BLASTX nr result

ID: Cnidium21_contig00023023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023023
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518649.1| PREDICTED: transcription initiation factor T...   173   1e-41
ref|XP_002264290.1| PREDICTED: transcription initiation factor T...   172   2e-41
ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_004168580.1| PREDICTED: transcription initiation factor T...   170   1e-40
ref|XP_004144526.1| PREDICTED: transcription initiation factor T...   170   1e-40

>ref|XP_003518649.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Glycine max]
          Length = 544

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/104 (82%), Positives = 94/104 (90%)
 Frame = -3

Query: 312 KAEHKENELPVDIKLPVKHVLSRELQLYFNKITELTLSRSDVVLFKEALVSLATDSGLHP 133
           K E K++ LPVDIKLPVKHVLSRELQLYF+K+ ELTLS SD VLFKEALVSLATDSGLHP
Sbjct: 151 KHEQKDDNLPVDIKLPVKHVLSRELQLYFDKVAELTLSESDSVLFKEALVSLATDSGLHP 210

Query: 132 LVPYFTCFIADEVARGLTEFNVLFALMRVVWSLLQNPHIRVEPY 1
           LVPYFTCFIADEV+RGL  F +LFALMRVV SLLQNPHI++EPY
Sbjct: 211 LVPYFTCFIADEVSRGLNNFPLLFALMRVVSSLLQNPHIQIEPY 254


>ref|XP_002264290.1| PREDICTED: transcription initiation factor TFIID subunit 6 [Vitis
           vinifera] gi|297739126|emb|CBI28777.3| unnamed protein
           product [Vitis vinifera]
          Length = 543

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/104 (79%), Positives = 95/104 (91%)
 Frame = -3

Query: 312 KAEHKENELPVDIKLPVKHVLSRELQLYFNKITELTLSRSDVVLFKEALVSLATDSGLHP 133
           K E K++ LPVDIKLP+KHVLSRELQLYF+KI +LT++RSD  LFKEALVSLATDSGLHP
Sbjct: 151 KFEQKDDGLPVDIKLPIKHVLSRELQLYFDKIIDLTVNRSDSALFKEALVSLATDSGLHP 210

Query: 132 LVPYFTCFIADEVARGLTEFNVLFALMRVVWSLLQNPHIRVEPY 1
           LVPYFT FI+DEV+RGL +FN+LFALMRVVWSLLQNPHI +EPY
Sbjct: 211 LVPYFTYFISDEVSRGLNDFNLLFALMRVVWSLLQNPHIHIEPY 254


>ref|XP_002320500.1| predicted protein [Populus trichocarpa] gi|222861273|gb|EEE98815.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/104 (79%), Positives = 94/104 (90%)
 Frame = -3

Query: 312 KAEHKENELPVDIKLPVKHVLSRELQLYFNKITELTLSRSDVVLFKEALVSLATDSGLHP 133
           K   + +E PVDIKLPVKHVLSRELQLYF+KIT+LT+ RSD VLFKEALVSLATDSGLHP
Sbjct: 150 KISEQNDEFPVDIKLPVKHVLSRELQLYFDKITDLTVRRSDSVLFKEALVSLATDSGLHP 209

Query: 132 LVPYFTCFIADEVARGLTEFNVLFALMRVVWSLLQNPHIRVEPY 1
           L+PYFT FIADEVARGL ++++LFALMRVVWSLLQNPHI +EPY
Sbjct: 210 LIPYFTYFIADEVARGLNDYSLLFALMRVVWSLLQNPHIHIEPY 253


>ref|XP_004168580.1| PREDICTED: transcription initiation factor TFIID subunit 6-like,
           partial [Cucumis sativus]
          Length = 439

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/104 (76%), Positives = 96/104 (92%)
 Frame = -3

Query: 312 KAEHKENELPVDIKLPVKHVLSRELQLYFNKITELTLSRSDVVLFKEALVSLATDSGLHP 133
           K+  +++E+PVDIKLPVKH+LS+ELQLYF+KITEL +SRS   LFK+ALVSLATDSGLHP
Sbjct: 45  KSSEQKDEVPVDIKLPVKHILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHP 104

Query: 132 LVPYFTCFIADEVARGLTEFNVLFALMRVVWSLLQNPHIRVEPY 1
           LVPYFTC+IADEVARGL ++++LFALMRVVWSLLQNPHI +EPY
Sbjct: 105 LVPYFTCYIADEVARGLGDYSLLFALMRVVWSLLQNPHIHIEPY 148


>ref|XP_004144526.1| PREDICTED: transcription initiation factor TFIID subunit 6-like
           [Cucumis sativus]
          Length = 544

 Score =  170 bits (431), Expect = 1e-40
 Identities = 80/104 (76%), Positives = 96/104 (92%)
 Frame = -3

Query: 312 KAEHKENELPVDIKLPVKHVLSRELQLYFNKITELTLSRSDVVLFKEALVSLATDSGLHP 133
           K+  +++E+PVDIKLPVKH+LS+ELQLYF+KITEL +SRS   LFK+ALVSLATDSGLHP
Sbjct: 150 KSSEQKDEVPVDIKLPVKHILSKELQLYFDKITELVVSRSSTDLFKKALVSLATDSGLHP 209

Query: 132 LVPYFTCFIADEVARGLTEFNVLFALMRVVWSLLQNPHIRVEPY 1
           LVPYFTC+IADEVARGL ++++LFALMRVVWSLLQNPHI +EPY
Sbjct: 210 LVPYFTCYIADEVARGLGDYSLLFALMRVVWSLLQNPHIHIEPY 253


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