BLASTX nr result

ID: Cnidium21_contig00022937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022937
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...    90   2e-16
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    86   6e-15

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   CLAVYDDSLTFLSLHETLKNFDIWTWTEGCWTRKFTLGPLPDIWTPVGHWK-CNILLQSL 177
           CLA Y DSL  L +HE  K   +WT  E CW + F++GPLP+I  P+GHWK   ++L S 
Sbjct: 300 CLATYQDSLAILDVHE--KFLHMWTLNERCWVKNFSIGPLPEISYPIGHWKNSKLILVSD 357

Query: 178 DGRMVLFDPDTQVTKDLAFQINGLLCQGVFAYMESLVSI 294
            G ++L DP TQ    L      + C GVFAY ESLV +
Sbjct: 358 SGELILCDPSTQEISGLGL-TRWVRCVGVFAYKESLVLV 395


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 46/106 (43%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
 Frame = +1

Query: 4   LAVYDDSLTFLSLHETLKNFDIWTWTEGCWTRKFTLGPLPDIWTPVGHWKCN-ILLQSLD 180
           LAVY+DS+  L + E++ +  +WT  E CWT+KF +GPL  +  PVGHW+ N I+L S  
Sbjct: 302 LAVYNDSIALLVVQESVLH--VWTLDERCWTKKFVVGPLLGVQYPVGHWQNNTIILISDS 359

Query: 181 GRMVLFDPDTQVTKDLAFQINGLLCQGVFAYMESLVSIK*KNETGQ 318
             ++L DP TQ    L F+   + C+G+FAY ESLV +K  +E  +
Sbjct: 360 YELLLCDPRTQEMSGLGFEGGTIRCEGIFAYKESLVPVKNGHEEAE 405


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 43/99 (43%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = +1

Query: 4   LAVYDDSLTFLSLHETLKNFDIWTWTEGCWTRKFTLGPLPDIWTPVGHWK-CNILLQSLD 180
           L +Y DS+ F ++H   K  DIW   EGCW R+F   PL ++  PV HWK  N++L S +
Sbjct: 254 LILYHDSIAFSTVHNVEKFLDIWVLNEGCWIRQFKSRPLLELRNPVAHWKNGNVILDSDN 313

Query: 181 GRMVLFDPDTQVTKDLAFQINGLLCQGVFAYMESLVSIK 297
            +++L+D + Q  KDL F+  G +C  +  Y ESLVSIK
Sbjct: 314 DQLMLYDTNKQELKDLRFKGTG-VCYEILVYRESLVSIK 351


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