BLASTX nr result

ID: Cnidium21_contig00023088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023088
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW83473.1| RAV transcription factor [Capsicum annuum]             171   4e-41
gb|AAQ05799.1|AF478458_1 DNA binding protein Rav [Capsicum annuum]    171   4e-41
ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing ...   169   2e-40
gb|ACF74549.1| RAV [Nicotiana tabacum]                                169   2e-40
emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]   169   2e-40

>gb|AAW83473.1| RAV transcription factor [Capsicum annuum]
          Length = 399

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/102 (82%), Positives = 90/102 (88%), Gaps = 4/102 (3%)
 Frame = -3

Query: 313 GVVPQPNGRWGAQIYEKHQRVWLGTFNEEHEAAKAYDIAAQRFRGRDAVTNFKLL----S 146
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA+AYD+AAQRFRGRDAVTNFK L     
Sbjct: 76  GVVPQPNGRWGAQIYEKHQRVWLGTFNEENEAARAYDVAAQRFRGRDAVTNFKPLLENQE 135

Query: 145 QDDDVELMFLDTHSKAEIVDMLRKHTYSDELEQSKKTNGYKK 20
            DDDVE+ FL++HSKAEIVDMLRKHTY DELEQSKK  GY K
Sbjct: 136 SDDDVEIAFLNSHSKAEIVDMLRKHTYIDELEQSKKLFGYTK 177


>gb|AAQ05799.1|AF478458_1 DNA binding protein Rav [Capsicum annuum]
          Length = 386

 Score =  171 bits (434), Expect = 4e-41
 Identities = 84/102 (82%), Positives = 90/102 (88%), Gaps = 4/102 (3%)
 Frame = -3

Query: 313 GVVPQPNGRWGAQIYEKHQRVWLGTFNEEHEAAKAYDIAAQRFRGRDAVTNFKLL----S 146
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA+AYD+AAQRFRGRDAVTNFK L     
Sbjct: 63  GVVPQPNGRWGAQIYEKHQRVWLGTFNEENEAARAYDVAAQRFRGRDAVTNFKPLLENQE 122

Query: 145 QDDDVELMFLDTHSKAEIVDMLRKHTYSDELEQSKKTNGYKK 20
            DDDVE+ FL++HSKAEIVDMLRKHTY DELEQSKK  GY K
Sbjct: 123 SDDDVEIAFLNSHSKAEIVDMLRKHTYIDELEQSKKLFGYTK 164


>ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
           TEM1-like [Vitis vinifera]
          Length = 358

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/97 (84%), Positives = 89/97 (91%), Gaps = 2/97 (2%)
 Frame = -3

Query: 313 GVVPQPNGRWGAQIYEKHQRVWLGTFNEEHEAAKAYDIAAQRFRGRDAVTNFKLLS--QD 140
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAAKAYDIAAQRFRGRDAVTNFK LS  ++
Sbjct: 65  GVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETEE 124

Query: 139 DDVELMFLDTHSKAEIVDMLRKHTYSDELEQSKKTNG 29
           DD+E  FL++HSKAEIVDMLRKHTY+DELEQSK+  G
Sbjct: 125 DDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYG 161


>gb|ACF74549.1| RAV [Nicotiana tabacum]
          Length = 385

 Score =  169 bits (428), Expect = 2e-40
 Identities = 81/101 (80%), Positives = 91/101 (90%), Gaps = 3/101 (2%)
 Frame = -3

Query: 313 GVVPQPNGRWGAQIYEKHQRVWLGTFNEEHEAAKAYDIAAQRFRGRDAVTNFKLL---SQ 143
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAA+AYD+AAQRFRGRDAVTNFK L    +
Sbjct: 67  GVVPQPNGRWGAQIYEKHQRVWLGTFNEENEAARAYDVAAQRFRGRDAVTNFKPLLENEE 126

Query: 142 DDDVELMFLDTHSKAEIVDMLRKHTYSDELEQSKKTNGYKK 20
           +DD+E+ FL++HSKAEIVDMLRKHTY DELEQSKK  G+ K
Sbjct: 127 NDDMEIAFLNSHSKAEIVDMLRKHTYIDELEQSKKNYGFSK 167


>emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
          Length = 364

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/97 (84%), Positives = 89/97 (91%), Gaps = 2/97 (2%)
 Frame = -3

Query: 313 GVVPQPNGRWGAQIYEKHQRVWLGTFNEEHEAAKAYDIAAQRFRGRDAVTNFKLLS--QD 140
           GVVPQPNGRWGAQIYEKHQRVWLGTFNEE EAAKAYDIAAQRFRGRDAVTNFK LS  ++
Sbjct: 65  GVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAAKAYDIAAQRFRGRDAVTNFKPLSETEE 124

Query: 139 DDVELMFLDTHSKAEIVDMLRKHTYSDELEQSKKTNG 29
           DD+E  FL++HSKAEIVDMLRKHTY+DELEQSK+  G
Sbjct: 125 DDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYG 161


Top