BLASTX nr result

ID: Cnidium21_contig00023002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00023002
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   118   4e-25
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   115   4e-24
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   115   4e-24
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   115   4e-24

>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/74 (81%), Positives = 67/74 (90%)
 Frame = +3

Query: 27  ATEKLVFDVKLEKFDAASKIKIIKEVRAFTDLGLKDAKDLVEKVPIVVKKGLTKDEAEAI 206
           A EK  FD+KLEKFDAA+KIK+IKEVR FTDLGLK+AKDLVEKVP+V+KKGLTK+EA  I
Sbjct: 100 AAEKTAFDIKLEKFDAAAKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGLTKEEAGPI 159

Query: 207 SEKLKALGATVVLE 248
            EKLKALGATVVLE
Sbjct: 160 IEKLKALGATVVLE 173


>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/80 (77%), Positives = 69/80 (86%)
 Frame = +3

Query: 9   ATEVKEATEKLVFDVKLEKFDAASKIKIIKEVRAFTDLGLKDAKDLVEKVPIVVKKGLTK 188
           A E KEA EK VFD+KLEKFDAA+KIKIIKEVR FTDLGLK+AKDLVEKVP+V+KKG+TK
Sbjct: 90  AAETKEA-EKTVFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTK 148

Query: 189 DEAEAISEKLKALGATVVLE 248
           D+   I EKLK LGAT VLE
Sbjct: 149 DQGNPIIEKLKELGATAVLE 168


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = +3

Query: 9   ATEVKEATEKLVFDVKLEKFDAASKIKIIKEVRAFTDLGLKDAKDLVEKVPIVVKKGLTK 188
           +TE K A EK  FDVKLEKF+ ASKIK+IKE+RAFTDLGLK+AK+LVEK P++VKKGLTK
Sbjct: 89  STETKTA-EKTAFDVKLEKFETASKIKVIKEIRAFTDLGLKEAKELVEKAPVIVKKGLTK 147

Query: 189 DEAEAISEKLKALGATVVLE 248
           +EAE I EKLKA+GA V LE
Sbjct: 148 EEAEKIMEKLKAVGAIVALE 167


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GPATEVKEATEKLVFDVKLEKFDAASKIKIIKEVRAFTDLGLKDAKDLVEKVPIVVKKGL 182
           G A    +A EK  FD+KLEKFDAA+KIKIIKEVR FTDLGLK+AKDLVEK P+V+KKG+
Sbjct: 84  GSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGV 143

Query: 183 TKDEAEAISEKLKALGATVVLE 248
           TK+E   I EKLK LGATVVLE
Sbjct: 144 TKEEGNPIVEKLKELGATVVLE 165


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = +3

Query: 3   GPATEVKEATEKLVFDVKLEKFDAASKIKIIKEVRAFTDLGLKDAKDLVEKVPIVVKKGL 182
           G A    +A EK  FD+KLEKFDAA+KIKIIKEVR FTDLGLK+AKDLVEK P+V+KKG+
Sbjct: 534 GSAPADAKAAEKTAFDIKLEKFDAAAKIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGV 593

Query: 183 TKDEAEAISEKLKALGATVVLE 248
           TK+E   I EKLK LGATVVLE
Sbjct: 594 TKEEGNPIVEKLKELGATVVLE 615


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