BLASTX nr result

ID: Cnidium21_contig00022933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022933
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...   125   2e-26
emb|CBI30569.3| unnamed protein product [Vitis vinifera]              117   5e-24
ref|XP_002527728.1| zinc finger protein, putative [Ricinus commu...   112   2e-22
ref|XP_002308153.1| f-box family protein [Populus trichocarpa] g...   101   3e-19
ref|XP_002281144.1| PREDICTED: dof zinc finger protein DOF3.6-li...    94   6e-17

>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score =  125 bits (314), Expect = 2e-26
 Identities = 102/267 (38%), Positives = 122/267 (45%), Gaps = 3/267 (1%)
 Frame = +3

Query: 3   PRHFCKTCRRYWTRGGALRSVPVXXXXXXXXXXXXXXXXXXXXXEPANSGSSNSTLPSYS 182
           PRHFCKTCRRYWTRGGALR+VPV                     +      S+ST   +S
Sbjct: 95  PRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSSSKSPVSGD--RQAGSSSTGAIHS 152

Query: 183 NXXXXXXXNILGGLTSQIPQLRFMPPLTHLMADYGPGREIGMNYGGISGTIVSTTSEMNF 362
           N         + GL  QIP +RFM PL HL ADYG G +IG+NY GI  T V  T +MNF
Sbjct: 153 NCSTAE----ILGLAPQIPPMRFMAPLHHL-ADYGAG-DIGLNYSGIP-TAVGGTGDMNF 205

Query: 363 QIGSNLIRGSRDXXXXXXXXXXXXXXYLEQWRMHQTPQFIPNFLGGFDPS---ILSQGGV 533
           QIGS+L  GS                 LEQWR+ QT QF   FLGG DP       +GGV
Sbjct: 206 QIGSHLGGGSSGGAGGVGGSFLSVGG-LEQWRLQQTQQF--PFLGGLDPPPGLYPLEGGV 262

Query: 534 LYHSNNQDGGVETXXXXXXXXXXXXXXXVKVEAKXXXXXXXXQDHQFNSARQFTRTIQEN 713
               +N  GG                  VK+E           +H+ N ARQF   I  N
Sbjct: 263 --EPSNYVGGSSQVRPKLTGSGLSQVASVKME----------DNHEMNVARQFL-GIPGN 309

Query: 714 EHQWSXXXXXXXXXXXGFSTCSTSNPI 794
           +  W             FS+ STS+P+
Sbjct: 310 DQYWG---GNAWTDLASFSSSSTSHPL 333


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  117 bits (292), Expect = 5e-24
 Identities = 97/264 (36%), Positives = 113/264 (42%), Gaps = 3/264 (1%)
 Frame = +3

Query: 3   PRHFCKTCRRYWTRGGALRSVPVXXXXXXXXXXXXXXXXXXXXXEPANSGSSNSTLPSYS 182
           PRHFCKTCRRYWTRGGALR+VPV                     +      S+ST   +S
Sbjct: 95  PRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSSSKSPVSGD--RQAGSSSTGAIHS 152

Query: 183 NXXXXXXXNILGGLTSQIPQLRFMPPLTHLMADYGPGREIGMNYGGISGTIVSTTSEMNF 362
           N         + GL  QIP +RFM PL HL ADYG G +IG+NY GI  T V  T +MNF
Sbjct: 153 NCSTAE----ILGLAPQIPPMRFMAPLHHL-ADYGAG-DIGLNYSGIP-TAVGGTGDMNF 205

Query: 363 QIGSNLIRGSRDXXXXXXXXXXXXXXYLEQWRMHQTPQFIPNFLGGFDPS---ILSQGGV 533
           QIGS                       LEQWR+ QT QF   FLGG DP       +GGV
Sbjct: 206 QIGS-----------------------LEQWRLQQTQQF--PFLGGLDPPPGLYPLEGGV 240

Query: 534 LYHSNNQDGGVETXXXXXXXXXXXXXXXVKVEAKXXXXXXXXQDHQFNSARQFTRTIQEN 713
               +N  GG                  VK+E           +H+ N ARQF   I  N
Sbjct: 241 --EPSNYVGGSSQVRPKLTGSGLSQVASVKME----------DNHEMNVARQFL-GIPGN 287

Query: 714 EHQWSXXXXXXXXXXXGFSTCSTS 785
           +  W              ST  TS
Sbjct: 288 DQYWGGNAWTDLASFSSSSTTETS 311


>ref|XP_002527728.1| zinc finger protein, putative [Ricinus communis]
           gi|223532869|gb|EEF34641.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 338

 Score =  112 bits (279), Expect = 2e-22
 Identities = 93/265 (35%), Positives = 112/265 (42%), Gaps = 1/265 (0%)
 Frame = +3

Query: 3   PRHFCKTCRRYWTRGGALRSVPVXXXXXXXXXXXXXXXXXXXXXEPANSGSSNSTLPSYS 182
           PRHFCKTCRRYWTRGGALR+VPV                         + S  S+  S S
Sbjct: 94  PRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSSSSKSPVSSDRQTASGTSSTLSSS 153

Query: 183 NXXXXXXXNILGGLTSQIPQLRFMPPLTHLMADYGPGREIGMNYGGISGTIVSTTSEMNF 362
                   +IL GL  Q+P LRFM PL HL  +Y P  +IG+NYG +S   V  TS++NF
Sbjct: 154 G-----TSDIL-GLGPQVPPLRFMAPLHHL-NEYAP-CDIGLNYGALSAP-VGGTSDLNF 204

Query: 363 QIGSNLIRGSRDXXXXXXXXXXXXXXYLEQWRMHQTPQFIPNFLGGFDPSILSQGGVLYH 542
           QIGS L                     LEQWR+ Q  QF   FLGG DPS  S  G+   
Sbjct: 205 QIGSALASTGLGGGSGVAGGSLLSMGGLEQWRLQQGQQF--PFLGGLDPS--SSAGLYPF 260

Query: 543 SNNQDGGVETXXXXXXXXXXXXXXXVKVEAKXXXXXXXXQDHQFNSARQFTRTIQENEHQ 722
               +GG E                               +H+ N +RQF         Q
Sbjct: 261 ----EGGAEPSGYGGGIGGQVRPRTSTSLTTQFASVKMEDNHELNLSRQFLGINNPGSDQ 316

Query: 723 -WSXXXXXXXXXXXGFSTCSTSNPI 794
            WS            FS+ STSNP+
Sbjct: 317 YWS---STAWTDLSSFSSSSTSNPL 338


>ref|XP_002308153.1| f-box family protein [Populus trichocarpa]
           gi|222854129|gb|EEE91676.1| f-box family protein
           [Populus trichocarpa]
          Length = 326

 Score =  101 bits (251), Expect = 3e-19
 Identities = 66/170 (38%), Positives = 80/170 (47%)
 Frame = +3

Query: 3   PRHFCKTCRRYWTRGGALRSVPVXXXXXXXXXXXXXXXXXXXXXEPANSGSSNSTLPSYS 182
           PRHFCKTCRRYWTRGGALRSVPV                            S+ST+ S S
Sbjct: 97  PRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSKESSSKSPISGYRQTGSCSSSTVSSNS 156

Query: 183 NXXXXXXXNILGGLTSQIPQLRFMPPLTHLMADYGPGREIGMNYGGISGTIVSTTSEMNF 362
                       GL  Q+P +RFM PL H   ++  G  IG+NYG +S T+V   S++NF
Sbjct: 157 GTSDTF------GLGPQVPPMRFMAPLHH-HTEFASG-NIGLNYGALSKTLVGGASDLNF 208

Query: 363 QIGSNLIRGSRDXXXXXXXXXXXXXXYLEQWRMHQTPQFIPNFLGGFDPS 512
           Q+GS L                    + +QWRM Q  Q    FLGG D S
Sbjct: 209 QMGSALASAGLGGNGGAGGSLLSMGGF-DQWRMQQGQQL--PFLGGLDSS 255


>ref|XP_002281144.1| PREDICTED: dof zinc finger protein DOF3.6-like [Vitis vinifera]
          Length = 320

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 64/173 (36%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
 Frame = +3

Query: 3   PRHFCKTCRRYWTRGGALRSVPVXXXXXXXXXXXXXXXXXXXXXEPANSGSSNSTLPSYS 182
           PRHFCKTCRRYWTRGGALR+VPV                     E     +S S +PS  
Sbjct: 89  PRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKSKSSSSKSPASTERHAGSNSTSAIPSSG 148

Query: 183 NXXXXXXXNILGGLTSQIPQLRFMPPLTHLMADYGPGREIGMNYGGISGTIVSTT----S 350
                    I+G L  Q  QL FMP L +L   YG G  + +N+GG    +++++    +
Sbjct: 149 T------AEIIGHLPKQASQLPFMPTLQNL-TQYGIG-NMSLNFGGNLPHVMASSGGGQN 200

Query: 351 EMNFQIGSNLIRGSRDXXXXXXXXXXXXXXYLEQWRMHQTPQFIPNFLGGFDP 509
           EM F IGSN +  S +               +EQWR+ Q  QF   FLG F+P
Sbjct: 201 EMGFHIGSNSVGLSAEG--------------VEQWRLQQVQQF--PFLGSFEP 237


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