BLASTX nr result
ID: Cnidium21_contig00022829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00022829
(1965 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum... 636 e-180
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca... 635 e-179
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca... 635 e-179
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK... 634 e-179
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi... 634 e-179
>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
Length = 519
Score = 636 bits (1640), Expect = e-180
Identities = 329/507 (64%), Positives = 377/507 (74%), Gaps = 19/507 (3%)
Frame = +1
Query: 145 EPNPKKLKMXXXXXXXXXXXXXXE----KKPRYKRRKIAILFAYCGVGYQGMQKNPGAKT 312
EP+PKKLKM KK RYKRRK+AI FAYCGVGYQGMQKNPGAKT
Sbjct: 20 EPDPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKT 79
Query: 313 IEGDLEEALYQAGAVPEHDRGVPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGFIERL 492
IE DLEEALY AGAVPE DRG+ KR+DWARSARTDKGVSAVGQVVSGRFYIDPPGF++RL
Sbjct: 80 IEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVDRL 139
Query: 493 QSNLPDQFKIFGYKRVTGSFNAKKFCDRRRYVYMLPVFALDPSAHRDRESVLASLGSGGE 672
SNL Q +IFGYKRVT SFNAKKFCDRRRYVY++PVFALDP+ HRDRESV ASLGS E
Sbjct: 140 NSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPNCHRDRESVKASLGSDNE 199
Query: 673 LVKCLECSERGRKVFGVMGKRNFDDEGEVNGVMSESGILSNSLSAV-------------- 810
LVKCLECSERGRKV G+MGKRNF EV ++ES I SN ++A+
Sbjct: 200 LVKCLECSERGRKVEGLMGKRNF----EVKTAITESDISSNIVNAIEVSDVQANGVLEDS 255
Query: 811 -SGLESGDVKMIVSTNAVGDIDLASVNGNEVLAEHVNELGNDQTTEMIEEKKIDIELNES 987
+ +S ++ N ++ +AS + + ++ LGND + +E E
Sbjct: 256 ATTSDSNKQTSVLVENTATELTVASEGIAKSESSEMSGLGNDSEIVVSKESVNGKEKPSG 315
Query: 988 GFCYGEEEKERFNRILKSYEGTHNYHNFTTRTKADDPSAHRYIISFKADTTVTVDGIEFI 1167
F YGEEEK RFNRILK Y GTHN+HNFTTRTKA+DP+A R+I+SF A TTV V+GIEF+
Sbjct: 316 SFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVSFDASTTVVVEGIEFV 375
Query: 1168 KCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIDIALQKDINITVPMAPEVGLYLDECF 1347
KCEVVGQSFMLHQIRKM+G+AVAIMRNCAPESLI+ ALQKD+NI VP APEVGLYLDEC
Sbjct: 376 KCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNINVPTAPEVGLYLDECL 435
Query: 1348 FTSYNQKWKDSHEEVSMKDYEAEAEDFKIKHIYSHIASSEHKDGAVGLWLHSLNYRNYPD 1527
FTSYNQKWKD+HEEVSMK YE AEDFK+K IYSHIAS+EHKDGAV LWLHSLN+RNYPD
Sbjct: 436 FTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSHIASTEHKDGAVALWLHSLNHRNYPD 495
Query: 1528 LLVATTDGKTTTDVKNVEVEIKTDGRS 1608
L V K KN V+++T +
Sbjct: 496 LRVIDEVAKI---AKNTSVDMETQAET 519
>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
[Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
[Medicago truncatula]
Length = 530
Score = 635 bits (1638), Expect = e-179
Identities = 332/530 (62%), Positives = 394/530 (74%), Gaps = 21/530 (3%)
Frame = +1
Query: 127 PAAAEVEPNPKKLKMXXXXXXXXXXXXXXEKKPRYKRRKIAILFAYCGVGYQGMQKNPGA 306
P+A EP KK+KM K RYKRRK+AI FAYCGVGYQGMQKNPGA
Sbjct: 17 PSAVAEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGA 76
Query: 307 KTIEGDLEEALYQAGAVPEHDRGVPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGFIE 486
KTIEG+LEEALY +GAVPE DRG+ KR+DWARSARTDKGVSAVGQVVSGRFYIDPPGF++
Sbjct: 77 KTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVD 136
Query: 487 RLQSNLPDQFKIFGYKRVTGSFNAKKFCDRRRYVYMLPVFALDPSAHRDRESVLASLGSG 666
RL SNLP Q +IFG+KRVT SF+AKKFCDRRRYVY++PVFALDP HRDRE+VLASLGS
Sbjct: 137 RLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSE 196
Query: 667 GELVKCLECSERGRKVFGVMG--KRNFDDEGEVNGVMSESGILSNSLSAVSGLESGDVKM 840
ELVKCL CSERGRKV GV+G KRN E+ V E+G SN V + DV++
Sbjct: 197 NELVKCLPCSERGRKVEGVVGNSKRNL----ELEAVDVENGS-SNKNDVVDSGVTKDVEV 251
Query: 841 IVSTNAVGDIDLASVNGNE--VLAEHVNEL--------------GNDQTTEMIEEKKI-- 966
+S ++ S+N NE V E VN G++ ++EE+K+
Sbjct: 252 SLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLGILEEEKVNR 311
Query: 967 -DIELNESGFCYGEEEKERFNRILKSYEGTHNYHNFTTRTKADDPSAHRYIISFKADTTV 1143
D N SGFCYGE+E+ERFN ILK Y GTHN+HNFTTR K +DPSA R+IISF A TTV
Sbjct: 312 EDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTV 371
Query: 1144 TVDGIEFIKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIDIALQKDINITVPMAPEV 1323
V+G+EF+KCE+VGQSFMLHQIRKM+G+AVAIMRNCAPESLI+ ALQKD++ITVP APEV
Sbjct: 372 VVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEV 431
Query: 1324 GLYLDECFFTSYNQKWKDSHEEVSMKDYEAEAEDFKIKHIYSHIASSEHKDGAVGLWLHS 1503
GLYLDECFFTSYNQKWKD+HEEVSMK YE EAEDFK+++IY HIAS+E+K+G VGLWLHS
Sbjct: 432 GLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHS 491
Query: 1504 LNYRNYPDLLVATTDGKTTTDVKNVEVEIKTDGRSAETDASTTEVKVTTD 1653
LN+RNYPDL + DG+ T+ K VEV++ + TE++V T+
Sbjct: 492 LNHRNYPDLRI--LDGEGVTNDKKVEVDM---------NDKKTEIEVVTE 530
>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
[Medicago truncatula]
Length = 530
Score = 635 bits (1638), Expect = e-179
Identities = 332/530 (62%), Positives = 394/530 (74%), Gaps = 21/530 (3%)
Frame = +1
Query: 127 PAAAEVEPNPKKLKMXXXXXXXXXXXXXXEKKPRYKRRKIAILFAYCGVGYQGMQKNPGA 306
P+A EP KK+KM K RYKRRK+AI FAYCGVGYQGMQKNPGA
Sbjct: 17 PSAVAEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGA 76
Query: 307 KTIEGDLEEALYQAGAVPEHDRGVPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGFIE 486
KTIEG+LEEALY +GAVPE DRG+ KR+DWARSARTDKGVSAVGQVVSGRFYIDPPGF++
Sbjct: 77 KTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVD 136
Query: 487 RLQSNLPDQFKIFGYKRVTGSFNAKKFCDRRRYVYMLPVFALDPSAHRDRESVLASLGSG 666
RL SNLP Q +IFG+KRVT SF+AKKFCDRRRYVY++PVFALDP HRDRE+VLASLGS
Sbjct: 137 RLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSE 196
Query: 667 GELVKCLECSERGRKVFGVMG--KRNFDDEGEVNGVMSESGILSNSLSAVSGLESGDVKM 840
ELVKCL CSERGRKV GV+G KRN E+ V E+G SN V + DV++
Sbjct: 197 NELVKCLPCSERGRKVEGVVGNSKRNL----ELEAVDVENGS-SNKNDVVDSGVTKDVEV 251
Query: 841 IVSTNAVGDIDLASVNGNE--VLAEHVNEL--------------GNDQTTEMIEEKKI-- 966
+S ++ S+N NE V E VN G++ ++EE+K+
Sbjct: 252 SLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDEDEVAPINGGSENNLGILEEEKVNR 311
Query: 967 -DIELNESGFCYGEEEKERFNRILKSYEGTHNYHNFTTRTKADDPSAHRYIISFKADTTV 1143
D N SGFCYGE+E+ERFN ILK Y GTHN+HNFTTR K +DPSA R+IISF A TTV
Sbjct: 312 EDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTV 371
Query: 1144 TVDGIEFIKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIDIALQKDINITVPMAPEV 1323
V+G+EF+KCE+VGQSFMLHQIRKM+G+AVAIMRNCAPESLI+ ALQKD++ITVP APEV
Sbjct: 372 VVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEV 431
Query: 1324 GLYLDECFFTSYNQKWKDSHEEVSMKDYEAEAEDFKIKHIYSHIASSEHKDGAVGLWLHS 1503
GLYLDECFFTSYNQKWKD+HEEVSMK YE EAEDFK+++IY HIAS+E+K+G VGLWLHS
Sbjct: 432 GLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHS 491
Query: 1504 LNYRNYPDLLVATTDGKTTTDVKNVEVEIKTDGRSAETDASTTEVKVTTD 1653
LN+RNYPDL + DG+ T+ K VEV++ + TE++V T+
Sbjct: 492 LNHRNYPDLRI--LDGEGVTNDKKVEVDM---------NDKKTEIEVVTE 530
>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
[Medicago truncatula]
Length = 530
Score = 634 bits (1636), Expect = e-179
Identities = 332/530 (62%), Positives = 393/530 (74%), Gaps = 21/530 (3%)
Frame = +1
Query: 127 PAAAEVEPNPKKLKMXXXXXXXXXXXXXXEKKPRYKRRKIAILFAYCGVGYQGMQKNPGA 306
P+A EP KK+KM K RYKRRK+AI FAYCGVGYQGMQKNPGA
Sbjct: 17 PSAVAEEPATKKVKMSTTTSDDEGCTTAEGSKVRYKRRKVAIFFAYCGVGYQGMQKNPGA 76
Query: 307 KTIEGDLEEALYQAGAVPEHDRGVPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGFIE 486
KTIEG+LEEALY +GAVPE DRG+ KR+DWARSARTDKGVSAVGQVVSGRFYIDPPGF++
Sbjct: 77 KTIEGELEEALYVSGAVPEQDRGLSKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGFVD 136
Query: 487 RLQSNLPDQFKIFGYKRVTGSFNAKKFCDRRRYVYMLPVFALDPSAHRDRESVLASLGSG 666
RL SNLP Q +IFG+KRVT SF+AKKFCDRRRYVY++PVFALDP HRDRE+VLASLGS
Sbjct: 137 RLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRYVYLIPVFALDPCCHRDRETVLASLGSE 196
Query: 667 GELVKCLECSERGRKVFGVMG--KRNFDDEGEVNGVMSESGILSNSLSAVSGLESGDVKM 840
ELVKCL CSERGRKV GV+G KRN E+ V E+G SN V + DV++
Sbjct: 197 NELVKCLPCSERGRKVEGVVGNSKRNL----ELEAVDVENGS-SNKNDVVDSGVTKDVEV 251
Query: 841 IVSTNAVGDIDLASVNGNE--VLAEHVNEL--------------GNDQTTEMIEEKKI-- 966
+S ++ S+N NE V E VN G++ ++EE+K+
Sbjct: 252 SLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQDEVAPINGGSENNLGILEEEKVNR 311
Query: 967 -DIELNESGFCYGEEEKERFNRILKSYEGTHNYHNFTTRTKADDPSAHRYIISFKADTTV 1143
D N SGFCYGE+E+ERFN ILK Y GTHN+HNFTTR K +DPSA R+IISF A TTV
Sbjct: 312 EDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNFTTRIKPEDPSAKRFIISFDASTTV 371
Query: 1144 TVDGIEFIKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIDIALQKDINITVPMAPEV 1323
V+G+EF+KCE+VGQSFMLHQIRKM+G+AVAIMRNCAPESLI+ ALQKD++ITVP APEV
Sbjct: 372 VVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVSITVPTAPEV 431
Query: 1324 GLYLDECFFTSYNQKWKDSHEEVSMKDYEAEAEDFKIKHIYSHIASSEHKDGAVGLWLHS 1503
GLYLDECFFTSYNQKWKD+HEEVSMK YE EAEDFK+++IY HIAS+E+K+G VGLWLHS
Sbjct: 432 GLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMQYIYPHIASTEYKEGTVGLWLHS 491
Query: 1504 LNYRNYPDLLVATTDGKTTTDVKNVEVEIKTDGRSAETDASTTEVKVTTD 1653
LN+RNYPDL DG+ T+ K VEV++ + TE++V T+
Sbjct: 492 LNHRNYPDL--GILDGEGVTNDKKVEVDM---------NDKKTEIEVVTE 530
>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Glycine
max]
Length = 548
Score = 634 bits (1635), Expect = e-179
Identities = 335/526 (63%), Positives = 395/526 (75%), Gaps = 21/526 (3%)
Frame = +1
Query: 127 PAAAEVEPNPKKLKMXXXXXXXXXXXXXXEKKPRYKRRKIAILFAYCGVGYQGMQKNPGA 306
P +AE EP PKKLKM K RYKRRK+AI FAYCGVGYQGMQKNPGA
Sbjct: 18 PVSAE-EPEPKKLKMSTTTSDDEETGT----KKRYKRRKVAIFFAYCGVGYQGMQKNPGA 72
Query: 307 KTIEGDLEEALYQAGAVPEHDRGVPKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGFIE 486
KTIEGDLEEALY +GAVPE DRGVPKR+DWARSARTDKGVSAVGQVVSGRFYIDPPG ++
Sbjct: 73 KTIEGDLEEALYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVD 132
Query: 487 RLQSNLPDQFKIFGYKRVTGSFNAKKFCDRRRYVYMLPVFALDPSAHRDRESVLASLGSG 666
RL SNLP Q +IFGYKRVT SFNAKKFCDRRRYVY++PVFALDPS HRDRE+V+ASLGSG
Sbjct: 133 RLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSG 192
Query: 667 GELVKCLECSERGRKVFGVMGKRNFDDEGEVNGVMSESGILSNSLSAVSGLESGDVKMIV 846
ELVKCLECSERGRKV G++G R E+ V E+GI SN S V + DV++ +
Sbjct: 193 NELVKCLECSERGRKVVGLVGNRK--QNLELEAVDVEAGISSNRDSGV----TEDVEVSL 246
Query: 847 STNAVGDIDLASVNGNE-------------VLAEHVNELGND--QTTEMIEEKKI---DI 972
S ++ S N N+ + E L + ++++EE+K+ D
Sbjct: 247 SKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDK 306
Query: 973 ELNESGFCYGEEEKERFNRILKSYEGTHNYHNFTTRTKADDPSAHRYIISFKADTTVTVD 1152
N S FCYGE+E+ERFN+ILK + GTHN+HNFTTRTKA+DP+A RYIISF A+TT+ V+
Sbjct: 307 PTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVE 366
Query: 1153 GIEFIKCEVVGQSFMLHQIRKMIGVAVAIMRNCAPESLIDIALQKDINITVPMAPEVGLY 1332
G+EF+KCEVVGQSFMLHQIRKMIG+AVAIMRNCAPESLID ALQ+D+NI VP APEVGLY
Sbjct: 367 GVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLY 426
Query: 1333 LDECFFTSYNQKWKDSHEEVSMKDYEAEAEDFKIKHIYSHIASSEHKDGAVGLWLHSLNY 1512
LDECFFTSYNQKWKD HEE+SMK YE EA++FK+K+IYSHIAS+E K+G V LWLHSLN+
Sbjct: 427 LDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYIYSHIASTEQKEGTVALWLHSLNH 485
Query: 1513 RNYPDLLVATTD---GKTTTDVKNVEVEIKTDGRSAETDASTTEVK 1641
RNYPDL V + + D K E TD +SA+ + +TT+ K
Sbjct: 486 RNYPDLRVINEEAIPNNKSADPK----EAITDNKSADPEDATTKNK 527