BLASTX nr result

ID: Cnidium21_contig00022970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022970
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266376.2| PREDICTED: probable F-box protein At4g22030 ...   311   2e-82
ref|XP_003635570.1| PREDICTED: probable F-box protein At4g22030-...   310   3e-82
emb|CAN76158.1| hypothetical protein VITISV_022365 [Vitis vinifera]   306   4e-81
ref|XP_003632953.1| PREDICTED: probable F-box protein At4g22030-...   306   5e-81
ref|XP_002263253.1| PREDICTED: probable F-box protein At4g22030 ...   305   8e-81

>ref|XP_002266376.2| PREDICTED: probable F-box protein At4g22030 [Vitis vinifera]
          Length = 430

 Score =  311 bits (796), Expect = 2e-82
 Identities = 159/289 (55%), Positives = 200/289 (69%), Gaps = 7/289 (2%)
 Frame = +2

Query: 110 PLIALKIASTLLYIGATGMVIIMNKIQPSQLAEEQRNATRLFRHIQKHVQTVIDIGSPTA 289
           PL+ALK++STL+Y+ ATGM+++MNKIQPSQL EEQRNA RLF+ +   VQ  +  G+PT+
Sbjct: 148 PLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQVQRTLSCGTPTS 207

Query: 290 LEVEDTMNRVLTLDKAYPLPLLGVMIDKFPSSVESAVWWPLRQRIDQGEESDIDYENRYG 469
           ++VE+ M +VL LDKAYPLPLLG M+DKFP +VE AVWWP  ++  + +    D     G
Sbjct: 208 IDVEEAMEKVLALDKAYPLPLLGAMLDKFPETVEPAVWWPQHRQRQERQSGRTD-----G 262

Query: 470 NGWNEELENEMREIVGILRRNDEADYLRLGGIALKLNKVLALCGPCLTILGAIGSGFVGI 649
           NGW+ ELE EMRE+VG+L+R D  DYLRLG IALK+NK+LA+ GP LT L A G+ FVG 
Sbjct: 263 NGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLAACGTAFVG- 321

Query: 650 GSFEDSSWXXXXXXXXXXXXXXXNTMEHGGQVGMVVELYRSNAGFFRXXXXXXXFNLKEK 829
                  W               NTMEHGGQVGMV E+YRSNAGFFR        NL E+
Sbjct: 322 --SSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLNER 379

Query: 830 DVRKRENGELFEMKIALQLGRSIAELRNIA-------DKGHDIKEFGSK 955
           DV +RENGELFEMK+ALQLGRS++ L+++A        KG  I+EF SK
Sbjct: 380 DVGRRENGELFEMKVALQLGRSLSGLKDLAASSYYSSKKGEAIEEFASK 428


>ref|XP_003635570.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 657

 Score =  310 bits (794), Expect = 3e-82
 Identities = 158/289 (54%), Positives = 199/289 (68%), Gaps = 7/289 (2%)
 Frame = +2

Query: 110  PLIALKIASTLLYIGATGMVIIMNKIQPSQLAEEQRNATRLFRHIQKHVQTVIDIGSPTA 289
            PL+ALK++STL+Y+ ATGM+++MNKIQPSQL EEQRNA RLF+ +   +Q  +  G+PT+
Sbjct: 375  PLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAVRLFKQLHGQIQITLSCGTPTS 434

Query: 290  LEVEDTMNRVLTLDKAYPLPLLGVMIDKFPSSVESAVWWPLRQRIDQGEESDIDYENRYG 469
             +VE+ M +VL LDKAYPLPLLG M+DKFP +VE AVWWP  ++  + +    D     G
Sbjct: 435  TDVEEAMEKVLALDKAYPLPLLGAMLDKFPETVEPAVWWPQHRQRQERQSGRTD-----G 489

Query: 470  NGWNEELENEMREIVGILRRNDEADYLRLGGIALKLNKVLALCGPCLTILGAIGSGFVGI 649
            NGW+ ELE EMRE+VG+L+R D  DYLRLG IALK+NK+LA+ GP LT L A G+ FVG 
Sbjct: 490  NGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNKILAISGPLLTGLAACGTAFVG- 548

Query: 650  GSFEDSSWXXXXXXXXXXXXXXXNTMEHGGQVGMVVELYRSNAGFFRXXXXXXXFNLKEK 829
                   W               NTMEHGGQVGMV E+YRSNAGFFR        NL E+
Sbjct: 549  --SSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLNER 606

Query: 830  DVRKRENGELFEMKIALQLGRSIAELRNIA-------DKGHDIKEFGSK 955
            DV +RENGELFEMK+ALQLGRS++ L+++A        KG  I+EF SK
Sbjct: 607  DVGRRENGELFEMKVALQLGRSLSRLKDLAASSYSSSKKGEAIEEFASK 655



 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 30/41 (73%), Positives = 38/41 (92%)
 Frame = +2

Query: 110 PLIALKIASTLLYIGATGMVIIMNKIQPSQLAEEQRNATRL 232
           PL+ALK++STL+Y+ ATGM+++MNKIQPSQL EEQRNA RL
Sbjct: 148 PLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARL 188


>emb|CAN76158.1| hypothetical protein VITISV_022365 [Vitis vinifera]
          Length = 432

 Score =  306 bits (785), Expect = 4e-81
 Identities = 162/291 (55%), Positives = 202/291 (69%), Gaps = 9/291 (3%)
 Frame = +2

Query: 110 PLIALKIASTLLYIGATGMVIIMNKIQPSQLAEEQRNATRLFRHIQKHVQTVIDIGSPTA 289
           PL+ALK++STL+Y+ ATGM+++MNKIQPSQL EEQRNA RLF+ +   +Q  +  G+PT+
Sbjct: 149 PLVALKJSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTS 208

Query: 290 LEVEDTMNRVLTLDKAYPLPLLGVMIDKFPSSVESAVWWP-LRQRID-QGEESDIDYENR 463
            +VE+ M +VL+LDKA+PLPLLG M+DKFP +VE AVWWP  RQR D Q   +D      
Sbjct: 209 TDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSGRTD------ 262

Query: 464 YGNGWNEELENEMREIVGILRRNDEADYLRLGGIALKLNKVLALCGPCLTILGAIGSGFV 643
            GNGW+ ELE EMRE+VG+L+R D  DYLRLG IALK+N++LA+ GP LT L A G+ FV
Sbjct: 263 -GNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFV 321

Query: 644 GIGSFEDSSWXXXXXXXXXXXXXXXNTMEHGGQVGMVVELYRSNAGFFRXXXXXXXFNLK 823
             GS     W               NTMEHGGQVGMV E+YRSNAGFFR        NL 
Sbjct: 322 --GSSTHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLN 379

Query: 824 EKDVRKRENGELFEMKIALQLGRSIAELRNIA-------DKGHDIKEFGSK 955
           E+DV +RENGELFEMK+ALQLGRS++ L+ +A        KG  I+EF SK
Sbjct: 380 ERDVGRRENGELFEMKVALQLGRSLSGLKGLAASSCSSSKKGEAIEEFASK 430


>ref|XP_003632953.1| PREDICTED: probable F-box protein At4g22030-like [Vitis vinifera]
          Length = 430

 Score =  306 bits (784), Expect = 5e-81
 Identities = 161/291 (55%), Positives = 201/291 (69%), Gaps = 9/291 (3%)
 Frame = +2

Query: 110 PLIALKIASTLLYIGATGMVIIMNKIQPSQLAEEQRNATRLFRHIQKHVQTVIDIGSPTA 289
           PL+ALK++STL+Y+ ATGM+++MNKIQPSQL EEQRNA RLF+ +   +Q  +  G+PT+
Sbjct: 148 PLVALKLSSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTS 207

Query: 290 LEVEDTMNRVLTLDKAYPLPLLGVMIDKFPSSVESAVWWP-LRQRID-QGEESDIDYENR 463
            +VE+ M +VL+LDKA+PLPLLG M+DKFP +VE AVWWP  RQR D Q   +D      
Sbjct: 208 TDVEEAMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSRRTD------ 261

Query: 464 YGNGWNEELENEMREIVGILRRNDEADYLRLGGIALKLNKVLALCGPCLTILGAIGSGFV 643
            GNGW+ ELE EMRE+VG+L+R D  DYLRLG IALK+N++LA+ GP LT L A G+ FV
Sbjct: 262 -GNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRILAISGPLLTGLAACGTAFV 320

Query: 644 GIGSFEDSSWXXXXXXXXXXXXXXXNTMEHGGQVGMVVELYRSNAGFFRXXXXXXXFNLK 823
           G        W               NTMEHGGQVGMV E+YRSNAGFFR        NL 
Sbjct: 321 G---SSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLN 377

Query: 824 EKDVRKRENGELFEMKIALQLGRSIAELRNIA-------DKGHDIKEFGSK 955
           E+DV +RENGELFEMK+ALQLGRS++ L+ +A        KG  I+EF SK
Sbjct: 378 ERDVGRRENGELFEMKVALQLGRSLSGLKGLAASSCSSSKKGEAIEEFASK 428


>ref|XP_002263253.1| PREDICTED: probable F-box protein At4g22030 [Vitis vinifera]
          Length = 431

 Score =  305 bits (782), Expect = 8e-81
 Identities = 162/291 (55%), Positives = 201/291 (69%), Gaps = 9/291 (3%)
 Frame = +2

Query: 110 PLIALKIASTLLYIGATGMVIIMNKIQPSQLAEEQRNATRLFRHIQKHVQTVIDIGSPTA 289
           PL+ALKI+STL+Y+ ATGM+++MNKIQPSQL EEQRNA RLF+ +   +Q  +  G+PT+
Sbjct: 149 PLVALKISSTLMYLAATGMLVVMNKIQPSQLVEEQRNAARLFKQLHGQIQRTLSCGTPTS 208

Query: 290 LEVEDTMNRVLTLDKAYPLPLLGVMIDKFPSSVESAVWWP-LRQRID-QGEESDIDYENR 463
            +VE+ M +VL+LDKA+PLPLLG M+DKFP +VE AVWWP  RQR D Q   +D      
Sbjct: 209 TDVEEVMEKVLSLDKAFPLPLLGAMLDKFPKTVEPAVWWPEHRQRQDRQSGRTD------ 262

Query: 464 YGNGWNEELENEMREIVGILRRNDEADYLRLGGIALKLNKVLALCGPCLTILGAIGSGFV 643
            GNGW+ ELE EMRE+VG+L+R D  DYLRLG IALK+N++LA+ GP LT L A G+ FV
Sbjct: 263 -GNGWSVELEEEMREVVGVLKRKDTEDYLRLGKIALKVNRMLAISGPLLTGLAACGTAFV 321

Query: 644 GIGSFEDSSWXXXXXXXXXXXXXXXNTMEHGGQVGMVVELYRSNAGFFRXXXXXXXFNLK 823
           G        W               NTMEHGGQVGMV E+YRSNAGFFR        NL 
Sbjct: 322 G---SSHGPWAATLGVVAGAMASVVNTMEHGGQVGMVFEMYRSNAGFFRLMEESIESNLN 378

Query: 824 EKDVRKRENGELFEMKIALQLGRSIAELRNIA-------DKGHDIKEFGSK 955
           E+DV +RENGELFEMK+ALQLGRS++ L+ +A        KG  I+EF SK
Sbjct: 379 ERDVGRRENGELFEMKVALQLGRSLSGLKGLAASSCSSSKKGEAIEEFASK 429


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