinifera]
          Length = 444

 Score =  270 bits (691), Expect = 7e-71
 Identities = 134/174 (77%), Positives = 148/174 (85%), Gaps = 18/174 (10%)
 Frame = +3

Query: 3   LMFEKYNIPALFLAKNDVLTSFASGRATSLVVDSGGGSTTIAPVHDGYVLQKAVASSPIG 182
           LMFEKY +PALFLAKN VLTSFASGRATSLVVDSGGGSTT+APVHDGYVLQKAVASSPIG
Sbjct: 149 LMFEKYEVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVLQKAVASSPIG 208

Query: 183 GEFLTDCLIKSLESKGLN------------------TVDIDFPQTTESYRIYSQRIIASD 308
           GEFLT+C++KSLESKG++                  TVD+DFP TTESY++YSQR+IASD
Sbjct: 209 GEFLTECMMKSLESKGISIKPRYSFKRKETRPGDFQTVDVDFPNTTESYKLYSQRVIASD 268

Query: 309 IKECVCRALDAPYDETSYSNIPMMPYELPDGQTIEIGADRFKTPDVLFNPSLVQ 470
           IKECVCRA D P+DE++YSNIPM PYELPDGQTIEIGADRFK PDVLFNPSL Q
Sbjct: 269 IKECVCRAPDTPFDESAYSNIPMTPYELPDGQTIEIGADRFKVPDVLFNPSLAQ 322


>emb|CBI15426.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  270 bits (691), Expect = 7e-71
 Identities = 134/174 (77%), Positives = 148/174 (85%), Gaps = 18/174 (10%)
 Frame = +3

Query: 3   LMFEKYNIPALFLAKNDVLTSFASGRATSLVVDSGGGSTTIAPVHDGYVLQKAVASSPIG 182
           LMFEKY +PALFLAKN VLTSFASGRATSLVVDSGGGSTT+APVHDGYVLQKAVASSPIG
Sbjct: 147 LMFEKYEVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVLQKAVASSPIG 206

Query: 183 GEFLTDCLIKSLESKGLN------------------TVDIDFPQTTESYRIYSQRIIASD 308
           GEFLT+C++KSLESKG++                  TVD+DFP TTESY++YSQR+IASD
Sbjct: 207 GEFLTECMMKSLESKGISIKPRYSFKRKETRPGDFQTVDVDFPNTTESYKLYSQRVIASD 266

Query: 309 IKECVCRALDAPYDETSYSNIPMMPYELPDGQTIEIGADRFKTPDVLFNPSLVQ 470
           IKECVCRA D P+DE++YSNIPM PYELPDGQTIEIGADRFK PDVLFNPSL Q
Sbjct: 267 IKECVCRAPDTPFDESAYSNIPMTPYELPDGQTIEIGADRFKVPDVLFNPSLAQ 320


>ref|XP_002511960.1| protein binding protein, putative [Ricinus communis]
           gi|223549140|gb|EEF50629.1| protein binding protein,
           putative [Ricinus communis]
          Length = 442

 Score =  268 bits (686), Expect = 3e-70
 Identities = 135/174 (77%), Positives = 144/174 (82%), Gaps = 18/174 (10%)
 Frame = +3

Query: 3   LMFEKYNIPALFLAKNDVLTSFASGRATSLVVDSGGGSTTIAPVHDGYVLQKAVASSPIG 182
           LMFEKYN+PALFLAKN VLTSFASGR TSLVVDSGGGSTT+APVHDGYVLQKAVASSPIG
Sbjct: 147 LMFEKYNVPALFLAKNAVLTSFASGRPTSLVVDSGGGSTTVAPVHDGYVLQKAVASSPIG 206

Query: 183 GEFLTDCLIKSLESKGL------------------NTVDIDFPQTTESYRIYSQRIIASD 308
           GEFLTDCL+KSLESKG+                   TVD+DFP TTESY++YSQRIIASD
Sbjct: 207 GEFLTDCLLKSLESKGITIKPRYSFRRKENRPGEFQTVDVDFPNTTESYKLYSQRIIASD 266

Query: 309 IKECVCRALDAPYDETSYSNIPMMPYELPDGQTIEIGADRFKTPDVLFNPSLVQ 470
           IKECVCRA D  YDE +YSNIPM PYELPDGQTIEIGADRFK PD+LFNP L Q
Sbjct: 267 IKECVCRAPDTAYDEKAYSNIPMTPYELPDGQTIEIGADRFKIPDILFNPPLAQ 320


>ref|XP_004138236.1| PREDICTED: actin-related protein 4-like [Cucumis sativus]
           gi|449477069|ref|XP_004154920.1| PREDICTED:
           actin-related protein 4-like [Cucumis sativus]
          Length = 445

 Score =  266 bits (679), Expect = 2e-69
 Identities = 131/174 (75%), Positives = 145/174 (83%), Gaps = 18/174 (10%)
 Frame = +3

Query: 3   LMFEKYNIPALFLAKNDVLTSFASGRATSLVVDSGGGSTTIAPVHDGYVLQKAVASSPIG 182
           +MFEKY +PALFLAKN VLTSFASGRATSLVVDSGGGSTT+APVHDGYV QKAV SSP+G
Sbjct: 150 IMFEKYKVPALFLAKNAVLTSFASGRATSLVVDSGGGSTTVAPVHDGYVFQKAVVSSPVG 209

Query: 183 GEFLTDCLIKSLESKGLNT------------------VDIDFPQTTESYRIYSQRIIASD 308
           G+FLTDCL+KSLESKG+                    V++DFP TTESY++YSQR+IASD
Sbjct: 210 GDFLTDCLLKSLESKGIKIMPRYSFKRKEIRPGEFQIVELDFPNTTESYKLYSQRVIASD 269

Query: 309 IKECVCRALDAPYDETSYSNIPMMPYELPDGQTIEIGADRFKTPDVLFNPSLVQ 470
           IKECVCRA D PYDE++YSNIPM PYELPDGQTIEIGADRFK PDVLFNPSLVQ
Sbjct: 270 IKECVCRAPDTPYDESAYSNIPMTPYELPDGQTIEIGADRFKIPDVLFNPSLVQ 323


Top