BLASTX nr result

ID: Cnidium21_contig00022823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022823
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...   251   7e-65
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]   251   7e-65
ref|XP_003595543.1| Pentatricopeptide repeat-containing protein ...   233   1e-59
ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|2...   231   4e-59
gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]        231   7e-59

>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  251 bits (640), Expect = 7e-65
 Identities = 123/181 (67%), Positives = 147/181 (81%)
 Frame = +2

Query: 2   NSMICGLAQNGRGMETLKALNEMIEEGTVPDYITFVGVLFACSHAGLVHEGRKSFNSMTE 181
           NSMI G AQNGRG E L+  N+M++EG  PDYI+F+G+LFACSH GLV EGR+ F SMT+
Sbjct: 430 NSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTK 489

Query: 182 EYGIKAGVEHYNCMVDLLGRAGQIEEAESLLNKSDRSTDSSLWAALLGACATSRNSTAAE 361
           +YGIK G+EHY+CMVDLLGRAG +EEAE L+  SD   DSSLWAALLGAC T  N   AE
Sbjct: 490 DYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAE 549

Query: 362 RIAKKMMELEPNNHLSYVLLANVYRDVGRWSDADMIRKLMQDRGVKKIMPGKSWIDIQGS 541
           RIAK++MELEP+ HLSYVLLANVY+ VGRW+DA  IR+LM+DRGV K MPGKSWI+ + +
Sbjct: 550 RIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNK-MPGKSWIETKNN 608

Query: 542 L 544
           L
Sbjct: 609 L 609


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  251 bits (640), Expect = 7e-65
 Identities = 123/181 (67%), Positives = 147/181 (81%)
 Frame = +2

Query: 2    NSMICGLAQNGRGMETLKALNEMIEEGTVPDYITFVGVLFACSHAGLVHEGRKSFNSMTE 181
            NSMI G AQNGRG E L+  N+M++EG  PDYI+F+G+LFACSH GLV EGR+ F SMT+
Sbjct: 489  NSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTK 548

Query: 182  EYGIKAGVEHYNCMVDLLGRAGQIEEAESLLNKSDRSTDSSLWAALLGACATSRNSTAAE 361
            +YGIK G+EHY+CMVDLLGRAG +EEAE L+  SD   DSSLWAALLGAC T  N   AE
Sbjct: 549  DYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAE 608

Query: 362  RIAKKMMELEPNNHLSYVLLANVYRDVGRWSDADMIRKLMQDRGVKKIMPGKSWIDIQGS 541
            RIAK++MELEP+ HLSYVLLANVY+ VGRW+DA  IR+LM+DRGV K MPGKSWI+ + +
Sbjct: 609  RIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNK-MPGKSWIETKNN 667

Query: 542  L 544
            L
Sbjct: 668  L 668


>ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355484591|gb|AES65794.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 958

 Score =  233 bits (594), Expect = 1e-59
 Identities = 121/178 (67%), Positives = 136/178 (76%)
 Frame = +2

Query: 2    NSMICGLAQNGRGMETLKALNEMIEEGTVPDYITFVGVLFACSHAGLVHEGRKSFNSMTE 181
            NSM+ G AQNGRG+E L    +MI+EG  PD ITFV VLFACSHAGLV EGRK F  M E
Sbjct: 758  NSMVSGFAQNGRGVEALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLMGE 817

Query: 182  EYGIKAGVEHYNCMVDLLGRAGQIEEAESLLNKSDRSTDSSLWAALLGACATSRNSTAAE 361
             YGIK  VEHYNCM+DLLGRAG I+EAE LL  +D   D SLWAALLGAC    +   AE
Sbjct: 818  -YGIKPVVEHYNCMIDLLGRAGFIDEAECLLENADCRYDKSLWAALLGACTKCSDYRTAE 876

Query: 362  RIAKKMMELEPNNHLSYVLLANVYRDVGRWSDADMIRKLMQDRGVKKIMPGKSWIDIQ 535
            R+A+KM+ELEP+ HLSYVLL N+YR+VGRW DA  IRKLM+DRGVKK M GKSWID Q
Sbjct: 877  RVARKMIELEPDFHLSYVLLNNIYREVGRWDDALEIRKLMEDRGVKK-MAGKSWIDSQ 933


>ref|XP_002319916.1| predicted protein [Populus trichocarpa] gi|222858292|gb|EEE95839.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  231 bits (590), Expect = 4e-59
 Identities = 116/176 (65%), Positives = 136/176 (77%)
 Frame = +2

Query: 2   NSMICGLAQNGRGMETLKALNEMIEEGTVPDYITFVGVLFACSHAGLVHEGRKSFNSMTE 181
           NSMI G AQNGRG E  +  +EMIEEG  PDYI+FVGVLFACSHAGLV +G+K F +MTE
Sbjct: 431 NSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQGKKYFAAMTE 490

Query: 182 EYGIKAGVEHYNCMVDLLGRAGQIEEAESLLNKSDRSTDSSLWAALLGACATSRNSTAAE 361
            Y IK G+EHYNCM+DLLGRAG +EEAE+L+  ++   + SLW  LLGACA S +S  AE
Sbjct: 491 VYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACAASPHSATAE 550

Query: 362 RIAKKMMELEPNNHLSYVLLANVYRDVGRWSDADMIRKLMQDRGVKKIMPGKSWID 529
           RIAKK +EL+P++HLSYV LANVYR VGRW DA  IR LM  RGV K MPG SWI+
Sbjct: 551 RIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGK-MPGTSWIE 605


>gb|AFW69092.1| hypothetical protein ZEAMMB73_188982 [Zea mays]
          Length = 630

 Score =  231 bits (588), Expect = 7e-59
 Identities = 112/180 (62%), Positives = 131/180 (72%)
 Frame = +2

Query: 2   NSMICGLAQNGRGMETLKALNEMIEEGTVPDYITFVGVLFACSHAGLVHEGRKSFNSMTE 181
           N+MICG AQNG G   +   NEM+  G  PDYI+F+GVLFACSH G+V EGR  FNSM++
Sbjct: 417 NAMICGCAQNGHGERAISLFNEMVRGGVKPDYISFIGVLFACSHTGMVEEGRNYFNSMSK 476

Query: 182 EYGIKAGVEHYNCMVDLLGRAGQIEEAESLLNKSDRSTDSSLWAALLGACATSRNSTAAE 361
           +YGI  G+EHYNC+VDLL R   +EEAE L+NKS    DSSLWAA+LGACAT  N   A 
Sbjct: 477 DYGIPPGIEHYNCIVDLLSRVELLEEAEDLVNKSQFRDDSSLWAAILGACATHTNPDVAV 536

Query: 362 RIAKKMMELEPNNHLSYVLLANVYRDVGRWSDADMIRKLMQDRGVKKIMPGKSWIDIQGS 541
           R+AKKMMELEP  HLSYVLL NVYR +G W DA  +RKLM+ R VKK  PG SWI+   S
Sbjct: 537 RVAKKMMELEPQYHLSYVLLENVYRTIGHWEDAVKVRKLMKSRKVKK-EPGTSWINANRS 595


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