BLASTX nr result

ID: Cnidium21_contig00023422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023422
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC98494.1| AG-motif binding protein-4 [Nicotiana tabacum]         97   1e-18
gb|ADL36697.1| GATA domain class transcription factor [Malus x d...    80   2e-13
ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like ...    78   7e-13
emb|CBI38005.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>dbj|BAC98494.1| AG-motif binding protein-4 [Nicotiana tabacum]
          Length = 326

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 69/181 (38%), Positives = 86/181 (47%), Gaps = 18/181 (9%)
 Frame = +3

Query: 9   MEARALKKSLLSEVAMKTTTAQQVFFDDVWCVTNVGCXXXXXXXXXXXXXXXXXE----- 173
           +EARALK S LS++AMKT+  QQVF DD+WCV  +                   +     
Sbjct: 4   IEARALKSSFLSDMAMKTS--QQVFLDDIWCVAGINNVPSDDFSVDDLLDFSDKDFKDGQ 61

Query: 174 --SFIKENEEKXXXXXXXXXXXXXXXXXXXXASLTAADELTVPVDEMENLEWLSQFVDDS 347
               + E++EK                     S +   EL VPVDE+ENLEWLSQFVDDS
Sbjct: 62  SLQELHEDDEKDSFSGSSQHRNSQVSNFSCMDSFSG--ELPVPVDELENLEWLSQFVDDS 119

Query: 348 VSGMSLLCSAGKFSG-------HRSEPDRK----RFTVLDLPNPVHKKPRTKRFRTSSKA 494
            S  SLLC AG F          RSEP  +    +  V   P PV +KPRT R R + + 
Sbjct: 120 TSEFSLLCPAGSFKDKTGGFQVSRSEPVVRPVVQKLKVPCFPLPVVQKPRTYRSRPAGRK 179

Query: 495 W 497
           W
Sbjct: 180 W 180


>gb|ADL36697.1| GATA domain class transcription factor [Malus x domestica]
          Length = 321

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
 Frame = +3

Query: 3   YCMEARALKKSLLSEVAMKTTTAQQVFFDDVWCVTNVG---CXXXXXXXXXXXXXXXXXE 173
           YC+EA+ALK SL  E+A+K+T  Q V  +++WC T +    C                 +
Sbjct: 3   YCIEAKALKSSLRRELAVKST--QHVLLEELWCATGISGVPCEDFSVDDLLDLSNGEFED 60

Query: 174 SFIKENEEKXXXXXXXXXXXXXXXXXXXXASLTAADELTVPVDEMENLEWLSQFVDDSVS 353
             ++E EE+                    +    A +L VP D++  LEW+S FVDDS+ 
Sbjct: 61  GSVEEEEEEKESVSVDDEISNSSSLVLPDSDSGLATQLLVPDDDLAELEWVSHFVDDSLP 120

Query: 354 GMSLLCSAG-----KFSGHRSEPDRKRFTVLD--LPNPVHKKPRTKRFRTSSKAW 497
            +SL  + G         +R EP+ K   +     P  V  KPRTKR++ +S+ W
Sbjct: 121 DLSLFHTIGTQKPEALLMNRFEPEPKPVPLRAPLFPFQVPVKPRTKRYKPASRVW 175


>ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like [Vitis vinifera]
          Length = 317

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 65/186 (34%), Positives = 82/186 (44%), Gaps = 19/186 (10%)
 Frame = +3

Query: 6   CMEARALKKSLLSEVAMKTTTAQQVFFDDVWCVTNVG--------CXXXXXXXXXXXXXX 161
           C+E+RALK+SL  E AMKTT   QV +DDV C   V                        
Sbjct: 4   CIESRALKESLRREAAMKTTP--QVLYDDVLCGAGVNGVSGEDFSVDDLFDFSNGGLGVG 61

Query: 162 XXXESFIKENEEKXXXXXXXXXXXXXXXXXXXXASLT------AADELTVPVDEMENLEW 323
              E   +E EEK                     S T      +A  L VP D++E+LEW
Sbjct: 62  FEGEEEEEEEEEKDSFSWSSLERVDDDNSNSSSFSGTGDFESLSAGGLAVPADDLEHLEW 121

Query: 324 LSQFVDD-SVSGMSLLCSA--GKFSGHRSEPDRKRFTVLD--LPNPVHKKPRTKRFRTSS 488
           LS FVDD S S +SLLC A  G     R E + +   +     P P+  KPR+KR R+S 
Sbjct: 122 LSHFVDDSSASELSLLCPAVTGNSPSKRCEEEPRPALLRTPLFPTPLPAKPRSKRHRSSG 181

Query: 489 KAWFHG 506
           +AW  G
Sbjct: 182 RAWAFG 187


>emb|CBI38005.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 62/172 (36%), Positives = 79/172 (45%), Gaps = 5/172 (2%)
 Frame = +3

Query: 6   CMEARALKKSLLSEVAMKTTTAQQVFFDDVWCVTNVGCXXXXXXXXXXXXXXXXXESFIK 185
           C+E+RALK+SL  E AMKTT   QV +DDV C   V                   + F  
Sbjct: 62  CIESRALKESLRREAAMKTTP--QVLYDDVLCGAGVN--------GVSGEDFSVDDLFDF 111

Query: 186 ENEEKXXXXXXXXXXXXXXXXXXXXASLTAADELTVPVDEMENLEWLSQFVDD-SVSGMS 362
            N                        SL+A   L VP D++E+LEWLS FVDD S S +S
Sbjct: 112 SNGGLGVGVDDDNSNSSSFSGTGDFESLSAGG-LAVPADDLEHLEWLSHFVDDSSASELS 170

Query: 363 LLCSA--GKFSGHRSEPDRKRFTVLD--LPNPVHKKPRTKRFRTSSKAWFHG 506
           LLC A  G     R E + +   +     P P+  KPR+KR R+S +AW  G
Sbjct: 171 LLCPAVTGNSPSKRCEEEPRPALLRTPLFPTPLPAKPRSKRHRSSGRAWAFG 222


>ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|222850171|gb|EEE87718.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
 Frame = +3

Query: 9   MEARALKKSLLSEVAMKTTTAQQVFFDDVWCVTNVGCXXXXXXXXXXXXXXXXX----ES 176
           +E RALK SLL E+  KTT+ +Q F +D   +   G                      + 
Sbjct: 5   VEERALKSSLLRELDTKTTS-EQAFCEDFLALNTPGVVSFDQDFSVDCFLDFSNGEFNDG 63

Query: 177 FIKENEEKXXXXXXXXXXXXXXXXXXXXASLT---AADELTVPVDEMENLEWLSQFVDDS 347
           +++E EE+                    +S +    A EL VP D++  LEW+S FVDDS
Sbjct: 64  YVQEQEEEKDSISVSSQDRVDDDFNSNSSSFSDSFLASELAVPTDDIAELEWVSHFVDDS 123

Query: 348 VSGMSLLCSAGKFSG-----HRSEPDRK---RFTVLDLPNPVHKKPRTKRFRTSSKAWFH 503
           VS +SLL  A K S      +R EP+ K     T    P+ V  K RTKR R + + W  
Sbjct: 124 VSDVSLLVPACKGSSKRHAKNRFEPETKPTFAKTSCLFPSRVPSKARTKRSRPTGRTWSA 183

Query: 504 G 506
           G
Sbjct: 184 G 184


Top