BLASTX nr result

ID: Cnidium21_contig00023416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023416
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAC98494.1| AG-motif binding protein-4 [Nicotiana tabacum]         95   7e-18
emb|CBI38005.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like ...    66   3e-09
gb|ADL36694.1| GATA domain class transcription factor [Malus x d...    57   1e-06

>dbj|BAC98494.1| AG-motif binding protein-4 [Nicotiana tabacum]
          Length = 326

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 67/178 (37%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
 Frame = +3

Query: 9   MEARALKSSLLSEVAMKTTAQQVFFDDVWCVTNVGCXXXXXXXXXXXXXXXXXE----SF 176
           +EARALKSS LS++AMKT+ QQVF DD+WCV  +                   +      
Sbjct: 4   IEARALKSSFLSDMAMKTS-QQVFLDDIWCVAGINNVPSDDFSVDDLLDFSDKDFKDGQS 62

Query: 177 IKXXXXXXXXXXXXXXXXXXXXXXXXFASLTA-AAELTVPVDEMENLEWLSQFVDDSVSG 353
           ++                        F+ + + + EL VPVDE+ENLEWLSQFVDDS S 
Sbjct: 63  LQELHEDDEKDSFSGSSQHRNSQVSNFSCMDSFSGELPVPVDELENLEWLSQFVDDSTSE 122

Query: 354 MSLLCSAGKFSG-------HRSE----PDRNRFTVLDLPNPVHKKPRTKRFRTSSKAW 494
            SLLC AG F          RSE    P   +  V   P PV +KPRT R R + + W
Sbjct: 123 FSLLCPAGSFKDKTGGFQVSRSEPVVRPVVQKLKVPCFPLPVVQKPRTYRSRPAGRKW 180


>emb|CBI38005.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 62/168 (36%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
 Frame = +3

Query: 6   CMEARALKSSLLSEVAMKTTAQQVFFDDVWCVTNVGCXXXXXXXXXXXXXXXXXESFIKX 185
           C+E+RALK SL  E AMKTT Q V +DDV C   V                   + F   
Sbjct: 62  CIESRALKESLRREAAMKTTPQ-VLYDDVLCGAGVN--------GVSGEDFSVDDLFDFS 112

Query: 186 XXXXXXXXXXXXXXXXXXXXXXXFASLTAAAELTVPVDEMENLEWLSQFVDD-SVSGMSL 362
                                  F SL+A   L VP D++E+LEWLS FVDD S S +SL
Sbjct: 113 NGGLGVGVDDDNSNSSSFSGTGDFESLSAGG-LAVPADDLEHLEWLSHFVDDSSASELSL 171

Query: 363 LCSA--GKFSGHR--SEPDRNRFTVLDLPNPVHKKPRTKRFRTSSKAW 494
           LC A  G     R   EP          P P+  KPR+KR R+S +AW
Sbjct: 172 LCPAVTGNSPSKRCEEEPRPALLRTPLFPTPLPAKPRSKRHRSSGRAW 219


>ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|222850171|gb|EEE87718.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 58/182 (31%), Positives = 75/182 (41%), Gaps = 17/182 (9%)
 Frame = +3

Query: 9   MEARALKSSLLSEVAMKTTAQQVFFDDVWCVTNVGCXXXXXXXXXXXXXXXXXESFIKXX 188
           +E RALKSSLL E+  KTT++Q F +D   +   G                    F    
Sbjct: 5   VEERALKSSLLRELDTKTTSEQAFCEDFLALNTPGVVSFDQDFSVDCFLDFSNGEFNDGY 64

Query: 189 XXXXXXXXXXXXXXXXXXXXXXFASLTA-------AAELTVPVDEMENLEWLSQFVDDSV 347
                                 F S ++       A+EL VP D++  LEW+S FVDDSV
Sbjct: 65  VQEQEEEKDSISVSSQDRVDDDFNSNSSSFSDSFLASELAVPTDDIAELEWVSHFVDDSV 124

Query: 348 SGMSLLCSAGKFSGHRSEPDRNRF----------TVLDLPNPVHKKPRTKRFRTSSKAWF 497
           S +SLL  A K S  R    +NRF          T    P+ V  K RTKR R + + W 
Sbjct: 125 SDVSLLVPACKGSSKRHA--KNRFEPETKPTFAKTSCLFPSRVPSKARTKRSRPTGRTWS 182

Query: 498 PG 503
            G
Sbjct: 183 AG 184


>ref|XP_002274872.1| PREDICTED: GATA transcription factor 5-like [Vitis vinifera]
          Length = 317

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 61/186 (32%), Positives = 78/186 (41%), Gaps = 23/186 (12%)
 Frame = +3

Query: 6   CMEARALKSSLLSEVAMKTTAQQVF------------------FDDVWCVTNVGCXXXXX 131
           C+E+RALK SL  E AMKTT Q ++                   DD++  +N G      
Sbjct: 4   CIESRALKESLRREAAMKTTPQVLYDDVLCGAGVNGVSGEDFSVDDLFDFSNGGLGVGFE 63

Query: 132 XXXXXXXXXXXXESFIKXXXXXXXXXXXXXXXXXXXXXXXXFASLTAAAELTVPVDEMEN 311
                       +SF                          F SL+A   L VP D++E+
Sbjct: 64  GEEEEEEEEEK-DSF---SWSSLERVDDDNSNSSSFSGTGDFESLSAGG-LAVPADDLEH 118

Query: 312 LEWLSQFVDD-SVSGMSLLCSA--GKFSGHR--SEPDRNRFTVLDLPNPVHKKPRTKRFR 476
           LEWLS FVDD S S +SLLC A  G     R   EP          P P+  KPR+KR R
Sbjct: 119 LEWLSHFVDDSSASELSLLCPAVTGNSPSKRCEEEPRPALLRTPLFPTPLPAKPRSKRHR 178

Query: 477 TSSKAW 494
           +S +AW
Sbjct: 179 SSGRAW 184


>gb|ADL36694.1| GATA domain class transcription factor [Malus x domestica]
          Length = 331

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/91 (39%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
 Frame = +3

Query: 273 AAELTVPVDEMENLEWLSQFVDDSVSGMSLLCSAGKFSGHRSEPDRNRFTVLDLP----- 437
           A+EL+VP D++ENLEWLS FV+DS S  +    AG       +P   +   L+ P     
Sbjct: 102 ASELSVPADDLENLEWLSHFVEDSFSEFTTALPAGFLP---EKPKSEKRPDLETPFPEKP 158

Query: 438 ---NPVHKKPRTKRFRTSSKAWFPGLLLLTE 521
               PV  K R+KR RT  + W  G   LTE
Sbjct: 159 CFKTPVPAKARSKRRRTGGRVWSLGSPSLTE 189


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