BLASTX nr result

ID: Cnidium21_contig00023224 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023224
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284773.2| PREDICTED: coatomer subunit beta'-2-like [Vi...   162   3e-38
emb|CBI36167.3| unnamed protein product [Vitis vinifera]              162   3e-38
emb|CAN59846.1| hypothetical protein VITISV_004513 [Vitis vinifera]   162   3e-38
ref|NP_175645.1| coatomer subunit beta'-2 [Arabidopsis thaliana]...   161   4e-38
ref|NP_001185203.1| coatomer subunit beta'-2 [Arabidopsis thalia...   161   4e-38

>ref|XP_002284773.2| PREDICTED: coatomer subunit beta'-2-like [Vitis vinifera]
          Length = 952

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -3

Query: 368  RDDLERANQILSSIPRDQLNSVAHFLESRGMIEDALDVATDSDYRFELAIQLGKLEIAQE 189
            R DLERAN++L SIP++  NSVA FLESRGMIEDAL+VATD DYRFELA+QLG+LE+A++
Sbjct: 649  RGDLERANELLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAMQLGRLEVAKD 708

Query: 188  IAGVAQSESKWKQLGALAMSTGMLEMAEECLKHAKDXXXXXXXXXXXGDAEEILKLASLA 9
            IA   QSESKWKQLG LAMSTG LEMAEECLKHA D           GDA+ I KLASLA
Sbjct: 709  IATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSGLLLLYSSLGDADGISKLASLA 768

Query: 8    KE 3
            KE
Sbjct: 769  KE 770


>emb|CBI36167.3| unnamed protein product [Vitis vinifera]
          Length = 933

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -3

Query: 368 RDDLERANQILSSIPRDQLNSVAHFLESRGMIEDALDVATDSDYRFELAIQLGKLEIAQE 189
           R DLERAN++L SIP++  NSVA FLESRGMIEDAL+VATD DYRFELA+QLG+LE+A++
Sbjct: 626 RGDLERANELLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAMQLGRLEVAKD 685

Query: 188 IAGVAQSESKWKQLGALAMSTGMLEMAEECLKHAKDXXXXXXXXXXXGDAEEILKLASLA 9
           IA   QSESKWKQLG LAMSTG LEMAEECLKHA D           GDA+ I KLASLA
Sbjct: 686 IATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSGLLLLYSSLGDADGISKLASLA 745

Query: 8   KE 3
           KE
Sbjct: 746 KE 747


>emb|CAN59846.1| hypothetical protein VITISV_004513 [Vitis vinifera]
          Length = 901

 Score =  162 bits (409), Expect = 3e-38
 Identities = 86/122 (70%), Positives = 97/122 (79%)
 Frame = -3

Query: 368 RDDLERANQILSSIPRDQLNSVAHFLESRGMIEDALDVATDSDYRFELAIQLGKLEIAQE 189
           R DLERAN++L SIP++  NSVA FLESRGMIEDAL+VATD DYRFELA+QLG+LE+A++
Sbjct: 594 RGDLERANELLPSIPKEHHNSVARFLESRGMIEDALEVATDPDYRFELAMQLGRLEVAKD 653

Query: 188 IAGVAQSESKWKQLGALAMSTGMLEMAEECLKHAKDXXXXXXXXXXXGDAEEILKLASLA 9
           IA   QSESKWKQLG LAMSTG LEMAEECLKHA D           GDA+ I KLASLA
Sbjct: 654 IATEVQSESKWKQLGELAMSTGKLEMAEECLKHAMDLSGLLLLYSSLGDADGISKLASLA 713

Query: 8   KE 3
           KE
Sbjct: 714 KE 715


>ref|NP_175645.1| coatomer subunit beta'-2 [Arabidopsis thaliana]
           gi|75169434|sp|Q9C827.1|COB22_ARATH RecName:
           Full=Coatomer subunit beta'-2; AltName: Full=Beta'-coat
           protein 2; Short=Beta'-COP 2
           gi|12323125|gb|AAG51545.1|AC037424_10 coatomer complex
           subunit, putative; 33791-27676 [Arabidopsis thaliana]
           gi|332194671|gb|AEE32792.1| coatomer subunit beta'-2
           [Arabidopsis thaliana]
          Length = 926

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/122 (68%), Positives = 99/122 (81%)
 Frame = -3

Query: 368 RDDLERANQILSSIPRDQLNSVAHFLESRGMIEDALDVATDSDYRFELAIQLGKLEIAQE 189
           R DL++A++IL +IP+DQ NSVAHFLESRGMIEDAL++ATD DYRFELAIQLG+LEIAQE
Sbjct: 601 RGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQE 660

Query: 188 IAGVAQSESKWKQLGALAMSTGMLEMAEECLKHAKDXXXXXXXXXXXGDAEEILKLASLA 9
           IA   QSESKWKQLG LAMS+G L+MAEEC+K+A D           GDAE + KLA+LA
Sbjct: 661 IAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLA 720

Query: 8   KE 3
           KE
Sbjct: 721 KE 722


>ref|NP_001185203.1| coatomer subunit beta'-2 [Arabidopsis thaliana]
            gi|332194672|gb|AEE32793.1| coatomer subunit beta'-2
            [Arabidopsis thaliana]
          Length = 970

 Score =  161 bits (408), Expect = 4e-38
 Identities = 84/122 (68%), Positives = 99/122 (81%)
 Frame = -3

Query: 368  RDDLERANQILSSIPRDQLNSVAHFLESRGMIEDALDVATDSDYRFELAIQLGKLEIAQE 189
            R DL++A++IL +IP+DQ NSVAHFLESRGMIEDAL++ATD DYRFELAIQLG+LEIAQE
Sbjct: 645  RGDLDKASEILPTIPKDQHNSVAHFLESRGMIEDALEIATDPDYRFELAIQLGRLEIAQE 704

Query: 188  IAGVAQSESKWKQLGALAMSTGMLEMAEECLKHAKDXXXXXXXXXXXGDAEEILKLASLA 9
            IA   QSESKWKQLG LAMS+G L+MAEEC+K+A D           GDAE + KLA+LA
Sbjct: 705  IAVEVQSESKWKQLGELAMSSGKLQMAEECMKYAMDLSGLLLLYSSLGDAEGVTKLATLA 764

Query: 8    KE 3
            KE
Sbjct: 765  KE 766


Top