BLASTX nr result

ID: Cnidium21_contig00022879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022879
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog ...   333   4e-89
ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Gl...   326   4e-87
ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog ...   318   1e-84
emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]   313   3e-83
ref|XP_003601737.1| Polyribonucleotide nucleotidyltransferase [M...   312   8e-83

>ref|XP_002264430.1| PREDICTED: 30S ribosomal protein S1 homolog [Vitis vinifera]
           gi|296089601|emb|CBI39420.3| unnamed protein product
           [Vitis vinifera]
          Length = 390

 Score =  333 bits (853), Expect = 4e-89
 Identities = 167/216 (77%), Positives = 189/216 (87%)
 Frame = -3

Query: 898 LILSEKEAVWVKYSRKVSVGDIFDARVGSIEDYGAFLHLRFPDGLYHLTGLVHVSEVSWD 719
           LI SEKEA W+K+S+++++GDIF+A VGS+EDYGAF+HLRFPDGLYHLTGLVHVSEVSWD
Sbjct: 175 LIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGLYHLTGLVHVSEVSWD 234

Query: 718 LVQDVRDILHEGDEVRAKVINIDSSKSRITLSIKQLEEDPLLETLDQVIPKXXXXXXXXX 539
           LVQDVRD+L+EGDEVR K++ +D  KSRITLSIKQLEEDPLLETLD+VIP+         
Sbjct: 235 LVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIPQDGSTGPDSL 294

Query: 538 XXXXXXDIEPLQGLETIVEELLQEDGISDVRITRQGFEKRVVSQDLQLWLSNAPSTGEQF 359
                 DIEPL GLETI EELLQE+GISDVRI+RQGFEKRVVSQDLQLWLSNAP+  +QF
Sbjct: 295 RTSDSYDIEPLPGLETIFEELLQEEGISDVRISRQGFEKRVVSQDLQLWLSNAPAVDKQF 354

Query: 358 TLLARAGRQVQEIQLTTVLDQEGIKRALQRVLERVP 251
           TLLARAGRQVQEIQLTT LDQEGIK+ALQRVLERVP
Sbjct: 355 TLLARAGRQVQEIQLTTSLDQEGIKKALQRVLERVP 390


>ref|XP_003553029.1| PREDICTED: 40S ribosomal protein S1-like [Glycine max]
          Length = 378

 Score =  326 bits (836), Expect = 4e-87
 Identities = 166/216 (76%), Positives = 183/216 (84%)
 Frame = -3

Query: 898 LILSEKEAVWVKYSRKVSVGDIFDARVGSIEDYGAFLHLRFPDGLYHLTGLVHVSEVSWD 719
           LI SEKEA W KYS++V+VGDIF+ RVG +EDYGAF+HLRFPDGLYHLTGL+HVSEVSWD
Sbjct: 163 LIFSEKEAAWSKYSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYHLTGLIHVSEVSWD 222

Query: 718 LVQDVRDILHEGDEVRAKVINIDSSKSRITLSIKQLEEDPLLETLDQVIPKXXXXXXXXX 539
           L+QDVRDIL  GDEVRAKV+ ID  KSRI LSI+QLEEDPLLETLD+VIP+         
Sbjct: 223 LIQDVRDILKVGDEVRAKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSM 282

Query: 538 XXXXXXDIEPLQGLETIVEELLQEDGISDVRITRQGFEKRVVSQDLQLWLSNAPSTGEQF 359
                  IEPL GLETI+EELLQEDGI DVRI+RQGFEKRVVSQDLQLWLSNAP T ++F
Sbjct: 283 SGGDSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLSNAPPTNQRF 342

Query: 358 TLLARAGRQVQEIQLTTVLDQEGIKRALQRVLERVP 251
           TLLARAGRQVQEI LTT LDQEGI+RALQRVLERVP
Sbjct: 343 TLLARAGRQVQEIHLTTSLDQEGIRRALQRVLERVP 378


>ref|XP_003537529.1| PREDICTED: 30S ribosomal protein S1 homolog [Glycine max]
          Length = 383

 Score =  318 bits (815), Expect = 1e-84
 Identities = 162/216 (75%), Positives = 180/216 (83%)
 Frame = -3

Query: 898 LILSEKEAVWVKYSRKVSVGDIFDARVGSIEDYGAFLHLRFPDGLYHLTGLVHVSEVSWD 719
           LI SEKEA W K+S++V+VGDIF+ RVG +EDYGAF+HLRFPDGLY LTGL+HVSEVSWD
Sbjct: 168 LIFSEKEAAWSKFSKQVNVGDIFEVRVGYVEDYGAFVHLRFPDGLYRLTGLIHVSEVSWD 227

Query: 718 LVQDVRDILHEGDEVRAKVINIDSSKSRITLSIKQLEEDPLLETLDQVIPKXXXXXXXXX 539
           L+QDVRDIL  GDEVR KV+ ID  KSRI LSI+QLEEDPLLETLD+VIP+         
Sbjct: 228 LIQDVRDILKVGDEVRVKVVGIDWGKSRINLSIRQLEEDPLLETLDKVIPQDGSADPDSM 287

Query: 538 XXXXXXDIEPLQGLETIVEELLQEDGISDVRITRQGFEKRVVSQDLQLWLSNAPSTGEQF 359
                  IEPL GLETI+EELLQEDGI DVRI+RQGFEKRVVSQDLQLWL NAP T ++F
Sbjct: 288 SGGDSGSIEPLPGLETILEELLQEDGIYDVRISRQGFEKRVVSQDLQLWLCNAPPTNQRF 347

Query: 358 TLLARAGRQVQEIQLTTVLDQEGIKRALQRVLERVP 251
           TLLARAGRQVQEI LTT LDQEGIK+ALQRVLERVP
Sbjct: 348 TLLARAGRQVQEIHLTTSLDQEGIKKALQRVLERVP 383


>emb|CAN68483.1| hypothetical protein VITISV_006784 [Vitis vinifera]
          Length = 418

 Score =  313 bits (803), Expect = 3e-83
 Identities = 167/244 (68%), Positives = 189/244 (77%), Gaps = 28/244 (11%)
 Frame = -3

Query: 898 LILSEKEAVWVKYSRKVSVGDIFDARVGSIEDYGAFLHLRFPDG----------LYHLTG 749
           LI SEKEA W+K+S+++++GDIF+A VGS+EDYGAF+HLRFPDG          LYHLTG
Sbjct: 175 LIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGAFVHLRFPDGTSFSVTYITGLYHLTG 234

Query: 748 LVHVSEVSWDLVQDVRDILHEGDEVRAKVINIDSSKSRITLSIKQLEEDPLLETLDQVIP 569
           LVHVSEVSWDLVQDVRD+L+EGDEVR K++ +D  KSRITLSIKQLEEDPLLETLD+VIP
Sbjct: 235 LVHVSEVSWDLVQDVRDVLNEGDEVRVKIVKVDRVKSRITLSIKQLEEDPLLETLDKVIP 294

Query: 568 ------------------KXXXXXXXXXXXXXXXDIEPLQGLETIVEELLQEDGISDVRI 443
                             +               DIEPL GLETI EELLQE+GISDVRI
Sbjct: 295 QIIFLLHRTKSSDVSHLLQDGSTGPDSLRTSDSYDIEPLPGLETIFEELLQEEGISDVRI 354

Query: 442 TRQGFEKRVVSQDLQLWLSNAPSTGEQFTLLARAGRQVQEIQLTTVLDQEGIKRALQRVL 263
           +RQGFEKRVVSQDLQLWLSNAP+  +QFTLLARAGRQVQEIQLTT LDQEGIK+ALQRVL
Sbjct: 355 SRQGFEKRVVSQDLQLWLSNAPAVDKQFTLLARAGRQVQEIQLTTSLDQEGIKKALQRVL 414

Query: 262 ERVP 251
           ERVP
Sbjct: 415 ERVP 418


>ref|XP_003601737.1| Polyribonucleotide nucleotidyltransferase [Medicago truncatula]
           gi|355490785|gb|AES71988.1| Polyribonucleotide
           nucleotidyltransferase [Medicago truncatula]
          Length = 399

 Score =  312 bits (799), Expect = 8e-83
 Identities = 154/216 (71%), Positives = 182/216 (84%)
 Frame = -3

Query: 898 LILSEKEAVWVKYSRKVSVGDIFDARVGSIEDYGAFLHLRFPDGLYHLTGLVHVSEVSWD 719
           L+LSEKEA W K+S+ +++GD+F+ RVGS+EDYGAF+HLRFPDGLYHLTGL+H+SEVSWD
Sbjct: 184 LVLSEKEASWFKHSKHINIGDLFEGRVGSVEDYGAFVHLRFPDGLYHLTGLIHISEVSWD 243

Query: 718 LVQDVRDILHEGDEVRAKVINIDSSKSRITLSIKQLEEDPLLETLDQVIPKXXXXXXXXX 539
           LVQDVRD L EG+EVR KVI+ID+ K R+TLSIKQLEEDPLLETLD+VI +         
Sbjct: 244 LVQDVRDFLREGEEVRVKVISIDTVKMRLTLSIKQLEEDPLLETLDKVIRQDGSGVPNSI 303

Query: 538 XXXXXXDIEPLQGLETIVEELLQEDGISDVRITRQGFEKRVVSQDLQLWLSNAPSTGEQF 359
                  I+PL GL+TI+EELLQEDGI++ RI+RQGFEKRVVSQDLQLWLSNAP   ++F
Sbjct: 304 SSTTSSPIDPLPGLDTILEELLQEDGINEARISRQGFEKRVVSQDLQLWLSNAPPMDQRF 363

Query: 358 TLLARAGRQVQEIQLTTVLDQEGIKRALQRVLERVP 251
           TLLARAGRQVQEI L T LDQEGIK+A+QRVLERVP
Sbjct: 364 TLLARAGRQVQEIHLKTSLDQEGIKKAIQRVLERVP 399


Top