BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023258
         (1813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi...   694   0.0  
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,...   666   0.0  
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi...   659   0.0  
ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|2...   659   0.0  
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar...   648   0.0  

>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Vitis vinifera]
            gi|297744374|emb|CBI37344.3| unnamed protein product
            [Vitis vinifera]
          Length = 497

 Score =  694 bits (1791), Expect = 0.0
 Identities = 349/481 (72%), Positives = 392/481 (81%), Gaps = 21/481 (4%)
 Frame = -2

Query: 1785 MASLSGPTTPFPPPINRRPETQPXXXXXXXXXXXXXXXXXKVMVNN-------------- 1648
            M SLS P+ P P   NRRP + P                     N               
Sbjct: 1    MTSLSSPSPPLPQAFNRRPASAPETVRSKPSSSPSPTETTSAGRNRRTGVVKEKEREERE 60

Query: 1647 -------KIASQKAISIILRREATKSVIEKKRGPTNSKKLLPRTVLEALHERITALRWES 1489
                   KIAS+KAIS+ILRREATK+VIEKKRGP NSKKLLPRTVLEALHERITALRWES
Sbjct: 61   RREEVALKIASKKAISVILRREATKAVIEKKRGPNNSKKLLPRTVLEALHERITALRWES 120

Query: 1488 ALKVFELLQEQLWYRPNSGIYVKLIVMLGKCKQPEKAHSLFQAMVDEGCAVNVESYTALL 1309
            ALKVFELL+EQLWYRPNSGIY+KLIVMLGKCKQPEKAH+LF AM+DEGC VN E+YTALL
Sbjct: 121  ALKVFELLREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALL 180

Query: 1308 SAYSRSGHLNKAFYLLEEMKNTSDCHPDVFTYSILIKSCLQVYAFEKVQYLLSDMTSRGI 1129
            SAYSRSG  +KAF LLE+MKNT DC PDV TYS+LIKSCLQV AF+KV  LLSDM ++GI
Sbjct: 181  SAYSRSGLFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGI 240

Query: 1128 KPNTITFNTLIDSYGKAKKFTQMESTLVEMLHQQEVEPDVWTMNSTLRAFGNSGQIEMME 949
            KPNT+T+NTLID+YGKAK+F +MESTL+EML + + EPDVWTMNSTLRAFG+SGQIE ME
Sbjct: 241  KPNTVTYNTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETME 300

Query: 948  KCYEKFQCAGIQPSIKTFNILLDSYGKTGNYEKMSAVMEYMEKYHFSWSLVTYNVVIDAF 769
            KCYEKFQ AGI+P+IKTFNILLDSYGK   YEKMSAVMEYM+KYHFSW++VTYNVVIDAF
Sbjct: 301  KCYEKFQSAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAF 360

Query: 768  GRAGDLKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKITGVLRFTENSDVTLDT 589
            GRAGDLKQME+LFRLM+SERIKP+CVTLCSLVRAYG+AGKAEKI GVLRF ENSDV LD 
Sbjct: 361  GRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDI 420

Query: 588  VFFNCLVDAYGMMGCVAEMQNVLEIMQRKGCKPDKITYRTMIKAYSMSNMTSQVKEFKAV 409
            VFFNCLVDAYG +GC AEM+ VLE+M++KGCKPDKITYRTMIKAY +  MTS  KE + +
Sbjct: 421  VFFNCLVDAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGL 480

Query: 408  L 406
            +
Sbjct: 481  M 481


>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 636

 Score =  666 bits (1719), Expect = 0.0
 Identities = 327/419 (78%), Positives = 373/419 (89%)
 Frame = -2

Query: 1656 VNNKIASQKAISIILRREATKSVIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKV 1477
            ++ KIAS+KAIS+ILRREATK++IEKKRGPTNSKKLLPRTVLEALHERITALRWESALKV
Sbjct: 82   MDRKIASRKAISVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKV 141

Query: 1476 FELLQEQLWYRPNSGIYVKLIVMLGKCKQPEKAHSLFQAMVDEGCAVNVESYTALLSAYS 1297
            FELL+EQ+WYRP SG+Y+KLIVMLGKCKQPEKAH LFQAM+ EGC V+ ESYTALLSAY 
Sbjct: 142  FELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYG 201

Query: 1296 RSGHLNKAFYLLEEMKNTSDCHPDVFTYSILIKSCLQVYAFEKVQYLLSDMTSRGIKPNT 1117
            RSG L+KAF LLEEMK   DC PDV TYSILIKSC+QV+AF+K + LLS+M S GI PNT
Sbjct: 202  RSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNT 261

Query: 1116 ITFNTLIDSYGKAKKFTQMESTLVEMLHQQEVEPDVWTMNSTLRAFGNSGQIEMMEKCYE 937
            IT+NTLID+YGKAK F +ME+TLV+ML QQ  EPDVWTMNSTLRAFG SGQIE MEKCYE
Sbjct: 262  ITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYE 321

Query: 936  KFQCAGIQPSIKTFNILLDSYGKTGNYEKMSAVMEYMEKYHFSWSLVTYNVVIDAFGRAG 757
            KFQ AGI+PSI TFN+LLDSYGK G+Y+KMSAVMEYM+KYH+SW+++TYN+VIDAFGRAG
Sbjct: 322  KFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAG 381

Query: 756  DLKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKITGVLRFTENSDVTLDTVFFN 577
            DLKQME+LFRLM+SERIKP+CVTLCSLVRAYG+A K EKI GVLRF ENSD+TLDTVFFN
Sbjct: 382  DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFN 441

Query: 576  CLVDAYGMMGCVAEMQNVLEIMQRKGCKPDKITYRTMIKAYSMSNMTSQVKEFKAVLAS 400
            CLVDAYG MGC AEM+ VL +M++KG +PDKITYRTMIKAYS   MT  VKE + + A+
Sbjct: 442  CLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDLEAA 500


>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
            chloroplastic-like [Glycine max]
          Length = 515

 Score =  659 bits (1701), Expect = 0.0
 Identities = 318/427 (74%), Positives = 377/427 (88%), Gaps = 6/427 (1%)
 Frame = -2

Query: 1659 MVNNKIASQKAISIILRREATKSVIEK------KRGPTNSKKLLPRTVLEALHERITALR 1498
            M N K+ASQKA+S+IL REATK++I+K      K+GP NSKKLLPRTVLEALHER+TALR
Sbjct: 77   MRNRKVASQKAVSVILWREATKAMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALR 136

Query: 1497 WESALKVFELLQEQLWYRPNSGIYVKLIVMLGKCKQPEKAHSLFQAMVDEGCAVNVESYT 1318
            WESALKVFELL EQ+WY+P++G+Y+KLIVMLGKCKQPEKAH LFQAMVDEGC ++ ESYT
Sbjct: 137  WESALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYT 196

Query: 1317 ALLSAYSRSGHLNKAFYLLEEMKNTSDCHPDVFTYSILIKSCLQVYAFEKVQYLLSDMTS 1138
            ALLSAYSRSG L+KAF LLEEMKNT  C PDV TYSIL+KSCLQV+AF+K+Q LLSDMT+
Sbjct: 197  ALLSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTN 256

Query: 1137 RGIKPNTITFNTLIDSYGKAKKFTQMESTLVEMLHQQEVEPDVWTMNSTLRAFGNSGQIE 958
            RGIKPNT+T+NTLID+YGKA+KF++MES LVEML  +  +PDVWTMNSTLRAFGN GQIE
Sbjct: 257  RGIKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIE 316

Query: 957  MMEKCYEKFQCAGIQPSIKTFNILLDSYGKTGNYEKMSAVMEYMEKYHFSWSLVTYNVVI 778
             MEKCYEKFQ AGIQP+++TFNILLDSYGK  +Y+KMSAVMEYM+KYH+SW++VT+N+VI
Sbjct: 317  TMEKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVI 376

Query: 777  DAFGRAGDLKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKITGVLRFTENSDVT 598
            DAFG+AGDLKQME+LFRLM+SERIKP+CVTLCSLVRAY +AGK EKI+GVLRF ENSDV 
Sbjct: 377  DAFGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVL 436

Query: 597  LDTVFFNCLVDAYGMMGCVAEMQNVLEIMQRKGCKPDKITYRTMIKAYSMSNMTSQVKEF 418
            LDTVFFNCLVDAY  +GC+AEM+ VLE+M++ GCKPD +TYRTMIK Y+   M S  KE 
Sbjct: 437  LDTVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKEL 496

Query: 417  KAVLASL 397
            + +L ++
Sbjct: 497  RELLPTV 503


>ref|XP_002303044.1| predicted protein [Populus trichocarpa] gi|222844770|gb|EEE82317.1|
            predicted protein [Populus trichocarpa]
          Length = 485

 Score =  659 bits (1699), Expect = 0.0
 Identities = 327/432 (75%), Positives = 371/432 (85%)
 Frame = -2

Query: 1656 VNNKIASQKAISIILRREATKSVIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKV 1477
            VN KIASQKAIS+ILRREATK+VIEKKRGPTNSKKLLP+TVLEALHERITALRW SAL+V
Sbjct: 67   VNRKIASQKAISVILRREATKAVIEKKRGPTNSKKLLPQTVLEALHERITALRWASALEV 126

Query: 1476 FELLQEQLWYRPNSGIYVKLIVMLGKCKQPEKAHSLFQAMVDEGCAVNVESYTALLSAYS 1297
            FELL+EQLWYRP +G+YVKLIVMLGKCKQP+KAH LFQAM+DEGCAV  ESYTALLSAY 
Sbjct: 127  FELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYG 186

Query: 1296 RSGHLNKAFYLLEEMKNTSDCHPDVFTYSILIKSCLQVYAFEKVQYLLSDMTSRGIKPNT 1117
            RSG  +KAF ++EEMKNT DC PDV TYSILIKSCLQV+AF+KVQ LLSDM S GI+PNT
Sbjct: 187  RSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNT 246

Query: 1116 ITFNTLIDSYGKAKKFTQMESTLVEMLHQQEVEPDVWTMNSTLRAFGNSGQIEMMEKCYE 937
            +TF              +ME+TL+EML QQ+ EPDVWTMNST+RAFG SGQ+EMME CYE
Sbjct: 247  VTF-------------AEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYE 293

Query: 936  KFQCAGIQPSIKTFNILLDSYGKTGNYEKMSAVMEYMEKYHFSWSLVTYNVVIDAFGRAG 757
            KFQ AGI+P+IKTFNILLDSYGK GNY+KMSAVMEYM++YH+SW++VTYNVVIDAFGRAG
Sbjct: 294  KFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAG 353

Query: 756  DLKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKITGVLRFTENSDVTLDTVFFN 577
            DLKQME+LFRLM+SERIKP+CVTLCSLVRAY +AGK EKI  VLRF ENSDVTLDTVFFN
Sbjct: 354  DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFN 413

Query: 576  CLVDAYGMMGCVAEMQNVLEIMQRKGCKPDKITYRTMIKAYSMSNMTSQVKEFKAVLASL 397
            CLVDAYG + C AEM+ VLE+M+ KGCKPDK+TYRTMIKAYS+  MTS  K+ + +L S+
Sbjct: 414  CLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGSV 473

Query: 396  GSTSP*WKGPTF 361
              T    K P F
Sbjct: 474  EVTRSPKKKPDF 485


>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g48730, chloroplastic; Flags: Precursor
            gi|332008334|gb|AED95717.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 508

 Score =  648 bits (1671), Expect = 0.0
 Identities = 321/431 (74%), Positives = 373/431 (86%)
 Frame = -2

Query: 1653 NNKIASQKAISIILRREATKSVIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKVF 1474
            N KIAS+KAISIILRREATKS+IEKK+G   SKKLLPRTVLE+LHERITALRWESA++VF
Sbjct: 81   NTKIASRKAISIILRREATKSIIEKKKG---SKKLLPRTVLESLHERITALRWESAIQVF 137

Query: 1473 ELLQEQLWYRPNSGIYVKLIVMLGKCKQPEKAHSLFQAMVDEGCAVNVESYTALLSAYSR 1294
            ELL+EQLWY+PN GIYVKLIVMLGKCKQPEKAH LFQ M++EGC VN E YTAL+SAYSR
Sbjct: 138  ELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR 197

Query: 1293 SGHLNKAFYLLEEMKNTSDCHPDVFTYSILIKSCLQVYAFEKVQYLLSDMTSRGIKPNTI 1114
            SG  + AF LLE MK++ +C PDV TYSILIKS LQV+AF+KVQ LLSDM  +GI+PNTI
Sbjct: 198  SGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTI 257

Query: 1113 TFNTLIDSYGKAKKFTQMESTLVEMLHQQEVEPDVWTMNSTLRAFGNSGQIEMMEKCYEK 934
            T+NTLID+YGKAK F +MESTL++ML + + +PD WTMNSTLRAFG +GQIEMME CYEK
Sbjct: 258  TYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317

Query: 933  FQCAGIQPSIKTFNILLDSYGKTGNYEKMSAVMEYMEKYHFSWSLVTYNVVIDAFGRAGD 754
            FQ +GI+P+I+TFNILLDSYGK+GNY+KMSAVMEYM+KYH+SW++VTYNVVIDAFGRAGD
Sbjct: 318  FQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGD 377

Query: 753  LKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKITGVLRFTENSDVTLDTVFFNC 574
            LKQME+LFRLMQSERI P+CVTLCSLVRAYG+A KA+KI GVLRF ENSD+ LD VFFNC
Sbjct: 378  LKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNC 437

Query: 573  LVDAYGMMGCVAEMQNVLEIMQRKGCKPDKITYRTMIKAYSMSNMTSQVKEFKAVLASLG 394
            LVDAYG M   AEM+ VLE+M++KG KPDKITYRTM+KAY +S MT+ VKE   V+ S+G
Sbjct: 438  LVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVESVG 497

Query: 393  STSP*WKGPTF 361
                  K P F
Sbjct: 498  EAQVVVKKPDF 508