BLASTX nr result
ID: Cnidium21_contig00023109
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00023109 (685 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me... 76 7e-12 gb|ABD64937.1| hypothetical protein 24.t00015 [Brassica oleracea] 70 3e-10 ref|XP_004147252.1| PREDICTED: uncharacterized protein LOC101210... 70 4e-10 ref|XP_003635128.1| PREDICTED: uncharacterized protein LOC100255... 70 4e-10 emb|CBI37351.3| unnamed protein product [Vitis vinifera] 70 4e-10 >ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula] Length = 1523 Score = 75.9 bits (185), Expect = 7e-12 Identities = 35/59 (59%), Positives = 43/59 (72%) Frame = +3 Query: 3 HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSL 179 HICYL+AEANFE Y SARLCL+GA H+KFPR Y S EAIQ+ F +P + + S S+ Sbjct: 871 HICYLIAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQIDFFIPEEVHILPESSSI 929 >gb|ABD64937.1| hypothetical protein 24.t00015 [Brassica oleracea] Length = 1327 Score = 70.5 bits (171), Expect = 3e-10 Identities = 37/70 (52%), Positives = 46/70 (65%) Frame = +3 Query: 3 HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182 HICYL+A+ NF+PY SARLCLVGA H+K+PR Y S EAIQ L T+ N + L Sbjct: 806 HICYLIADKNFDPYSDSARLCLVGADHWKYPRTYASPEAIQRTELYEYSKTLGNSQYIL- 864 Query: 183 LPTVPIQSIF 212 LP P + I+ Sbjct: 865 LPFQPYKIIY 874 >ref|XP_004147252.1| PREDICTED: uncharacterized protein LOC101210288 [Cucumis sativus] Length = 1403 Score = 70.1 bits (170), Expect = 4e-10 Identities = 39/70 (55%), Positives = 45/70 (64%) Frame = +3 Query: 3 HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182 HICYLVAEANFE Y SARLCL+GA H+KFPR Y S EAIQ L + N S + Sbjct: 852 HICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGN-SQFIL 910 Query: 183 LPTVPIQSIF 212 LP P + I+ Sbjct: 911 LPFQPYKLIY 920 >ref|XP_003635128.1| PREDICTED: uncharacterized protein LOC100255037 [Vitis vinifera] Length = 1425 Score = 70.1 bits (170), Expect = 4e-10 Identities = 40/70 (57%), Positives = 45/70 (64%) Frame = +3 Query: 3 HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182 HICYLVAEANFE Y SARLCLVGA H+KFPR Y S EAIQ L + N S + Sbjct: 886 HICYLVAEANFESYSDSARLCLVGADHWKFPRTYASPEAIQRTELYEYSKVLGN-SQFVL 944 Query: 183 LPTVPIQSIF 212 LP P + I+ Sbjct: 945 LPFQPYKLIY 954 >emb|CBI37351.3| unnamed protein product [Vitis vinifera] Length = 955 Score = 70.1 bits (170), Expect = 4e-10 Identities = 40/70 (57%), Positives = 45/70 (64%) Frame = +3 Query: 3 HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182 HICYLVAEANFE Y SARLCLVGA H+KFPR Y S EAIQ L + N S + Sbjct: 407 HICYLVAEANFESYSDSARLCLVGADHWKFPRTYASPEAIQRTELYEYSKVLGN-SQFVL 465 Query: 183 LPTVPIQSIF 212 LP P + I+ Sbjct: 466 LPFQPYKLIY 475