BLASTX nr result

ID: Cnidium21_contig00023109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023109
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...    76   7e-12
gb|ABD64937.1| hypothetical protein 24.t00015 [Brassica oleracea]      70   3e-10
ref|XP_004147252.1| PREDICTED: uncharacterized protein LOC101210...    70   4e-10
ref|XP_003635128.1| PREDICTED: uncharacterized protein LOC100255...    70   4e-10
emb|CBI37351.3| unnamed protein product [Vitis vinifera]               70   4e-10

>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1523

 Score = 75.9 bits (185), Expect = 7e-12
 Identities = 35/59 (59%), Positives = 43/59 (72%)
 Frame = +3

Query: 3    HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSL 179
            HICYL+AEANFE Y  SARLCL+GA H+KFPR Y S EAIQ+ F +P +  +   S S+
Sbjct: 871  HICYLIAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQIDFFIPEEVHILPESSSI 929


>gb|ABD64937.1| hypothetical protein 24.t00015 [Brassica oleracea]
          Length = 1327

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 37/70 (52%), Positives = 46/70 (65%)
 Frame = +3

Query: 3    HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182
            HICYL+A+ NF+PY  SARLCLVGA H+K+PR Y S EAIQ   L     T+ N  + L 
Sbjct: 806  HICYLIADKNFDPYSDSARLCLVGADHWKYPRTYASPEAIQRTELYEYSKTLGNSQYIL- 864

Query: 183  LPTVPIQSIF 212
            LP  P + I+
Sbjct: 865  LPFQPYKIIY 874


>ref|XP_004147252.1| PREDICTED: uncharacterized protein LOC101210288 [Cucumis sativus]
          Length = 1403

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 39/70 (55%), Positives = 45/70 (64%)
 Frame = +3

Query: 3    HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182
            HICYLVAEANFE Y  SARLCL+GA H+KFPR Y S EAIQ   L      + N S  + 
Sbjct: 852  HICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTELYEYSKVLGN-SQFIL 910

Query: 183  LPTVPIQSIF 212
            LP  P + I+
Sbjct: 911  LPFQPYKLIY 920


>ref|XP_003635128.1| PREDICTED: uncharacterized protein LOC100255037 [Vitis vinifera]
          Length = 1425

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +3

Query: 3    HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182
            HICYLVAEANFE Y  SARLCLVGA H+KFPR Y S EAIQ   L      + N S  + 
Sbjct: 886  HICYLVAEANFESYSDSARLCLVGADHWKFPRTYASPEAIQRTELYEYSKVLGN-SQFVL 944

Query: 183  LPTVPIQSIF 212
            LP  P + I+
Sbjct: 945  LPFQPYKLIY 954


>emb|CBI37351.3| unnamed protein product [Vitis vinifera]
          Length = 955

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 40/70 (57%), Positives = 45/70 (64%)
 Frame = +3

Query: 3   HICYLVAEANFEPYLYSARLCLVGAYHFKFPRIYVSQEAIQVPFLVPPQTTMQNISHSLD 182
           HICYLVAEANFE Y  SARLCLVGA H+KFPR Y S EAIQ   L      + N S  + 
Sbjct: 407 HICYLVAEANFESYSDSARLCLVGADHWKFPRTYASPEAIQRTELYEYSKVLGN-SQFVL 465

Query: 183 LPTVPIQSIF 212
           LP  P + I+
Sbjct: 466 LPFQPYKLIY 475


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