BLASTX nr result

ID: Cnidium21_contig00023169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023169
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262678.1| PREDICTED: uncharacterized protein LOC100244...   100   2e-19
ref|XP_002263259.1| PREDICTED: uncharacterized protein LOC100253...    87   1e-15
emb|CAN79912.1| hypothetical protein VITISV_027397 [Vitis vinifera]    78   9e-13
ref|XP_002521950.1| synovial sarcoma associated ss18 protein, pu...    77   1e-12
ref|XP_002332027.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10

>ref|XP_002262678.1| PREDICTED: uncharacterized protein LOC100244659 [Vitis vinifera]
           gi|297744112|emb|CBI37082.3| unnamed protein product
           [Vitis vinifera]
          Length = 224

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/132 (41%), Positives = 70/132 (53%), Gaps = 8/132 (6%)
 Frame = -2

Query: 427 DSQPPPSPMYAQ--------GGMNYMQQQQSQPMVPDPVIAARPSMFYGQQHPYXXXXXX 272
           D QP P  + AQ         G+NYMQ QQSQ M+P  ++AAR  M Y QQHPY      
Sbjct: 71  DCQPQPPSLQAQFSPNMVMQPGVNYMQHQQSQQMMPQSLMAARAPMLYAQQHPYLALQQQ 130

Query: 271 XXXXXXLGISTAGSSAGHSLQSDITLGSGGSAMFPNFNRSVSGEGWQAASRASGGSKKED 92
                 LG+S+ G    H LQS+  +G  G+  F +  RS++GEG  A SR  G + K+D
Sbjct: 131 QALQSQLGMSSTGMGGIHMLQSEPNVGGNGTGAFSDLGRSMTGEGLSAVSRGLGSASKQD 190

Query: 91  NGSTGSVEDHSG 56
            GS GS E   G
Sbjct: 191 VGSVGSAEGRRG 202


>ref|XP_002263259.1| PREDICTED: uncharacterized protein LOC100253609 [Vitis vinifera]
          Length = 223

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 57/139 (41%), Positives = 73/139 (52%), Gaps = 15/139 (10%)
 Frame = -2

Query: 427 DSQPPPSPMYAQ--------GGMNYMQQQQSQPMVPDPVIAARPSMFYGQQHPYXXXXXX 272
           DSQP P  M+AQ         G +YMQ QQ+Q M P  ++AAR SM Y QQ P+      
Sbjct: 70  DSQPQPPTMHAQFPPSGIVQPGAHYMQHQQAQQMTPQSLLAARSSMLYSQQ-PFSALQQQ 128

Query: 271 XXXXXXLGISTAGSSAGHSLQSDI-------TLGSGGSAMFPNFNRSVSGEGWQAASRAS 113
                 LG+ + GS+  H LQS+        TLG+GG   FP+F+R  SGEG QAA R  
Sbjct: 129 QAIHSQLGMGSGGSAGLHMLQSEGSNPGGNGTLGTGG---FPDFSRGTSGEGLQAAGRGM 185

Query: 112 GGSKKEDNGSTGSVEDHSG 56
            G  K+D G+      +SG
Sbjct: 186 AGGSKQDMGNAEGRGGNSG 204


>emb|CAN79912.1| hypothetical protein VITISV_027397 [Vitis vinifera]
          Length = 121

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/99 (40%), Positives = 53/99 (53%)
 Frame = -2

Query: 352 MVPDPVIAARPSMFYGQQHPYXXXXXXXXXXXXLGISTAGSSAGHSLQSDITLGSGGSAM 173
           M+P  ++AAR  M Y QQHPY            LG+S+ G    H LQS+  +G  G+  
Sbjct: 1   MMPQSLMAARAPMLYAQQHPYLALQQQQALQSQLGMSSTGMGGIHMLQSEPNVGGNGTGA 60

Query: 172 FPNFNRSVSGEGWQAASRASGGSKKEDNGSTGSVEDHSG 56
           F +  RS++GEG  A SR  G + K+D GS GS E   G
Sbjct: 61  FSDLGRSMTGEGLSAVSRGLGSASKQDVGSVGSAEGRRG 99


>ref|XP_002521950.1| synovial sarcoma associated ss18 protein, putative [Ricinus
           communis] gi|223538754|gb|EEF40354.1| synovial sarcoma
           associated ss18 protein, putative [Ricinus communis]
          Length = 219

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
 Frame = -2

Query: 427 DSQPPPSPMYAQ--------GGMNYMQQQQSQPMVPDPVIAARPSMFYGQQHPYXXXXXX 272
           DSQP P  M++Q         G +YMQ QQ+Q M P  V+AAR SM Y QQ  Y      
Sbjct: 70  DSQPQPPNMHSQFSSSGIMQPGAHYMQHQQAQQMTPQSVMAARSSMLYTQQQ-YAALQQQ 128

Query: 271 XXXXXXLGISTAGSSAGHSLQSDITLGSG----GSAMFPNFNRSVSGEGWQAASRASGGS 104
                 LG+S+ GS   H LQS+ +   G    G+  FP+F R  SG G         G 
Sbjct: 129 QALHSQLGMSSGGSPGLHMLQSEASTAGGSGGLGAGGFPDFGRDASGRG-------MAGG 181

Query: 103 KKEDNGSTGSVEDHSGKS 50
            K+D G+ GS E   G S
Sbjct: 182 SKQDMGNAGSGEGRGGNS 199


>ref|XP_002332027.1| predicted protein [Populus trichocarpa] gi|222875252|gb|EEF12383.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -2

Query: 427 DSQPPPSPMYAQ--------GGMNYMQQQQSQPMVPDPVIAARPSMFYGQQHPYXXXXXX 272
           D QP P  M+AQ         G +YMQ QQ+Q M P  ++AAR SM    Q P+      
Sbjct: 70  DCQPQPPTMHAQFPSSGIMQPGAHYMQHQQAQQMTPQALMAARSSMLQYAQQPFSALQQQ 129

Query: 271 XXXXXXLGISTAGSSAGHSLQSDITLGSG----GSAMFPNFNRSVSGEGWQAASRASGGS 104
                 LG+S+ GS+  H +QS+     G    G+  FP+F       G  A+SR     
Sbjct: 130 QALHSQLGMSSGGSAGLHMMQSEANTAGGSGALGAGRFPDF-------GMDASSRGIASG 182

Query: 103 KKEDNGSTGSVEDHSGKS 50
            K+D  S GS E   G S
Sbjct: 183 SKQDIRSAGSSEGRGGSS 200


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