BLASTX nr result

ID: Cnidium21_contig00023476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023476
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...   196   2e-48
emb|CBI22513.3| unnamed protein product [Vitis vinifera]              196   2e-48
emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]   192   2e-47
ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Gly...   167   6e-40
ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, puta...   166   2e-39

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score =  196 bits (497), Expect = 2e-48
 Identities = 99/138 (71%), Positives = 107/138 (77%)
 Frame = -1

Query: 416 FDAAASTSVQGELSSGKPIFHGVSIFVDGFTIPSSQELRGYMLKYGGRFENYFSRHRVTH 237
           FDA AS+S    LSSGKPIFHGVS+FVDGFTIPSSQELRGYM+++GG FENYFSRHRVTH
Sbjct: 81  FDAGASSSSHSALSSGKPIFHGVSVFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTH 140

Query: 236 XXXXXXXXXXXXXXXXXXXXICSNLPDSKMKNLRSFSAGLPVLKPTWVLDSVAANKLLSW 57
                               ICSNLPDSK+KNLRSFS GLPV+KPTWVLDSVAANKLLSW
Sbjct: 141 -------------------IICSNLPDSKIKNLRSFSGGLPVVKPTWVLDSVAANKLLSW 181

Query: 56  HSYQLDQLATETQGQPKL 3
             YQLDQLA ET+ QPKL
Sbjct: 182 IPYQLDQLANETRNQPKL 199


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score =  196 bits (497), Expect = 2e-48
 Identities = 99/138 (71%), Positives = 107/138 (77%)
 Frame = -1

Query: 416 FDAAASTSVQGELSSGKPIFHGVSIFVDGFTIPSSQELRGYMLKYGGRFENYFSRHRVTH 237
           FDA AS+S    LSSGKPIFHGVS+FVDGFTIPSSQELRGYM+++GG FENYFSRHRVTH
Sbjct: 81  FDAGASSSSHSALSSGKPIFHGVSVFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTH 140

Query: 236 XXXXXXXXXXXXXXXXXXXXICSNLPDSKMKNLRSFSAGLPVLKPTWVLDSVAANKLLSW 57
                               ICSNLPDSK+KNLRSFS GLPV+KPTWVLDSVAANKLLSW
Sbjct: 141 -------------------IICSNLPDSKIKNLRSFSGGLPVVKPTWVLDSVAANKLLSW 181

Query: 56  HSYQLDQLATETQGQPKL 3
             YQLDQLA ET+ QPKL
Sbjct: 182 IPYQLDQLANETRNQPKL 199


>emb|CAN67721.1| hypothetical protein VITISV_006020 [Vitis vinifera]
          Length = 500

 Score =  192 bits (488), Expect = 2e-47
 Identities = 98/138 (71%), Positives = 105/138 (76%)
 Frame = -1

Query: 416 FDAAASTSVQGELSSGKPIFHGVSIFVDGFTIPSSQELRGYMLKYGGRFENYFSRHRVTH 237
           FDA AS+S     SSGKPIFHGVS FVDGFTIPSSQELRGYM+++GG FENYFSRHRVTH
Sbjct: 81  FDAGASSSSHSAXSSGKPIFHGVSXFVDGFTIPSSQELRGYMMRHGGHFENYFSRHRVTH 140

Query: 236 XXXXXXXXXXXXXXXXXXXXICSNLPDSKMKNLRSFSAGLPVLKPTWVLDSVAANKLLSW 57
                               ICSNLPDSK+KNLRSFS GLPV+KPTWVLDSVAANKLLSW
Sbjct: 141 I-------------------ICSNLPDSKIKNLRSFSGGLPVVKPTWVLDSVAANKLLSW 181

Query: 56  HSYQLDQLATETQGQPKL 3
             YQLDQLA ET+ QPKL
Sbjct: 182 IPYQLDQLANETRNQPKL 199


>ref|XP_003516774.1| PREDICTED: DNA repair protein REV1-like [Glycine max]
          Length = 1115

 Score =  167 bits (424), Expect = 6e-40
 Identities = 91/138 (65%), Positives = 100/138 (72%)
 Frame = -1

Query: 416 FDAAASTSVQGELSSGKPIFHGVSIFVDGFTIPSSQELRGYMLKYGGRFENYFSRHRVTH 237
           F+A ASTS    L+    +F GVSIFVDGFTIPS+QELR YMLKYGGRFENYFSRHRVTH
Sbjct: 73  FEAQASTS---SLTLSASLFSGVSIFVDGFTIPSNQELRSYMLKYGGRFENYFSRHRVTH 129

Query: 236 XXXXXXXXXXXXXXXXXXXXICSNLPDSKMKNLRSFSAGLPVLKPTWVLDSVAANKLLSW 57
                               ICSNLPDSK+KNLR+FSAGLPV+KPTW+LDSVAAN+LLSW
Sbjct: 130 I-------------------ICSNLPDSKVKNLRAFSAGLPVVKPTWILDSVAANRLLSW 170

Query: 56  HSYQLDQLATETQGQPKL 3
             YQLDQLA     QPKL
Sbjct: 171 VPYQLDQLA---NNQPKL 185


>ref|XP_002518660.1| terminal deoxycytidyl transferase rev1, putative [Ricinus communis]
           gi|223542041|gb|EEF43585.1| terminal deoxycytidyl
           transferase rev1, putative [Ricinus communis]
          Length = 1200

 Score =  166 bits (419), Expect = 2e-39
 Identities = 91/138 (65%), Positives = 99/138 (71%)
 Frame = -1

Query: 416 FDAAASTSVQGELSSGKPIFHGVSIFVDGFTIPSSQELRGYMLKYGGRFENYFSRHRVTH 237
           F+AAAS S  G+      IF+GVSIFVDGFT PSSQELRGYMLKYGGRFENYFSRHRVTH
Sbjct: 79  FNAAASNSSNGD----GLIFNGVSIFVDGFTSPSSQELRGYMLKYGGRFENYFSRHRVTH 134

Query: 236 XXXXXXXXXXXXXXXXXXXXICSNLPDSKMKNLRSFSAGLPVLKPTWVLDSVAANKLLSW 57
                               ICSNLPDSK+KNLRSFS GLPV++P W+LDSVAANKLLSW
Sbjct: 135 I-------------------ICSNLPDSKIKNLRSFSGGLPVVRPAWILDSVAANKLLSW 175

Query: 56  HSYQLDQLATETQGQPKL 3
             YQL+QLA     QPKL
Sbjct: 176 VPYQLEQLA---NNQPKL 190


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