BLASTX nr result

ID: Cnidium21_contig00023330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023330
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera]   280   4e-73
ref|XP_002516406.1| hypothetical protein RCOM_1424400 [Ricinus c...   276   4e-72
ref|XP_002332131.1| predicted protein [Populus trichocarpa] gi|2...   275   1e-71
ref|XP_002321798.1| predicted protein [Populus trichocarpa] gi|2...   272   9e-71
ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein lig...   234   3e-59

>emb|CAN67079.1| hypothetical protein VITISV_004500 [Vitis vinifera]
          Length = 1049

 Score =  280 bits (715), Expect = 4e-73
 Identities = 154/263 (58%), Positives = 189/263 (71%), Gaps = 11/263 (4%)
 Frame = -1

Query: 758 MASLQHLLSEEGFTDTKFVKNHKKVRYRG----------RTASEEAIALPIYICHDLKSI 609
           MASL  LL EEGF  TK   NH K   +           R A +++IALPIYICHD ++ 
Sbjct: 1   MASLHDLLVEEGFERTK---NHPKTSRKPPLLSKPNRDPRLARDDSIALPIYICHDRRNF 57

Query: 608 DFSKNKNDKAISRKGSSIFXXXXXXXXXXXSLPRSVTDGVRKKTDEPALDEVAIRAVISI 429
              K+K DKAI+R    +            +  +S+      + D PA+DEVAIRAVISI
Sbjct: 58  HSVKHKADKAITRNAPGLLSSKRVSSDSERANSQSLGGSEGARRDGPAIDEVAIRAVISI 117

Query: 428 LSGYVGQYLRDEEFRRTLRQRCYSCFVRKKKDSDNGKIFANIELGIESIERLVESS-GTK 252
           LSGY+G+YL+DE FR ++R++CY+C   +KKDSDNG +FAN+ELGIESIE+LV  S GT 
Sbjct: 118 LSGYIGRYLKDETFRESVREKCYACLESRKKDSDNG-VFANMELGIESIEQLVLGSPGTH 176

Query: 251 KDLRMKLLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLYLSVVYKLEKNDRIS 72
            +LRMK LRNSI LL++VASLNS++SRNGST G PNSHLSACAQLYLS+VYKLEKNDRIS
Sbjct: 177 MELRMKSLRNSIRLLSIVASLNSETSRNGSTCGIPNSHLSACAQLYLSIVYKLEKNDRIS 236

Query: 71  ARHVLQVFCDSPFLAREHLLPEL 3
           ARH+LQVFCD+PFLAR  LLP+L
Sbjct: 237 ARHLLQVFCDAPFLARTDLLPDL 259


>ref|XP_002516406.1| hypothetical protein RCOM_1424400 [Ricinus communis]
           gi|223544441|gb|EEF45961.1| hypothetical protein
           RCOM_1424400 [Ricinus communis]
          Length = 925

 Score =  276 bits (707), Expect = 4e-72
 Identities = 145/257 (56%), Positives = 190/257 (73%), Gaps = 6/257 (2%)
 Frame = -1

Query: 755 ASLQHLLSEEGFTDTKFVKNHKKVRYRGRTASEEAIALPIYICHDLKSIDFSKNKNDKAI 576
           +SL  LLSEEG   ++F+++ K+ + R     +E+I LPIYICHD K++D  K+K D+A 
Sbjct: 3   SSLLKLLSEEGLVHSEFLRSQKQAKLR-----DESIKLPIYICHDQKNLDSFKHKTDRAS 57

Query: 575 SRKGSSIFXXXXXXXXXXXSLPRSVTDGVRKKT------DEPALDEVAIRAVISILSGYV 414
            RKGSS+F              ++  D VRK        DEPA+DEVA+R VISILSGY+
Sbjct: 58  YRKGSSVFSSK-----------QASPDLVRKSKPLSSTEDEPAIDEVAVRTVISILSGYI 106

Query: 413 GQYLRDEEFRRTLRQRCYSCFVRKKKDSDNGKIFANIELGIESIERLVESSGTKKDLRMK 234
           G+Y++D  F++ +R +C SC VRK+KD D+  IFA +ELG+ESIE+LV+  GT+K+LR+K
Sbjct: 107 GRYIKDSSFQKMIRNKCNSCLVRKRKDLDDA-IFAKMELGMESIEKLVQEQGTRKELRIK 165

Query: 233 LLRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLYLSVVYKLEKNDRISARHVLQ 54
            LR SI L+++VASLNSK SRNGST G PNSH+SACAQLYLS+ YKLE+N+RISARH+LQ
Sbjct: 166 SLRISIQLMSIVASLNSKKSRNGSTCGIPNSHISACAQLYLSIAYKLERNERISARHLLQ 225

Query: 53  VFCDSPFLAREHLLPEL 3
           VF DSPFLAR HLLP+L
Sbjct: 226 VFSDSPFLARTHLLPDL 242


>ref|XP_002332131.1| predicted protein [Populus trichocarpa] gi|222875181|gb|EEF12312.1|
           predicted protein [Populus trichocarpa]
          Length = 980

 Score =  275 bits (703), Expect = 1e-71
 Identities = 144/256 (56%), Positives = 185/256 (72%), Gaps = 4/256 (1%)
 Frame = -1

Query: 758 MASLQHLLSEEGFTDTKFVKNHKKVRYRGRTASEEAIALPIYICHDLKSIDFSKNKNDKA 579
           MASL  +LSEEGF   KF+++  ++     T  EE++ LPI+ICHD K     K K D  
Sbjct: 1   MASLHQMLSEEGFEHRKFLRSRDRL-----TRPEESVILPIHICHDQKRFQSPKQKTDMG 55

Query: 578 ISRKGSSIFXXXXXXXXXXXSLPRSVTDGVRKKT----DEPALDEVAIRAVISILSGYVG 411
            +RKGSSI                S T+ ++ K+    +EPA+D +AIRAV+SILSGY+G
Sbjct: 56  STRKGSSISSRRVS----------SDTERLQSKSLLKGEEPAIDVIAIRAVVSILSGYIG 105

Query: 410 QYLRDEEFRRTLRQRCYSCFVRKKKDSDNGKIFANIELGIESIERLVESSGTKKDLRMKL 231
           +Y++D  FR  +R++C SC VR+ K SD+G IF N+E+G+ESIE+LVE  GT+K+++M+ 
Sbjct: 106 RYIKDVSFREVIREKCNSCLVRRSKGSDDG-IFVNMEVGMESIEKLVEEKGTRKEVKMES 164

Query: 230 LRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLYLSVVYKLEKNDRISARHVLQV 51
           L+NSI LL +VASLNSK SR GST G PNSHLSACAQLYLS+VYKLEKNDRISARH+L V
Sbjct: 165 LKNSIQLLNIVASLNSKKSRKGSTCGVPNSHLSACAQLYLSIVYKLEKNDRISARHLLYV 224

Query: 50  FCDSPFLAREHLLPEL 3
           FCDSPFLAR HLLP+L
Sbjct: 225 FCDSPFLARTHLLPDL 240


>ref|XP_002321798.1| predicted protein [Populus trichocarpa] gi|222868794|gb|EEF05925.1|
           predicted protein [Populus trichocarpa]
          Length = 961

 Score =  272 bits (695), Expect = 9e-71
 Identities = 141/253 (55%), Positives = 181/253 (71%), Gaps = 1/253 (0%)
 Frame = -1

Query: 758 MASLQHLLSEEGFTDTKFVKNHKKVRYRGRTAS-EEAIALPIYICHDLKSIDFSKNKNDK 582
           MASL  LL+EEGF    F++N  +V+ R R    EE++ LPI++CHD K    SK K DK
Sbjct: 1   MASLNQLLAEEGFEHRSFLRNRAQVKPRDRLIRPEESVILPIHVCHDQKRPHSSKKKTDK 60

Query: 581 AISRKGSSIFXXXXXXXXXXXSLPRSVTDGVRKKTDEPALDEVAIRAVISILSGYVGQYL 402
           A +RKGSSIF              +S+  G     ++PA+DE+AIRAV+SILSGY+G+Y 
Sbjct: 61  ASTRKGSSIFSSRRVSSDTERLQSKSLLRG-----EDPAIDEIAIRAVVSILSGYIGRYT 115

Query: 401 RDEEFRRTLRQRCYSCFVRKKKDSDNGKIFANIELGIESIERLVESSGTKKDLRMKLLRN 222
           +D  FR  +R++C SC V +   SD+G IF N+E G+ESIE+LVE   T+K+++++ L+N
Sbjct: 116 KDVSFREMIREKCNSCLVGRSMGSDDG-IFGNMESGMESIEKLVEEQATRKEVKVESLKN 174

Query: 221 SISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLYLSVVYKLEKNDRISARHVLQVFCD 42
            I LL +VASLNSK S NGST G PNSHLSACAQLYLS+VYKLEKNDR SARH+L VFCD
Sbjct: 175 PIQLLNIVASLNSKKSGNGSTCGVPNSHLSACAQLYLSIVYKLEKNDRTSARHLLHVFCD 234

Query: 41  SPFLAREHLLPEL 3
           +PFLAR HLLP+L
Sbjct: 235 APFLARTHLLPDL 247


>ref|XP_004145484.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus] gi|449527759|ref|XP_004170877.1| PREDICTED:
           putative E3 ubiquitin-protein ligase LIN-like [Cucumis
           sativus]
          Length = 863

 Score =  234 bits (596), Expect = 3e-59
 Identities = 127/256 (49%), Positives = 179/256 (69%), Gaps = 4/256 (1%)
 Frame = -1

Query: 758 MASLQHLLSEEGFTDTKFVKNHKKVRYRGR--TASEEAIALPIYICHDLKSIDFSKNKND 585
           MASLQ LL+ EGF  + +    K  R +GR  TA ++++ LPIYICHD K+ID SK K+D
Sbjct: 1   MASLQELLTREGFEGSNYPSTRKLSRPKGRSRTAPDDSVTLPIYICHDKKTIDSSKKKHD 60

Query: 584 KAISRKGSSIFXXXXXXXXXXXSLPRSVTDGVR-KKTDEPALDEVAIRAVISILSGYVGQ 408
           K + R GSS++               SV++ +  K  +EPA+DE+AIRAV+SILSGYVG+
Sbjct: 61  KPLVRNGSSVYSSKRVG---------SVSETLPCKSMEEPAIDEIAIRAVVSILSGYVGR 111

Query: 407 YLRDEEFRRTLRQRCYSCFVRKKKDSDNGKIFANIELGIESIERLVESS-GTKKDLRMKL 231
           Y +DE FR  +R++C  C +RK  + ++G I +N+E+G++S++RLVE   G +++LR+K 
Sbjct: 112 YSKDENFREIVRKKCNPCLIRKG-EMESG-ICSNLEMGMKSVDRLVEEGHGNERELRIKA 169

Query: 230 LRNSISLLTVVASLNSKSSRNGSTSGTPNSHLSACAQLYLSVVYKLEKNDRISARHVLQV 51
            RNSI LL +V  + S  S   ST    +SHLSACAQLYL++V K+EKN+R+SA+H+LQV
Sbjct: 170 SRNSIGLLNMV--ITSLDSAKNSTKNGAHSHLSACAQLYLAIVNKIEKNERVSAKHLLQV 227

Query: 50  FCDSPFLAREHLLPEL 3
           FCDSP+ AR HLLP+L
Sbjct: 228 FCDSPYFARTHLLPDL 243


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