BLASTX nr result

ID: Cnidium21_contig00022896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022896
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC85247.1| salt tolerance protein 5 [Beta vulgaris]              160   9e-38
ref|XP_002265766.1| PREDICTED: nuclear migration protein nudC [V...   152   4e-35
ref|XP_002304368.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_003588525.1| Nuclear migration protein nudC [Medicago tru...   144   9e-33
gb|AFK38966.1| unknown [Medicago truncatula]                          144   9e-33

>emb|CAC85247.1| salt tolerance protein 5 [Beta vulgaris]
          Length = 295

 Score =  160 bits (406), Expect = 9e-38
 Identities = 92/202 (45%), Positives = 116/202 (57%), Gaps = 21/202 (10%)
 Frame = +2

Query: 2   SDYEE------PTITVPSTKQFHGVLDSSNPLGFIESALEFAARESELFQXXXXXXXXXX 163
           SDYEE      P    PS K+F    D SNPLGF++S LEF ++ES+ F           
Sbjct: 5   SDYEEEEHQPQPEKKQPS-KKFSATFDPSNPLGFLQSTLEFVSKESDFFAKESSAKDVVS 63

Query: 164 IVRGLKEKVDAEEKAAREKVNGNGAVKDIAXXXXXXXXXXXXXXXXI------------- 304
           +V+ +KEK   E +  ++K+    A    A                +             
Sbjct: 64  LVQKVKEKYIEEVENKKKKLLDESAAAAAAAAAAAASSSSSDLEKKVDDNESAEETEKSK 123

Query: 305 --APNAGNGLDMENYSWVQSLQEVTINIPVPLGTKSRSILFEMKKNHLKVGLKGQPPIID 478
             APN+GNG D+ENYSW+QSLQEVT+N+PVP GTKSR I  ++KKNHLKVGLKGQPPIID
Sbjct: 124 YKAPNSGNGQDLENYSWIQSLQEVTVNVPVPPGTKSRFIDCQIKKNHLKVGLKGQPPIID 183

Query: 479 ADLFQSIKVDDSIWSLEDQKSI 544
            +LF+ +K DD  WSLEDQKSI
Sbjct: 184 GELFKPVKPDDCFWSLEDQKSI 205


>ref|XP_002265766.1| PREDICTED: nuclear migration protein nudC [Vitis vinifera]
           gi|302144032|emb|CBI23137.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  152 bits (383), Expect = 4e-35
 Identities = 84/196 (42%), Positives = 111/196 (56%), Gaps = 15/196 (7%)
 Frame = +2

Query: 2   SDYEEPTITVPSTKQFHGVLDSSNPLGFIESALEFAARESELFQXXXXXXXXXXIVRGLK 181
           S+Y+E     PST  F+G LD SNPL F+ S   F +RE++ F+          + RG++
Sbjct: 5   SEYQEEE-RPPSTSTFNGTLDHSNPLEFLRSVFLFVSRETDFFKREAAEKEVAMLARGIR 63

Query: 182 E---KVDAEEKAAREKVNGNGAVKDIAXXXXXXXXXXXXXXXXI------------APNA 316
           E   K  AEE+   +K      +K+                  +             PN 
Sbjct: 64  EEERKKKAEERDLEDKGKAEKRLKETKVEPEKKAEKAEKAKEKVEDAKAEEKEGTQVPNK 123

Query: 317 GNGLDMENYSWVQSLQEVTINIPVPLGTKSRSILFEMKKNHLKVGLKGQPPIIDADLFQS 496
           GNGLD+E YSW+Q+LQEVT+ +PVP GTKSR I+ ++KKNHLKVGLKG PPIID +L + 
Sbjct: 124 GNGLDLEKYSWMQTLQEVTVTVPVPPGTKSRFIVCDIKKNHLKVGLKGHPPIIDGELSKP 183

Query: 497 IKVDDSIWSLEDQKSI 544
           IK DD  WSLEDQKS+
Sbjct: 184 IKPDDCFWSLEDQKSV 199


>ref|XP_002304368.1| predicted protein [Populus trichocarpa] gi|222841800|gb|EEE79347.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  145 bits (366), Expect = 4e-33
 Identities = 80/188 (42%), Positives = 117/188 (62%), Gaps = 7/188 (3%)
 Frame = +2

Query: 2   SDYEEP-----TITVPSTKQFHGVLDSSNPLGFIESALEFAARESELFQXXXXXXXXXXI 166
           SD+EEP     T T PS+  F+ VLD SNPLGF++SAL F +++S + +          +
Sbjct: 5   SDHEEPQQKQQTPTSPSSFSFNTVLDPSNPLGFLDSALNFLSQKSNVLKNDVSP-----L 59

Query: 167 VRGLKEKVDAEE--KAAREKVNGNGAVKDIAXXXXXXXXXXXXXXXXIAPNAGNGLDMEN 340
           V+  K+++ AEE  K A EK+      ++                    PN GNGLDME+
Sbjct: 60  VKEFKKRIRAEEDSKKAEEKIRAEKKKREEEKKRMR------------VPNKGNGLDMES 107

Query: 341 YSWVQSLQEVTINIPVPLGTKSRSILFEMKKNHLKVGLKGQPPIIDADLFQSIKVDDSIW 520
           +SW Q+LQEVTI + VP GTKS+ ++ E+K+  +KVGL+G  PI+D +LF++IK+DD IW
Sbjct: 108 HSWAQTLQEVTITVHVPPGTKSKDVVCEIKRKSVKVGLRGHSPILDGELFETIKIDDCIW 167

Query: 521 SLEDQKSI 544
           +LEDQK++
Sbjct: 168 NLEDQKTV 175


>ref|XP_003588525.1| Nuclear migration protein nudC [Medicago truncatula]
           gi|355477573|gb|AES58776.1| Nuclear migration protein
           nudC [Medicago truncatula]
          Length = 624

 Score =  144 bits (363), Expect = 9e-33
 Identities = 83/201 (41%), Positives = 111/201 (55%), Gaps = 20/201 (9%)
 Frame = +2

Query: 2   SDYEEPTITVPSTKQ-------FHGVLDSSNPLGFIESALEFAARES-ELFQXXXXXXXX 157
           SDY+E T T  S++        F    D SNP  F+E+  +F A+ES + F         
Sbjct: 334 SDYQEETQTSSSSQPKPSKPIPFSSTFDPSNPTAFLENVFDFIAKESTDFFDNDSAEKVV 393

Query: 158 XXIVRGLK-----------EKVDAEEKAAREKVNGNGAVKDIAXXXXXXXXXXXXXXXXI 304
              VR +K            K+ AEEKA  +K     A +  A                +
Sbjct: 394 LSAVRAVKVKKAKAVAAEKAKIAAEEKAKVDKAASVAAAEKKAKEVDEKEDDKKDGESGL 453

Query: 305 A-PNAGNGLDMENYSWVQSLQEVTINIPVPLGTKSRSILFEMKKNHLKVGLKGQPPIIDA 481
           A PN GNG+D+E YSW Q+LQE+ +N+PVP GTKSR +  E+KKNHLKVG+KGQPPIID 
Sbjct: 454 AAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSRFVTCEIKKNHLKVGIKGQPPIIDG 513

Query: 482 DLFQSIKVDDSIWSLEDQKSI 544
           +L++SIK DD  WS+EDQ ++
Sbjct: 514 ELYKSIKPDDCYWSIEDQNTL 534



 Score =  137 bits (346), Expect = 8e-31
 Identities = 79/196 (40%), Positives = 106/196 (54%), Gaps = 15/196 (7%)
 Frame = +2

Query: 2   SDYEEPTITVPSTKQ--------FHGVLDSSNPLGFIESALEFAARES-ELFQXXXXXXX 154
           SDY++ T T  S+ Q        F    D S P  F+E   +F A+ES + F        
Sbjct: 5   SDYQDETQTPSSSSQPKPSKTIPFSSTFDPSKPTAFLEKVFDFIAKESTDFFDKDSAEKM 64

Query: 155 XXXIVRGLKEK----VDAEEK--AAREKVNGNGAVKDIAXXXXXXXXXXXXXXXXIAPNA 316
               VR  K K    V AE+   A++EK      +K                    APN 
Sbjct: 65  VLSAVRAAKVKKAKAVAAEKAKIASQEKAKAAAGIKVNDEKSGVGTEKKDGESGLAAPNQ 124

Query: 317 GNGLDMENYSWVQSLQEVTINIPVPLGTKSRSILFEMKKNHLKVGLKGQPPIIDADLFQS 496
           GNG+D+E YSW Q+LQE+ +N+PVP GTKS  ++ E+KKNHLKVGLKGQPPIID +L++ 
Sbjct: 125 GNGMDLEKYSWTQTLQELNVNVPVPNGTKSGFVICEIKKNHLKVGLKGQPPIIDGELYKF 184

Query: 497 IKVDDSIWSLEDQKSI 544
           IK D+  WS+EDQ ++
Sbjct: 185 IKADECYWSIEDQSTV 200


>gb|AFK38966.1| unknown [Medicago truncatula]
          Length = 295

 Score =  144 bits (363), Expect = 9e-33
 Identities = 83/201 (41%), Positives = 111/201 (55%), Gaps = 20/201 (9%)
 Frame = +2

Query: 2   SDYEEPTITVPSTKQ-------FHGVLDSSNPLGFIESALEFAARES-ELFQXXXXXXXX 157
           SDY+E T T  S++        F    D SNP  F+E+  +F A+ES + F         
Sbjct: 5   SDYQEETQTSSSSQPKPSKPIPFSSTFDPSNPTAFLENVFDFIAKESTDFFDNDSAEKVV 64

Query: 158 XXIVRGLK-----------EKVDAEEKAAREKVNGNGAVKDIAXXXXXXXXXXXXXXXXI 304
              VR +K            K+ AEEKA  +K     A +  A                +
Sbjct: 65  LSAVRAVKVKKAKAVAAEKAKIAAEEKAKVDKAASVAAAEKKAKEVDEKEDDKKDGESGL 124

Query: 305 A-PNAGNGLDMENYSWVQSLQEVTINIPVPLGTKSRSILFEMKKNHLKVGLKGQPPIIDA 481
           A PN GNG+D+E YSW Q+LQE+ +N+PVP GTKSR +  E+KKNHLKVG+KGQPPIID 
Sbjct: 125 AAPNQGNGMDLEKYSWTQTLQELNVNVPVPNGTKSRFVTCEIKKNHLKVGIKGQPPIIDG 184

Query: 482 DLFQSIKVDDSIWSLEDQKSI 544
           +L++SIK DD  WS+EDQ ++
Sbjct: 185 ELYKSIKPDDCYWSIEDQNTL 205


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