BLASTX nr result

ID: Cnidium21_contig00023324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023324
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880951.1| nodulin family protein [Arabidopsis lyrata s...    58   1e-06
ref|NP_180379.1| major facilitator protein [Arabidopsis thaliana...    58   1e-06

>ref|XP_002880951.1| nodulin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326790|gb|EFH57210.1| nodulin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 573

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
 Frame = +3

Query: 171 LTLFIMVMTITQELVNNFPPIAYDASATXXXXXXXXXXXXXXXXXXYPWNHKRIPTI-PK 347
           L LF+M M I ++ V+ F   AY ASAT                    WN K++P   P 
Sbjct: 222 LALFLMAMNIAEKQVH-FSKAAYAASATICCVLLFVPLTVSVKQEIEVWNMKKLPIEEPS 280

Query: 348 DVKIEIPAQ---------STL*SEEMARNSCFSDILDKPPRGEDYTILHA 470
           +VK+E P +         + +  EE    SCF  +   PPRGEDYTIL A
Sbjct: 281 EVKVEKPKKELDLVQDKTAKVDGEEKETKSCFLTVFSPPPRGEDYTILQA 330


>ref|NP_180379.1| major facilitator protein [Arabidopsis thaliana]
           gi|4063746|gb|AAC98454.1| nodulin-like protein
           [Arabidopsis thaliana] gi|16209714|gb|AAL14413.1|
           At2g28120/F24D13.9 [Arabidopsis thaliana]
           gi|17064922|gb|AAL32615.1| nodulin-like protein
           [Arabidopsis thaliana] gi|20259958|gb|AAM13326.1|
           nodulin-like protein [Arabidopsis thaliana]
           gi|330252988|gb|AEC08082.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 577

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/110 (35%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
 Frame = +3

Query: 171 LTLFIMVMTITQELVNNFPPIAYDASATXXXXXXXXXXXXXXXXXXYPWNHKRIPTI-PK 347
           L LF+M M I ++ V+ F   AY ASAT                    WN  ++P   P 
Sbjct: 222 LALFLMAMNIAEKQVH-FSKAAYAASATICCALLFVPLTVSVKQELEVWNMMKLPIEEPS 280

Query: 348 DVKIEIPAQ---------STL*SEEMARNSCFSDILDKPPRGEDYTILHA 470
           +VK+E P +         + +  EE    SCFS +   PPRGEDYTIL A
Sbjct: 281 EVKVEKPKKELDLDQDKAAKVNGEEKETKSCFSTVFSPPPRGEDYTILQA 330


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