BLASTX nr result

ID: Cnidium21_contig00023241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023241
         (1096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFH68208.1| transcription factor bHLH [Vitis amurensis] gi|38...   323   4e-86
gb|AFR78197.1| transcription factor bHLH [Vitis vinifera] gi|404...   322   1e-85
ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Viti...   322   1e-85
emb|CBI19312.3| unnamed protein product [Vitis vinifera]              313   6e-83
ref|XP_002302353.1| predicted protein [Populus trichocarpa] gi|1...   313   6e-83

>gb|AFH68208.1| transcription factor bHLH [Vitis amurensis]
            gi|384157483|gb|AFH68209.1| transcription factor bHLH
            [Vitis amurensis]
          Length = 334

 Score =  323 bits (829), Expect = 4e-86
 Identities = 174/264 (65%), Positives = 198/264 (75%), Gaps = 10/264 (3%)
 Frame = -1

Query: 1096 PFGDD*AISAPEHTDSSNNMLDTPPFFPCQEEYSL---------LSXXXXXXXXXXXXAC 944
            PFGD+   S P+ TDSS    DTPPF P QE+Y           +              C
Sbjct: 75   PFGDE--FSTPQVTDSSYTKQDTPPF-PTQEDYPFPMMEEEEPAVHPGVDLHNMGLQATC 131

Query: 943  KMEPFQSPEVPSFNMGVSME-KRSKVKKLDGQPSKNLMAEXXXXXRLNDRLSMLRSVVPK 767
            K+EP QS E P FN+GV  E K  + KK++GQPSKNLMAE     RLNDRLSMLRSVVPK
Sbjct: 132  KVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPK 191

Query: 766  ISKMDRTSILGDTIDYMKELLEKINNLQEYNEIDEHHQPSLTSLFKDVKPNDVLIRNSPK 587
            ISKMDRTSILGDTIDYMKELLE+INNLQE NE+D   Q +L  +FKD+KPN++++RNSPK
Sbjct: 192  ISKMDRTSILGDTIDYMKELLERINNLQEENEVDSS-QLNLLGIFKDLKPNEIMVRNSPK 250

Query: 586  FNVERKDMDTRIEMCCATKPGLLLSTVTTLEALGLEIQQCVISCFNDFGMSASCSEEREQ 407
            F+VER++MDTRIE+CCA KPGLLLSTV TLEALGLEIQQCVISCFNDF M ASCSEE E+
Sbjct: 251  FDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEK 310

Query: 406  RGNTSSEEIKQALFRNAGYGGRCL 335
            R   SSEE+KQALFRNAGYGGRCL
Sbjct: 311  RTMVSSEELKQALFRNAGYGGRCL 334


>gb|AFR78197.1| transcription factor bHLH [Vitis vinifera]
            gi|404551202|gb|AFR78198.1| transcription factor bHLH
            [Vitis vinifera]
          Length = 334

 Score =  322 bits (825), Expect = 1e-85
 Identities = 173/264 (65%), Positives = 198/264 (75%), Gaps = 10/264 (3%)
 Frame = -1

Query: 1096 PFGDD*AISAPEHTDSSNNMLDTPPFFPCQEEYSL---------LSXXXXXXXXXXXXAC 944
            PFG++   S P+ TDSS    DTPPF P QE+Y           +              C
Sbjct: 75   PFGEE--FSTPQVTDSSYTKQDTPPF-PTQEDYPFPMMEEEEPAVHPGVDLHNMGLQATC 131

Query: 943  KMEPFQSPEVPSFNMGVSME-KRSKVKKLDGQPSKNLMAEXXXXXRLNDRLSMLRSVVPK 767
            K+EP QS E P FN+GV  E K  + KK++GQPSKNLMAE     RLNDRLSMLRSVVPK
Sbjct: 132  KVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPK 191

Query: 766  ISKMDRTSILGDTIDYMKELLEKINNLQEYNEIDEHHQPSLTSLFKDVKPNDVLIRNSPK 587
            ISKMDRTSILGDTIDYMKELLE+INNLQE NE+D   Q +L  +FKD+KPN++++RNSPK
Sbjct: 192  ISKMDRTSILGDTIDYMKELLERINNLQEENEVDSS-QLNLLGIFKDLKPNEIMVRNSPK 250

Query: 586  FNVERKDMDTRIEMCCATKPGLLLSTVTTLEALGLEIQQCVISCFNDFGMSASCSEEREQ 407
            F+VER++MDTRIE+CCA KPGLLLSTV TLEALGLEIQQCVISCFNDF M ASCSEE E+
Sbjct: 251  FDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEK 310

Query: 406  RGNTSSEEIKQALFRNAGYGGRCL 335
            R   SSEE+KQALFRNAGYGGRCL
Sbjct: 311  RTMVSSEELKQALFRNAGYGGRCL 334


>ref|XP_002285595.1| PREDICTED: transcription factor bHLH93 [Vitis vinifera]
          Length = 334

 Score =  322 bits (825), Expect = 1e-85
 Identities = 173/264 (65%), Positives = 197/264 (74%), Gaps = 10/264 (3%)
 Frame = -1

Query: 1096 PFGDD*AISAPEHTDSSNNMLDTPPFFPCQEEYSL---------LSXXXXXXXXXXXXAC 944
            PFGD+   S P+ TDSS    DTPPF P QE+Y           +              C
Sbjct: 75   PFGDE--FSTPQVTDSSYTKQDTPPF-PTQEDYPFPMMEEEEPAVHPGVDLHNMGLQATC 131

Query: 943  KMEPFQSPEVPSFNMGVSME-KRSKVKKLDGQPSKNLMAEXXXXXRLNDRLSMLRSVVPK 767
            K+EP QS E P FN+GV  E K  + KK++GQPSKNLMAE     RLNDRLSMLRSVVPK
Sbjct: 132  KVEPIQSTEFPVFNVGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPK 191

Query: 766  ISKMDRTSILGDTIDYMKELLEKINNLQEYNEIDEHHQPSLTSLFKDVKPNDVLIRNSPK 587
            ISKMDRTSILGDTIDYMKELLE+INNLQE NE+D   Q +L  +FKD+KPN++++RNSPK
Sbjct: 192  ISKMDRTSILGDTIDYMKELLERINNLQEENEVDSS-QLNLLGIFKDLKPNEIMVRNSPK 250

Query: 586  FNVERKDMDTRIEMCCATKPGLLLSTVTTLEALGLEIQQCVISCFNDFGMSASCSEEREQ 407
            F+VER++MDTRIE+CCA KPGLLLSTV TLEALGLEIQQCVISCFNDF M ASCSEE E+
Sbjct: 251  FDVERRNMDTRIEICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEK 310

Query: 406  RGNTSSEEIKQALFRNAGYGGRCL 335
            R   SSEE+KQ LFRNAGYGGRCL
Sbjct: 311  RTMVSSEELKQTLFRNAGYGGRCL 334


>emb|CBI19312.3| unnamed protein product [Vitis vinifera]
          Length = 295

 Score =  313 bits (801), Expect = 6e-83
 Identities = 167/251 (66%), Positives = 189/251 (75%), Gaps = 10/251 (3%)
 Frame = -1

Query: 1057 TDSSNNMLDTPPFFPCQEEYSL---------LSXXXXXXXXXXXXACKMEPFQSPEVPSF 905
            TDSS    DTPPF P QE+Y           +              CK+EP QS E P F
Sbjct: 47   TDSSYTKQDTPPF-PTQEDYPFPMMEEEEPAVHPGVDLHNMGLQATCKVEPIQSTEFPVF 105

Query: 904  NMGVSME-KRSKVKKLDGQPSKNLMAEXXXXXRLNDRLSMLRSVVPKISKMDRTSILGDT 728
            N+GV  E K  + KK++GQPSKNLMAE     RLNDRLSMLRSVVPKISKMDRTSILGDT
Sbjct: 106  NVGVCNEVKNKRTKKVEGQPSKNLMAERRRRKRLNDRLSMLRSVVPKISKMDRTSILGDT 165

Query: 727  IDYMKELLEKINNLQEYNEIDEHHQPSLTSLFKDVKPNDVLIRNSPKFNVERKDMDTRIE 548
            IDYMKELLE+INNLQE NE+D   Q +L  +FKD+KPN++++RNSPKF+VER++MDTRIE
Sbjct: 166  IDYMKELLERINNLQEENEVDSS-QLNLLGIFKDLKPNEIMVRNSPKFDVERRNMDTRIE 224

Query: 547  MCCATKPGLLLSTVTTLEALGLEIQQCVISCFNDFGMSASCSEEREQRGNTSSEEIKQAL 368
            +CCA KPGLLLSTV TLEALGLEIQQCVISCFNDF M ASCSEE E+R   SSEE+KQ L
Sbjct: 225  ICCAGKPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEELEKRTMVSSEELKQTL 284

Query: 367  FRNAGYGGRCL 335
            FRNAGYGGRCL
Sbjct: 285  FRNAGYGGRCL 295


>ref|XP_002302353.1| predicted protein [Populus trichocarpa] gi|118482108|gb|ABK92985.1|
            unknown [Populus trichocarpa] gi|222844079|gb|EEE81626.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  313 bits (801), Expect = 6e-83
 Identities = 170/272 (62%), Positives = 200/272 (73%), Gaps = 18/272 (6%)
 Frame = -1

Query: 1096 PFGDD*AI--------SAPEHTDSSNNMLDTPPFFPCQ----------EEYSLLSXXXXX 971
            PFGD+ +         SAP+ TDSS N LDTPPF P Q          EE  LL+     
Sbjct: 80   PFGDEFSAPQFTDEFSSAPQFTDSSYNTLDTPPF-PVQDDTPMSMMEDEELGLLANDQQN 138

Query: 970  XXXXXXXACKMEPFQSPEVPSFNMGVSMEKRSKVKKLDGQPSKNLMAEXXXXXRLNDRLS 791
                    CK+EP QSPEV +FN G+  E++ + KK++GQPSKNLMAE     RLNDRLS
Sbjct: 139  LQMQGT--CKVEPIQSPEVSAFNAGICPERKIRGKKMEGQPSKNLMAERRRRKRLNDRLS 196

Query: 790  MLRSVVPKISKMDRTSILGDTIDYMKELLEKINNLQEYNEIDEHHQPSLTSLFKDVKPND 611
            MLRS+VPKISKMDRTSILGDTIDYMKELLE+IN+LQ+  E+    +  + S+FKD KPN+
Sbjct: 197  MLRSIVPKISKMDRTSILGDTIDYMKELLERINSLQQEIEVGSE-ELKMISIFKDTKPNE 255

Query: 610  VLIRNSPKFNVERKDMDTRIEMCCATKPGLLLSTVTTLEALGLEIQQCVISCFNDFGMSA 431
            +++RNSPKF VER++ DTRI++CCATKPGLLLS+VTTLE LGLEIQQCVISCFNDF M A
Sbjct: 256  IVVRNSPKFEVERRNEDTRIDICCATKPGLLLSSVTTLETLGLEIQQCVISCFNDFTMQA 315

Query: 430  SCSEEREQRGNTSSEEIKQALFRNAGYGGRCL 335
            SCSEE EQR   SSE IKQALF+NAGYGGRCL
Sbjct: 316  SCSEELEQRTLISSEHIKQALFKNAGYGGRCL 347


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