BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022902
         (1054 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001131741.1| SKP1-like protein 1A [Zea mays] gi|194692400...    47   4e-07
dbj|BAE72121.1| SKP1-like protein [Silene latifolia]                   43   3e-06
dbj|BAE72119.1| SKP1-like protein [Silene latifolia]                   43   5e-06

>ref|NP_001131741.1| SKP1-like protein 1A [Zea mays] gi|194692400|gb|ACF80284.1| unknown
            [Zea mays] gi|195620466|gb|ACG32063.1| SKP1-like protein
            1A [Zea mays] gi|413935146|gb|AFW69697.1| SKP1-like
            protein 1A [Zea mays]
          Length = 163

 Score = 46.6 bits (109), Expect(2) = 4e-07
 Identities = 26/71 (36%), Positives = 40/71 (56%)
 Frame = -1

Query: 1039 NDRIITLMTADGDSLEVTEAMALQLHMAEDAIENDSAGNPIYALPGITKNITNMVIKYCS 860
            N R+ITL ++D +  EV EA+A++       IE+D A N I  LP +   I + VI+YC+
Sbjct: 7    NKRMITLRSSDLEEFEVEEAVAMESQTLRHMIEDDCADNGI-PLPNVNSRILSKVIEYCN 65

Query: 859  NNNAEFVKEVD 827
            ++     K  D
Sbjct: 66   SHVHAAAKPAD 76



 Score = 34.7 bits (78), Expect(2) = 4e-07
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = -3

Query: 713 FDLIQVAHHFQITVLMDLACQTLASKITRTSVADIKEQFITNQNYDWSSGGK---HSKWA 543
           FDLI  A++  I  L+DL CQT+A  I   +  +I++ F    ++      +    ++WA
Sbjct: 102 FDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFSIKNDFTQEEEDEIRMENQWA 161

Query: 542 Y 540
           +
Sbjct: 162 F 162


>dbj|BAE72121.1| SKP1-like protein [Silene latifolia]
          Length = 173

 Score = 43.1 bits (100), Expect(2) = 3e-06
 Identities = 25/73 (34%), Positives = 41/73 (56%)
 Frame = -1

Query: 1051 EYNSNDRIITLMTADGDSLEVTEAMALQLHMAEDAIENDSAGNPIYALPGITKNITNMVI 872
            E   + + I L ++DG+  EV + +AL+    +  IE+D A N I  LP +T  I + VI
Sbjct: 3    ESTESTKKILLKSSDGEDFEVDQIVALESQTIKHMIEDDCADNAI-PLPNVTGKILSKVI 61

Query: 871  KYCSNNNAEFVKE 833
            +YC   + EF ++
Sbjct: 62   EYC-KKHVEFAEK 73



 Score = 35.0 bits (79), Expect(2) = 3e-06
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -3

Query: 713 FDLIQVAHHFQITVLMDLACQTLASKITRTSVADIKEQFITNQNY---DWSSGGKHSKWA 543
           FDLI  A++  I  L+DL CQT+A  I   +  +I++ F    ++   +     + ++WA
Sbjct: 112 FDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWA 171

Query: 542 Y 540
           +
Sbjct: 172 F 172


>dbj|BAE72119.1| SKP1-like protein [Silene latifolia]
          Length = 160

 Score = 43.1 bits (100), Expect(2) = 5e-06
 Identities = 25/73 (34%), Positives = 41/73 (56%)
 Frame = -1

Query: 1051 EYNSNDRIITLMTADGDSLEVTEAMALQLHMAEDAIENDSAGNPIYALPGITKNITNMVI 872
            E   + + I L ++DG+  EV + +AL+    +  IE+D A N I  LP +T  I + VI
Sbjct: 3    ESTESTKKILLKSSDGEDFEVDQIVALESQTIKHMIEDDCADNAI-PLPNVTGKILSKVI 61

Query: 871  KYCSNNNAEFVKE 833
            +YC   + EF ++
Sbjct: 62   EYC-KKHVEFAEK 73



 Score = 34.3 bits (77), Expect(2) = 5e-06
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 713 FDLIQVAHHFQITVLMDLACQTLASKITRTSVADIKEQF 597
           FDLI  A++  I  L+DL CQT+A  I   +  +I++ F
Sbjct: 112 FDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTF 150