BLASTX nr result
ID: Cnidium21_contig00023074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00023074
(1989 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 h... 702 0.0
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h... 682 0.0
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h... 681 0.0
emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera] 679 0.0
ref|XP_002298619.1| chromatin remodeling complex subunit [Populu... 662 0.0
>ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 546
Score = 702 bits (1811), Expect = 0.0
Identities = 353/538 (65%), Positives = 422/538 (78%), Gaps = 3/538 (0%)
Frame = +1
Query: 121 KNVGVPAAFGNSGAVPQTTPLNHQMQSHLMAQANPQAQGGAHFQGHFQLSDRXXXXXXXX 300
K+VG+ + +SG V QT PLNHQ HL++Q+ PQ GG HF GHFQLS+
Sbjct: 11 KSVGLGSV--SSGNVGQTMPLNHQ--PHLLSQSQPQTLGGTHFPGHFQLSEPQAQALAQT 66
Query: 301 XXXXXXXXVRGQAPHNQFQAQ--AQAQSYPQINSQGINNSNVSSPSIATPGTGSAKRPPQ 474
+ QA H QFQAQ AQAQS Q++S G +N VSSPS++TPGTGSAKR Q
Sbjct: 67 QYAQAHAQAQAQAAHAQFQAQLQAQAQSLAQLHSAGTSNLGVSSPSVSTPGTGSAKRGSQ 126
Query: 475 KQXXXXXXXXXXXXXXX-LKAMELTPAANRKKRKLPEKQIPDKVAALLPESALYTQLLEF 651
K K MELTPAA RKK KLPEKQIPDK+AAL+PESA+YTQL+E
Sbjct: 127 KPPSRPHGSANATNPASPFKTMELTPAARRKKPKLPEKQIPDKIAALVPESAIYTQLVEL 186
Query: 652 ESRVDAALSRKKLDIQESLKNRPHVQKTLRVYVFNTFANQRQRVPEKENAEPPSWSLKIM 831
E+RVDAAL+RKK DIQESLKN VQKTLR+YVFNTFANQ + PEK NAEPPSW+LKI+
Sbjct: 187 EARVDAALARKKTDIQESLKNPHRVQKTLRIYVFNTFANQTRMNPEKTNAEPPSWTLKII 246
Query: 832 GRVLEDEADPGAASTGQSSNVSYPKFSSFFKKITIYLDQSLYPDNHVIVWDSSRSPAPHE 1011
GR+LED DP A T + SYPKFSSFFKK+TIYLDQ LYPDNHVI+W+++RSP HE
Sbjct: 247 GRILEDGVDPVLAGTSDKLSSSYPKFSSFFKKMTIYLDQGLYPDNHVILWENARSPTLHE 306
Query: 1012 GFEVKRKGDKEFTAMIRLEMNYVPEKFKLSPVLSEVLGIEVETRPRIISAIWHYVKARKL 1191
GFEV+RKGDKEF A+IRLEMNYVPEKFKLS LSEVLG+EV+TRPRI++AIWHYVK+RKL
Sbjct: 307 GFEVQRKGDKEFNAIIRLEMNYVPEKFKLSTALSEVLGLEVDTRPRIVAAIWHYVKSRKL 366
Query: 1192 QISTDPSFFMCDAPLKKIFGEDKVKFGMIPLKISSHLTPPQPIHLEYKIKLSGNSSEGSS 1371
Q DPSFF+CD PL+K+FGE+K+KF M+P KIS HL+PPQPIHLE+K+KLSGNS G++
Sbjct: 367 QNPNDPSFFVCDPPLRKVFGEEKIKFAMVPQKISHHLSPPQPIHLEHKVKLSGNSPAGTT 426
Query: 1372 CYDLLVDVPYSLDKDMANFLANLDKHKEIDACDEAISSAIKKIHEHRLRRAFFLGFSQSP 1551
CYD+LVDVP L+K+M+ FLAN ++HKEIDA DE I ++IKKI EH RRAFFLGFS SP
Sbjct: 427 CYDVLVDVPLPLEKEMSAFLANTERHKEIDAYDETICASIKKIQEHNRRRAFFLGFSHSP 486
Query: 1552 ADFIDALIASQSKDLKLLSGDANHNAEKERRSEFYNQPWLEDAVIRYINRKPAAGNDA 1725
A+FI+ALI SQS+DLKL++GDA+ NAEKERR++FYNQPW++DAVIRY+NRKPA G +A
Sbjct: 487 AEFINALITSQSRDLKLVAGDASRNAEKERRADFYNQPWVDDAVIRYLNRKPAPGMEA 544
>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
complex component SNF12 homolog [Cucumis sativus]
Length = 547
Score = 682 bits (1761), Expect = 0.0
Identities = 345/533 (64%), Positives = 406/533 (76%), Gaps = 2/533 (0%)
Frame = +1
Query: 145 FGNSGAVPQTTPLNHQMQSHLMAQANPQAQGGAHFQGHFQLSDRXXXXXXXXXXXXXXXX 324
FGNSG VP + N S +Q PQAQ GA FQ F L+
Sbjct: 20 FGNSGMVPPSMAAN----STSFSQPQPQAQLGAGFQNPFPLTTAQVLAQAQYKAHAHAQ- 74
Query: 325 VRGQAPHNQFQAQAQAQSYPQINSQGINNSNVSSPS--IATPGTGSAKRPPQKQXXXXXX 498
+ QA H QFQAQ QAQ SQ + NV SPS +TPG KR PQK
Sbjct: 75 AQAQAAHAQFQAQLQAQGLSLTQSQNVGGGNVGSPSPGFSTPGLAGVKRIPQKPPVRPPI 134
Query: 499 XXXXXXXXXLKAMELTPAANRKKRKLPEKQIPDKVAALLPESALYTQLLEFESRVDAALS 678
LK MELTPAA +KK+KLPEKQ+ DKVAA+LPESALYTQLLEFESRVDAAL+
Sbjct: 135 LSPGTTFSPLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALA 194
Query: 679 RKKLDIQESLKNRPHVQKTLRVYVFNTFANQRQRVPEKENAEPPSWSLKIMGRVLEDEAD 858
RKK+DI E+LKN P +QKTLR+YVFNTFANQ +P+K NA+PP+W+LKI+GR+LED D
Sbjct: 195 RKKVDIHEALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWTLKIIGRILEDGID 254
Query: 859 PGAASTGQSSNVSYPKFSSFFKKITIYLDQSLYPDNHVIVWDSSRSPAPHEGFEVKRKGD 1038
P Q SN YPKFSSFFK++TI LDQ LYPD+H+IVW+++RSPAPHEGFEVKRKGD
Sbjct: 255 PDHPGVVQRSNPLYPKFSSFFKRVTISLDQRLYPDSHIIVWENARSPAPHEGFEVKRKGD 314
Query: 1039 KEFTAMIRLEMNYVPEKFKLSPVLSEVLGIEVETRPRIISAIWHYVKARKLQISTDPSFF 1218
KEF+ IRLEMNY+PEKFKLSP L EVLGIEV+TRPRII+AIWHYVKARKLQ DPSFF
Sbjct: 315 KEFSVNIRLEMNYIPEKFKLSPALMEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFF 374
Query: 1219 MCDAPLKKIFGEDKVKFGMIPLKISSHLTPPQPIHLEYKIKLSGNSSEGSSCYDLLVDVP 1398
CD PL+K+FGEDK+KF M+ +IS HL PPQPIHLE+K+KLSGNS G++CYD+LVDVP
Sbjct: 375 HCDPPLQKVFGEDKLKFTMVSQRISQHLFPPQPIHLEHKVKLSGNSPAGTACYDVLVDVP 434
Query: 1399 YSLDKDMANFLANLDKHKEIDACDEAISSAIKKIHEHRLRRAFFLGFSQSPADFIDALIA 1578
+ + ++++ LAN +K+KEIDACDEAI +AI+KIHEHR RRAFFLGFSQSP +FIDALI
Sbjct: 435 FPIHRELSALLANAEKNKEIDACDEAICTAIRKIHEHRRRRAFFLGFSQSPVEFIDALIE 494
Query: 1579 SQSKDLKLLSGDANHNAEKERRSEFYNQPWLEDAVIRYINRKPAAGNDAPGST 1737
SQSKDLKLL+G+A+ NAEKERRS+F+NQPW+EDAVIRYINRKPA G+DAPGST
Sbjct: 495 SQSKDLKLLAGEASRNAEKERRSDFFNQPWVEDAVIRYINRKPATGSDAPGST 547
>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
Length = 548
Score = 681 bits (1757), Expect = 0.0
Identities = 350/546 (64%), Positives = 414/546 (75%), Gaps = 7/546 (1%)
Frame = +1
Query: 121 KNVGVPAA-FGNSGAVPQTTPLNHQMQSHLMAQANPQAQG--GAHFQGHFQLSD--RXXX 285
KN+G ++ FGN+G P N + PQAQG G FQG FQLS +
Sbjct: 10 KNLGASSSPFGNAGMGSPAMPANPVF-------SQPQAQGQIGGGFQGQFQLSQAHQAHV 62
Query: 286 XXXXXXXXXXXXXVRGQAPHNQFQAQAQAQSYPQINSQGINNSNV--SSPSIATPGTGSA 459
+ QA H QFQAQ QAQ SQGI N+ SSPSI PG +
Sbjct: 63 IAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNSNM 122
Query: 460 KRPPQKQXXXXXXXXXXXXXXXLKAMELTPAANRKKRKLPEKQIPDKVAALLPESALYTQ 639
KR QK LK MELTPAA RKK+KLPEKQ+ D+VAA+LPESALYTQ
Sbjct: 123 KRTLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQ 182
Query: 640 LLEFESRVDAALSRKKLDIQESLKNRPHVQKTLRVYVFNTFANQRQRVPEKENAEPPSWS 819
LLEFESRVDAAL+RKK+DIQE+LKN P VQKTLR+Y+FNTFANQ + +P+K NAEPP+W+
Sbjct: 183 LLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPTWT 242
Query: 820 LKIMGRVLEDEADPGAASTGQSSNVSYPKFSSFFKKITIYLDQSLYPDNHVIVWDSSRSP 999
LKI+GR+LE+ DP A+ SNVSYPKFSSFFK++TI LDQ LYPDN +I+W+++RSP
Sbjct: 243 LKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSP 302
Query: 1000 APHEGFEVKRKGDKEFTAMIRLEMNYVPEKFKLSPVLSEVLGIEVETRPRIISAIWHYVK 1179
APHEGFEVKRKGDKEFT IRLEMNYVPEKFKLS L EVLGIEV+TRPRII+AIWHYVK
Sbjct: 303 APHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVK 362
Query: 1180 ARKLQISTDPSFFMCDAPLKKIFGEDKVKFGMIPLKISSHLTPPQPIHLEYKIKLSGNSS 1359
ARKLQ DPSFF CD PL+K+FGEDK+KF M+ KIS HL+PPQPIHLE+KIKLSGN
Sbjct: 363 ARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCP 422
Query: 1360 EGSSCYDLLVDVPYSLDKDMANFLANLDKHKEIDACDEAISSAIKKIHEHRLRRAFFLGF 1539
G++CYD+LVDVP+ + K+++ LAN +K+KEIDACDEAI SAI+KIHEHR RRAFFLGF
Sbjct: 423 AGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGF 482
Query: 1540 SQSPADFIDALIASQSKDLKLLSGDANHNAEKERRSEFYNQPWLEDAVIRYINRKPAAGN 1719
SQSP +FI+ LI SQSKDLKL++G+A+ NAEKERRS+F+NQPW+EDAVIRY+NRKP AG+
Sbjct: 483 SQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGS 542
Query: 1720 DAPGST 1737
DAPGST
Sbjct: 543 DAPGST 548
>emb|CAN60756.1| hypothetical protein VITISV_041986 [Vitis vinifera]
Length = 548
Score = 679 bits (1752), Expect = 0.0
Identities = 349/546 (63%), Positives = 413/546 (75%), Gaps = 7/546 (1%)
Frame = +1
Query: 121 KNVGVPAA-FGNSGAVPQTTPLNHQMQSHLMAQANPQAQG--GAHFQGHFQLSD--RXXX 285
KN+G ++ FGN+G P N + PQAQG G FQG FQLS +
Sbjct: 10 KNLGASSSPFGNAGMGSPAMPANPVF-------SQPQAQGQIGGGFQGQFQLSQAHQAHV 62
Query: 286 XXXXXXXXXXXXXVRGQAPHNQFQAQAQAQSYPQINSQGINNSNV--SSPSIATPGTGSA 459
+ QA H QFQAQ QAQ SQGI N+ SSPSI PG +
Sbjct: 63 IAQAHSKAQAHAQAQAQAAHAQFQAQLQAQGMTLNQSQGIGIGNMGGSSPSIGAPGNSNM 122
Query: 460 KRPPQKQXXXXXXXXXXXXXXXLKAMELTPAANRKKRKLPEKQIPDKVAALLPESALYTQ 639
KR QK LK MELTPAA RKK+KLPEKQ+ D+VAA+LPESALYTQ
Sbjct: 123 KRXLQKPPVRPPGPLGANTISPLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQ 182
Query: 640 LLEFESRVDAALSRKKLDIQESLKNRPHVQKTLRVYVFNTFANQRQRVPEKENAEPPSWS 819
LLEFESRVDAAL+RKK+DIQE+LKN P VQKTLR+Y+FNTF NQ + +P+K NAEPP+W+
Sbjct: 183 LLEFESRVDAALARKKIDIQEALKNPPCVQKTLRIYIFNTFXNQIRTIPKKPNAEPPTWT 242
Query: 820 LKIMGRVLEDEADPGAASTGQSSNVSYPKFSSFFKKITIYLDQSLYPDNHVIVWDSSRSP 999
LKI+GR+LE+ DP A+ SNVSYPKFSSFFK++TI LDQ LYPDN +I+W+++RSP
Sbjct: 243 LKIIGRILEEGVDPDQAAMLHKSNVSYPKFSSFFKRVTISLDQRLYPDNPIIIWENARSP 302
Query: 1000 APHEGFEVKRKGDKEFTAMIRLEMNYVPEKFKLSPVLSEVLGIEVETRPRIISAIWHYVK 1179
APHEGFEVKRKGDKEFT IRLEMNYVPEKFKLS L EVLGIEV+TRPRII+AIWHYVK
Sbjct: 303 APHEGFEVKRKGDKEFTVNIRLEMNYVPEKFKLSSALMEVLGIEVDTRPRIIAAIWHYVK 362
Query: 1180 ARKLQISTDPSFFMCDAPLKKIFGEDKVKFGMIPLKISSHLTPPQPIHLEYKIKLSGNSS 1359
ARKLQ DPSFF CD PL+K+FGEDK+KF M+ KIS HL+PPQPIHLE+KIKLSGN
Sbjct: 363 ARKLQNPNDPSFFNCDPPLQKVFGEDKMKFTMVSQKISQHLSPPQPIHLEHKIKLSGNCP 422
Query: 1360 EGSSCYDLLVDVPYSLDKDMANFLANLDKHKEIDACDEAISSAIKKIHEHRLRRAFFLGF 1539
G++CYD+LVDVP+ + K+++ LAN +K+KEIDACDEAI SAI+KIHEHR RRAFFLGF
Sbjct: 423 AGNACYDVLVDVPFPIQKELSALLANTEKNKEIDACDEAICSAIRKIHEHRRRRAFFLGF 482
Query: 1540 SQSPADFIDALIASQSKDLKLLSGDANHNAEKERRSEFYNQPWLEDAVIRYINRKPAAGN 1719
SQSP +FI+ LI SQSKDLKL++G+A+ NAEKERRS+F+NQPW+EDAVIRY+NRKP AG+
Sbjct: 483 SQSPVEFINTLIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPVAGS 542
Query: 1720 DAPGST 1737
DAPGST
Sbjct: 543 DAPGST 548
>ref|XP_002298619.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222845877|gb|EEE83424.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 555
Score = 662 bits (1707), Expect = 0.0
Identities = 340/539 (63%), Positives = 405/539 (75%), Gaps = 9/539 (1%)
Frame = +1
Query: 145 FGNSGAVPQTTPLNHQMQSHLMAQANPQAQGGAHFQG-HFQLSDRXXXXXXXXXXXXXXX 321
FGNSG V + N QAQ GA FQG FQLS
Sbjct: 23 FGNSGMVNPSMGANPTFPQ-------AQAQMGAGFQGGQFQLSQAQATLQAHLKAQQAHA 75
Query: 322 XVRG------QAPHNQFQAQAQAQ--SYPQINSQGINNSNVSSPSIATPGTGSAKRPPQK 477
+ QA H QFQAQ QAQ S Q S GI N SSPS +TPG SAKR PQK
Sbjct: 76 QAQAAHAAQVQAAHAQFQAQLQAQGVSLNQNQSAGIGNLGSSSPSFSTPGNASAKRLPQK 135
Query: 478 QXXXXXXXXXXXXXXXLKAMELTPAANRKKRKLPEKQIPDKVAALLPESALYTQLLEFES 657
LK M+L+ AA RKK+KLPEKQ+ D+VAA+LPESALYTQLLEFE+
Sbjct: 136 PLGRPPGVPMSSMVSPLKPMDLSSAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFET 195
Query: 658 RVDAALSRKKLDIQESLKNRPHVQKTLRVYVFNTFANQRQRVPEKENAEPPSWSLKIMGR 837
RVDAAL+RKK+DIQE+LK+ P VQKTLR+YVFNTFANQ + +P+K NA+PP+W+LK++GR
Sbjct: 196 RVDAALARKKVDIQEALKSPPCVQKTLRIYVFNTFANQIRTIPKKPNADPPTWTLKVIGR 255
Query: 838 VLEDEADPGAASTGQSSNVSYPKFSSFFKKITIYLDQSLYPDNHVIVWDSSRSPAPHEGF 1017
+LED DP Q SN YPKFSSFFK+++I LDQ LYPDNH+I+W+ +RSPAPHEGF
Sbjct: 256 ILEDGVDPDQPGAVQKSNPLYPKFSSFFKRVSIQLDQRLYPDNHIIIWEHARSPAPHEGF 315
Query: 1018 EVKRKGDKEFTAMIRLEMNYVPEKFKLSPVLSEVLGIEVETRPRIISAIWHYVKARKLQI 1197
EVKRKGDKEF+ IRLEMNYVPEKFKLSP L EVLGIEVETRPRII+AIWHYVKARKLQ
Sbjct: 316 EVKRKGDKEFSVNIRLEMNYVPEKFKLSPALMEVLGIEVETRPRIIAAIWHYVKARKLQN 375
Query: 1198 STDPSFFMCDAPLKKIFGEDKVKFGMIPLKISSHLTPPQPIHLEYKIKLSGNSSEGSSCY 1377
DPSFF CDAPL+K+FGE K+KF M+ +IS HL+PPQPIHLE+KIKLSGNS G+ CY
Sbjct: 376 PEDPSFFNCDAPLQKVFGESKMKFTMVSQRISQHLSPPQPIHLEHKIKLSGNSPAGTVCY 435
Query: 1378 DLLVDVPYSLDKDMANFLANLDKHKEIDACDEAISSAIKKIHEHRLRRAFFLGFSQSPAD 1557
D++VDVP+ + ++++ LAN +K+KEID CDEAI +AI+KIHEHR RRAFFLGFSQSP +
Sbjct: 436 DVVVDVPFPIQRELSALLANAEKNKEIDTCDEAICTAIRKIHEHRRRRAFFLGFSQSPVE 495
Query: 1558 FIDALIASQSKDLKLLSGDANHNAEKERRSEFYNQPWLEDAVIRYINRKPAAGNDAPGS 1734
F++ALI SQSKDLKL++G+A+ NAEKERRS+F+NQPW+EDAVIRY+NRKPAAG+DAP S
Sbjct: 496 FVNALIESQSKDLKLVAGEASRNAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPRS 554