BLASTX nr result

ID: Cnidium21_contig00022913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022913
         (876 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding pro...   392   e-107
gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]   341   1e-91
gb|ABK24177.1| unknown [Picea sitchensis]                             338   7e-91
ref|XP_002279453.1| PREDICTED: zinc finger protein GIS2-like iso...   330   3e-88
ref|XP_003522851.1| PREDICTED: zinc finger protein GIS2-like [Gl...   327   3e-87

>ref|XP_002283925.1| PREDICTED: cellular nucleic acid-binding protein [Vitis vinifera]
           gi|296086261|emb|CBI31702.3| unnamed protein product
           [Vitis vinifera]
          Length = 238

 Score =  392 bits (1008), Expect = e-107
 Identities = 180/241 (74%), Positives = 190/241 (78%), Gaps = 4/241 (1%)
 Frame = +3

Query: 108 MSPDR-RSFPHAXXXXXXXXXXXXXAPYRRDQQ--RQDYLCNKCKRPGHFARDCPNVTVC 278
           M+ DR RS P A             APY RD +  RQDYLCNKCKRPGHFARDCPNVTVC
Sbjct: 1   MTLDRSRSPPQAKRLRSSDRASYQDAPYPRDHRVHRQDYLCNKCKRPGHFARDCPNVTVC 60

Query: 279 NNCGFPGHIAAECTSTTMCWNCKEPGHLASECPYDPVCHMCGKMGHLARDCFNPSLPAYD 458
           NNCG PGHIAAEC STTMCWNCKE GHLAS+CP DPVCHMCGKMGHLARDC +P LPA+D
Sbjct: 61  NNCGLPGHIAAECNSTTMCWNCKESGHLASQCPNDPVCHMCGKMGHLARDCSSPGLPAHD 120

Query: 459 SRLCNNCYKAGHIAVHCTNEKACNNCRKTGHLARDCSNEPVCNLCYISGHVARHCPKGSL 638
           +RLCNNCYK GHIA  CTNEKACNNC KTGHLARDC NEPVCN+C ISGHVAR CPK  L
Sbjct: 121 ARLCNNCYKPGHIAADCTNEKACNNCHKTGHLARDCLNEPVCNICNISGHVARQCPKSRL 180

Query: 639 -PEPEMFGGPFRDIICHTCGHPGHISRDCVSIMICNNCGGMGHGDYECPSRRLFDRGPRR 815
            PE    GGPFRDI CH CG PGHISRDCVSI+ICNNCGG GH  +ECPS R+FD   RR
Sbjct: 181 VPET---GGPFRDITCHNCGQPGHISRDCVSIVICNNCGGRGHQSFECPSVRMFDHVVRR 237

Query: 816 Y 818
           Y
Sbjct: 238 Y 238


>gb|AAQ89709.1| putative zinc finger protein [Hyacinthus orientalis]
          Length = 244

 Score =  341 bits (875), Expect = 1e-91
 Identities = 145/218 (66%), Positives = 169/218 (77%), Gaps = 5/218 (2%)
 Frame = +3

Query: 183 PYRRDQQ-----RQDYLCNKCKRPGHFARDCPNVTVCNNCGFPGHIAAECTSTTMCWNCK 347
           PYRRD +     RQD +C  CKRPGHFARDC ++ VCNNCG PGHIAAECT+ T+CWNCK
Sbjct: 28  PYRRDPREHRGFRQDVICKNCKRPGHFARDCSHIAVCNNCGLPGHIAAECTAKTLCWNCK 87

Query: 348 EPGHLASECPYDPVCHMCGKMGHLARDCFNPSLPAYDSRLCNNCYKAGHIAVHCTNEKAC 527
           EPGH+A+EC  + VCH C K GHLARDC    L ++D+RLCNNC++ GHIA  CTN+K C
Sbjct: 88  EPGHMANECSNEAVCHNCNKTGHLARDCSASGLSSFDTRLCNNCHRPGHIAADCTNDKTC 147

Query: 528 NNCRKTGHLARDCSNEPVCNLCYISGHVARHCPKGSLPEPEMFGGPFRDIICHTCGHPGH 707
           NNCRK GHLAR+C+N+PVCN+C +SGHVAR CPK +LP  E+ GGPFRDIIC  C  PGH
Sbjct: 148 NNCRKPGHLARECTNDPVCNVCNVSGHVARQCPKSNLPS-EIHGGPFRDIICRVCNQPGH 206

Query: 708 ISRDCVSIMICNNCGGMGHGDYECPSRRLFDRGPRRYY 821
           ISRDCV I+ICN CGG GH  YECPS RL DRG  R +
Sbjct: 207 ISRDCVGIVICNTCGGRGHMAYECPSGRLLDRGMFRRF 244


>gb|ABK24177.1| unknown [Picea sitchensis]
          Length = 248

 Score =  338 bits (868), Expect = 7e-91
 Identities = 148/221 (66%), Positives = 165/221 (74%), Gaps = 9/221 (4%)
 Frame = +3

Query: 180 APYRRD--QQRQDYLCNKCKRPGHFARDCPNVTVCNNCGFPGHIAAECTSTTMCWNCKEP 353
           APYRRD  + R D  C  CKRPGHFARDCPNV+VCNNCG PGHIA ECT+ ++CWNC+EP
Sbjct: 27  APYRRDFRRSRSDDACKNCKRPGHFARDCPNVSVCNNCGLPGHIAVECTTKSLCWNCREP 86

Query: 354 GHLASECPYDPVCHMCGKMGHLARDCFNPSLPAYDSRLCNNCYKAGHIAVHCTNEKACNN 533
           GH+AS+C  DP+CH CGK GHL+RDC  P LP  D RLCNNCYK GHIA  CTNEKACNN
Sbjct: 87  GHVASQCSNDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKACNN 146

Query: 534 CRKTGHLARDCSNEPVCNLCYISGHVARHCPKGSLPEPEMFG-------GPFRDIICHTC 692
           CRKTGHLARDC+N PVCNLC ISGHVAR CPKG + +    G       G F DIIC TC
Sbjct: 147 CRKTGHLARDCTNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTC 206

Query: 693 GHPGHISRDCVSIMICNNCGGMGHGDYECPSRRLFDRGPRR 815
             PGH SR+C  I+IC+NCGG GH  YECPS R+  R  RR
Sbjct: 207 NEPGHTSRECTPILICHNCGGRGHVAYECPSGRVMLRDMRR 247


>ref|XP_002279453.1| PREDICTED: zinc finger protein GIS2-like isoform 1 [Vitis vinifera]
          Length = 254

 Score =  330 bits (845), Expect = 3e-88
 Identities = 143/220 (65%), Positives = 166/220 (75%), Gaps = 7/220 (3%)
 Frame = +3

Query: 180 APYRRDQQR---QDYLCNKCKRPGHFARDCPNVTVCNNCGFPGHIAAECTSTTMCWNCKE 350
           APYRR+ +R   Q  LCN CKRPGHFAR+CPNV +CNNC  PGHIA+ECT+ ++CWNC+E
Sbjct: 35  APYRRESRRGFSQGNLCNNCKRPGHFARECPNVAICNNCNLPGHIASECTTQSLCWNCRE 94

Query: 351 PGHLASECPYDPVCHMCGKMGHLARDCFNPSLPAYDSRLCNNCYKAGHIAVHCTNEKACN 530
           PGH+AS CP + +CH C K GH ARDC  P LP+ D RLCNNCYK GHIA  CTN+KAC 
Sbjct: 95  PGHMASNCPNEGICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTNDKACK 154

Query: 531 NCRKTGHLARDCSNEPVCNLCYISGHVARHCPKGSLPEPEMFGG---PFRDIICHTCGHP 701
           NCRKTGH+ARDC NEPVCNLC I+GHVAR CPK  +      GG    FRD+IC +C   
Sbjct: 155 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQV 214

Query: 702 GHISRDC-VSIMICNNCGGMGHGDYECPSRRLFDRGPRRY 818
           GH+SRDC VS++ICNNCGG GH  +ECPS R  DR PRRY
Sbjct: 215 GHMSRDCMVSLVICNNCGGRGHMAFECPSGRFMDRMPRRY 254


>ref|XP_003522851.1| PREDICTED: zinc finger protein GIS2-like [Glycine max]
          Length = 254

 Score =  327 bits (837), Expect = 3e-87
 Identities = 140/226 (61%), Positives = 167/226 (73%), Gaps = 13/226 (5%)
 Frame = +3

Query: 180 APYRRDQQR---QDYLCNKCKRPGHFARDCPNVTVCNNCGFPGHIAAECTSTTMCWNCKE 350
           APYRRD +R   +D LC  CKRPGH+AR+CPNV +C+NCG PGHIA+ECT+ ++CWNCKE
Sbjct: 29  APYRRDSRRGFSRDNLCKNCKRPGHYARECPNVAICHNCGLPGHIASECTTKSLCWNCKE 88

Query: 351 PGHLASECPYDPVCHMCGKMGHLARDCFNPSLPAYDSRLCNNCYKAGHIAVHCTNEKACN 530
           PGH+AS CP + +CH CGK GH AR+C  P +P  D RLCNNCYK GHIA  CTNEKACN
Sbjct: 89  PGHMASSCPNEGICHTCGKAGHRARECSAPPMPPGDLRLCNNCYKQGHIAAECTNEKACN 148

Query: 531 NCRKTGHLARDCSNEPVCNLCYISGHVARHCPKGSLPEPEM---------FGGPFRDIIC 683
           NCRKTGHLARDC N+P+CNLC +SGHVAR CPK ++               GG +RD++C
Sbjct: 149 NCRKTGHLARDCPNDPICNLCNVSGHVARQCPKANVLGDRSGGGGGARGGGGGGYRDVVC 208

Query: 684 HTCGHPGHISRDCVS-IMICNNCGGMGHGDYECPSRRLFDRGPRRY 818
             C   GH+SRDC+  +MIC+NCGG GH  YECPS R  DR PRRY
Sbjct: 209 RNCQQLGHMSRDCMGPLMICHNCGGRGHLAYECPSGRFMDRYPRRY 254


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