BLASTX nr result

ID: Cnidium21_contig00023409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023409
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310075.1| predicted protein [Populus trichocarpa] gi|2...    96   1e-17
ref|XP_002306381.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-13
ref|NP_196441.1| uncharacterized protein [Arabidopsis thaliana] ...    74   7e-11
ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160...    72   4e-10
ref|XP_002873348.1| predicted protein [Arabidopsis lyrata subsp....    70   8e-10

>ref|XP_002310075.1| predicted protein [Populus trichocarpa] gi|222852978|gb|EEE90525.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 89/299 (29%), Positives = 131/299 (43%), Gaps = 16/299 (5%)
 Frame = +2

Query: 146 SSMACFGCSRRA--SEKKLPQDIEQDLVKTGRLTXXXXXNSLISWPRLWTKKSDAKTVPV 319
           S + CFG SR+A  S  K P   +Q                L SW  +  K S AKTVP+
Sbjct: 19  SFLGCFGFSRKAIPSPTKKPTKKKQ--------------TGLFSWSWVCVKNSGAKTVPI 64

Query: 320 DISMSGSLDPISKSHSVKLDKNNIVSSKKNGLPIGVNAINSYKKRLGTV------KEIIL 481
           D ++ GS D  S +   K  K           P  V++  + K+  G        ++IIL
Sbjct: 65  DSTVPGS-DRTSGASKPKRQKPLTKHETPRQTPARVSSDRAPKEMPGETWYRSSEQDIIL 123

Query: 482 ESREISHLNSLAKEDKIYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTTRVDQTSLP 661
           E+ ++S      K+                                   V+      S P
Sbjct: 124 ENGKLSDHVETTKDATCKKRLSFCRKVDAIRTGTNQPGSPEVKEKPIRTVSIITRSESSP 183

Query: 662 PQKKAKLATRENGNDIVTH-------EKNDSKEALDSNS-MIGLSVIVVILALMLFLGKL 817
            Q   + AT+       +        ++ND +    S+   +G+S+I++ L LML  GKL
Sbjct: 184 SQPVERPATKTPNTAARSRFTIKRPRKENDHQNGKKSDHPFVGMSIIIMTLVLMLAWGKL 243

Query: 818 YAILYTSAWFYMIPRLRTAVDSNDIVSNGLDSNVPDLNSDEHKKRVVLEGLLQRNQRNI 994
            AIL TSAWFY +PRLR    S D VSNGL S     +S+E+KK+VV++G L+R++R+I
Sbjct: 244 CAILCTSAWFYFVPRLR----SEDSVSNGLISAESFYDSEEYKKKVVMDGFLERSRRSI 298


>ref|XP_002306381.1| predicted protein [Populus trichocarpa] gi|222855830|gb|EEE93377.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 45/126 (35%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
 Frame = +2

Query: 629 VTTRVDQTSLPPQKKAKLATRENGNDIVT---HEKNDSKEALDSNSMIGLSVIVVILALM 799
           +T      SLP +K A +      + ++    H++ND       + ++G+S++V+ L +M
Sbjct: 193 ITRSTSSPSLPHEKSATVPNTLGRSWVMAGKPHKENDRPNGKKLDPLVGMSIVVMTLMIM 252

Query: 800 LFLGKLYAILYTSAWFYMIPRLRTAVDSNDIVSNGLDSNVPDLNSDEHKKRVVLEGLLQR 979
           L  GKL AIL  SAWFY +PRL     S D V NG      +L+S+++KK+VVLEG L+R
Sbjct: 253 LLWGKLCAILCASAWFYFVPRL----ISEDDVKNGSIQREFNLDSEDYKKKVVLEGFLER 308

Query: 980 NQRNII 997
            + +++
Sbjct: 309 KRHSVL 314


>ref|NP_196441.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8346561|emb|CAB93725.1| putative protein [Arabidopsis
           thaliana] gi|26449453|dbj|BAC41853.1| unknown protein
           [Arabidopsis thaliana] gi|111074174|gb|ABH04460.1|
           At5g08240 [Arabidopsis thaliana]
           gi|332003890|gb|AED91273.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 258

 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 39/108 (36%), Positives = 65/108 (60%)
 Frame = +2

Query: 665 QKKAKLATRENGNDIVTHEKNDSKEALDSNSMIGLSVIVVILALMLFLGKLYAILYTSAW 844
           ++ + +++R    D+      +       + +IG+S+I++ L +ML  G+L AIL TSAW
Sbjct: 148 ERISSISSRYGKPDLKPTRSRNGSRVKPFDPVIGISIIILTLMIMLVWGRLCAILCTSAW 207

Query: 845 FYMIPRLRTAVDSNDIVSNGLDSNVPDLNSDEHKKRVVLEGLLQRNQR 988
            Y++PR+R A        NG  ++VPDLNS+ +K++VVL+G L R  R
Sbjct: 208 CYVLPRVRDAAALAKRKRNG-SASVPDLNSESYKRKVVLDGFLGRQNR 254


>ref|XP_003534675.1| PREDICTED: uncharacterized protein At5g23160-like [Glycine max]
          Length = 253

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 4/83 (4%)
 Frame = +2

Query: 758 MIGLSVIVVILALMLFLGKLYAILYTSAWFYMIPRLRTA----VDSNDIVSNGLDSNVPD 925
           ++G+SV+VV L +MLF G+L AIL TSAW Y  PR R +     D  D+ +    S   D
Sbjct: 172 VVGMSVLVVTLVIMLFWGRLCAILCTSAWLYCTPRFRKSGGYVNDDEDLQTT--KSKEVD 229

Query: 926 LNSDEHKKRVVLEGLLQRNQRNI 994
           L+S+E+KK+V++EGLL RN R +
Sbjct: 230 LDSEEYKKKVIMEGLLGRNHRTM 252


>ref|XP_002873348.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319185|gb|EFH49607.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 252

 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 40/102 (39%), Positives = 60/102 (58%)
 Frame = +2

Query: 683 ATRENGNDIVTHEKNDSKEALDSNSMIGLSVIVVILALMLFLGKLYAILYTSAWFYMIPR 862
           +TR   +D+      +       + +IG+S+I++ L +ML  G+L AIL TSAW Y++PR
Sbjct: 149 STRYLKSDLKPTRSRNGSRVKPFDPVIGISIIILTLMIMLVWGRLCAILCTSAWCYVLPR 208

Query: 863 LRTAVDSNDIVSNGLDSNVPDLNSDEHKKRVVLEGLLQRNQR 988
           +R A        NG  S+V DLNS  +K++VVL+G L R  R
Sbjct: 209 VRDAAALAKRKRNG--SDVGDLNSQSYKRKVVLDGFLGRQNR 248


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