BLASTX nr result

ID: Cnidium21_contig00023189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023189
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 ...   135   3e-30
ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-...   130   1e-28
gb|ACU20198.1| unknown [Glycine max]                                  130   1e-28
ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus...   126   2e-27
ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp....   125   3e-27

>ref|XP_002264766.1| PREDICTED: COBW domain-containing protein 2 [Vitis vinifera]
           gi|296088399|emb|CBI37390.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  135 bits (340), Expect = 3e-30
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +2

Query: 56  KGEDLYRMKGVLSVNGSSERYVFQGVHSTLDGCPGKTWEPEEKRINKIVFIGRHLDETAL 235
           KGEDLYRMKGVL VNGS ERYVFQGVHSTLDGCPGKTWEP+EKR++K+VFIGR+LDETAL
Sbjct: 347 KGEDLYRMKGVLCVNGSDERYVFQGVHSTLDGCPGKTWEPDEKRVSKLVFIGRNLDETAL 406

Query: 236 RKGFKGCLV 262
           RKGF+GCLV
Sbjct: 407 RKGFRGCLV 415


>ref|XP_003547836.1| PREDICTED: COBW domain-containing protein 2-like [Glycine max]
          Length = 424

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/69 (85%), Positives = 65/69 (94%)
 Frame = +2

Query: 56  KGEDLYRMKGVLSVNGSSERYVFQGVHSTLDGCPGKTWEPEEKRINKIVFIGRHLDETAL 235
           KG+DLYRMKGVLSV+ S +RYVFQGVHS LDGCPGKTWEP EKRINK+VFIGR+LDETAL
Sbjct: 356 KGDDLYRMKGVLSVDSSDQRYVFQGVHSMLDGCPGKTWEPNEKRINKLVFIGRNLDETAL 415

Query: 236 RKGFKGCLV 262
           +KGFKGCLV
Sbjct: 416 KKGFKGCLV 424


>gb|ACU20198.1| unknown [Glycine max]
          Length = 161

 Score =  130 bits (326), Expect = 1e-28
 Identities = 59/69 (85%), Positives = 65/69 (94%)
 Frame = +2

Query: 56  KGEDLYRMKGVLSVNGSSERYVFQGVHSTLDGCPGKTWEPEEKRINKIVFIGRHLDETAL 235
           KG+DLYRMKGVLSV+ S +RYVFQGVHS LDGCPGKTWEP EKRINK+VFIGR+LDETAL
Sbjct: 93  KGDDLYRMKGVLSVDSSDQRYVFQGVHSMLDGCPGKTWEPNEKRINKLVFIGRNLDETAL 152

Query: 236 RKGFKGCLV 262
           +KGFKGCLV
Sbjct: 153 KKGFKGCLV 161


>ref|XP_002519957.1| prli-interacting factor l, putative [Ricinus communis]
           gi|223541003|gb|EEF42561.1| prli-interacting factor l,
           putative [Ricinus communis]
          Length = 413

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = +2

Query: 56  KGEDLYRMKGVLSVNGSSERYVFQGVHSTLDGCPGKTWEPEEKRINKIVFIGRHLDETAL 235
           KGEDLYRMKGVLSV  S +RY+FQGVHSTLDGCPGK W P EKR+NK+VFIGR+LDETAL
Sbjct: 345 KGEDLYRMKGVLSVTDSDQRYIFQGVHSTLDGCPGKPWGPNEKRVNKLVFIGRNLDETAL 404

Query: 236 RKGFKGCL 259
           RKGFKGCL
Sbjct: 405 RKGFKGCL 412


>ref|XP_002870004.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315840|gb|EFH46263.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  125 bits (315), Expect = 3e-27
 Identities = 55/69 (79%), Positives = 64/69 (92%)
 Frame = +2

Query: 56  KGEDLYRMKGVLSVNGSSERYVFQGVHSTLDGCPGKTWEPEEKRINKIVFIGRHLDETAL 235
           KG+DLYRMKGVLS++ S +RY+FQGVHS LDGCPGK+W PEEKRINK+VFIGR+LDET L
Sbjct: 346 KGDDLYRMKGVLSIDSSDQRYIFQGVHSMLDGCPGKSWGPEEKRINKLVFIGRNLDETIL 405

Query: 236 RKGFKGCLV 262
           RKGFKGCL+
Sbjct: 406 RKGFKGCLI 414


Top