BLASTX nr result

ID: Cnidium21_contig00022812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022812
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334816.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002306563.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002513964.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002302313.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_002334816.1| predicted protein [Populus trichocarpa] gi|222874982|gb|EEF12113.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 57/150 (38%), Positives = 72/150 (48%)
 Frame = -2

Query: 457 RCKKHPKHKQSPGVCSICLGERLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278
           +CKKHPKH+Q PGVCS+CL E+LSQ                                   
Sbjct: 19  KCKKHPKHEQPPGVCSVCLSEKLSQLPTSATTSRIASLNTMDCSSSCSLSSYSSFSSYSS 78

Query: 277 XXXXXXSKNYGVMGRSEGKGYVSFFKVSGKNIILTKSRSMEFYPPRPDRDHVNDDYRKKK 98
                    +G       KG    F  +GKN+ LTKSRS+ F P R ++D     + KKK
Sbjct: 79  PMHHFQYPTHG-------KGSFPLF-FNGKNMFLTKSRSLAFVPRRGNKDC----HEKKK 126

Query: 97  GGFWSKLIGSRSKKMDREGLMHSKTMRERL 8
           GGFWSKL+     K   EGL+HS+TMRER+
Sbjct: 127 GGFWSKLLRLPKGKKVEEGLVHSRTMRERV 156


>ref|XP_002306563.1| predicted protein [Populus trichocarpa] gi|222856012|gb|EEE93559.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 57/150 (38%), Positives = 72/150 (48%)
 Frame = -2

Query: 457 RCKKHPKHKQSPGVCSICLGERLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278
           +CKKHPKH+Q PGVCS+CL E+LSQ                                   
Sbjct: 19  KCKKHPKHEQPPGVCSVCLSEKLSQLPTSATTSRIASLNAMDCSSSCSLSSYSSFSSYSS 78

Query: 277 XXXXXXSKNYGVMGRSEGKGYVSFFKVSGKNIILTKSRSMEFYPPRPDRDHVNDDYRKKK 98
                    +G       KG    F  +GKN+ LTKSRS+ F P R ++D     + KKK
Sbjct: 79  PMHHFQYPTHG-------KGSFPLF-FNGKNMFLTKSRSLAFVPRRGNKDC----HEKKK 126

Query: 97  GGFWSKLIGSRSKKMDREGLMHSKTMRERL 8
           GGFWSKL+     K   EGL+HS+TMRER+
Sbjct: 127 GGFWSKLLRLPKGKKVEEGLVHSRTMRERV 156


>ref|XP_002513964.1| conserved hypothetical protein [Ricinus communis]
           gi|223547050|gb|EEF48547.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 174

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 59/154 (38%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
 Frame = -2

Query: 457 RCKKHPKHKQSPGVCSICLGERLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278
           RCKKHPKHKQSPGVCSICL E+LSQ                                   
Sbjct: 21  RCKKHPKHKQSPGVCSICLSEKLSQLSTTSSSSRATSSMDSLSSSSSLSSYSSSSCSSCS 80

Query: 277 XXXXXXSKNYGVMGRSEGKGYVSFFKVSGKNIILTKSRSMEFYPP---RPDRDHVNDDYR 107
                    +      EGKG  SF  +SGKN+ LT+SRS+ F      R +++ V++D++
Sbjct: 81  SPMHRYRPGH------EGKGSFSFL-LSGKNV-LTRSRSLVFISRTKIRGNKEKVDNDHK 132

Query: 106 KKKGGFWSKLIGSRSKKMDREGLMHSKTMRERLS 5
            KK GFWSKL      K   EGL+HS+T+ ER++
Sbjct: 133 IKKTGFWSKLRLRPKNKGMEEGLVHSRTIEERMT 166


>ref|XP_002302313.1| predicted protein [Populus trichocarpa] gi|222844039|gb|EEE81586.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 55/150 (36%), Positives = 68/150 (45%)
 Frame = -2

Query: 457 RCKKHPKHKQSPGVCSICLGERLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 278
           +CKKHPKHKQSPGVCS+CL E+LSQ                                   
Sbjct: 19  KCKKHPKHKQSPGVCSVCLSEKLSQLSTSASNSRSSSTNTMDCSSSSSLSSYYSSSSSCS 78

Query: 277 XXXXXXSKNYGVMGRSEGKGYVSFFKVSGKNIILTKSRSMEFYPPRPDRDHVNDDYRKKK 98
                    Y      +GKGY      +GK+  LTKSRS+       ++D       KKK
Sbjct: 79  YSSPMHRFQYP----PQGKGYSLPSLFNGKSNFLTKSRSLALVSIIGNKDCHEI---KKK 131

Query: 97  GGFWSKLIGSRSKKMDREGLMHSKTMRERL 8
           GG WSKL+     K   EGL+HS+TMRER+
Sbjct: 132 GGLWSKLLRRPKDKKVEEGLVHSRTMRERI 161


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