BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022791
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...   179   3e-43
ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...   171   7e-41
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu...   169   2e-40
ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containi...   169   3e-40

>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score =  179 bits (453), Expect = 3e-43
 Identities = 85/102 (83%), Positives = 96/102 (94%)
 Frame = +3

Query: 3   AASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVD 182
           AASY FLVNHLCK+GNVG+AMQLVE+ME+ GYP NTVTYN+LV+GLCMHG+LN+SLQF+D
Sbjct: 132 AASYTFLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLD 191

Query: 183 RLMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKGG 308
           RLM KGLVPNAFTYS LLEAAYKERGVNEA+RLLD+II KGG
Sbjct: 192 RLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGG 233



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/98 (30%), Positives = 55/98 (56%)
 Frame = +3

Query: 12  YAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRLM 191
           Y  +V+ LCKKGN   A  L+  M +YG+  ++ TY+SL+RGLC+ G L ++++    L 
Sbjct: 414 YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLE 473

Query: 192 HKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
                P+   ++ L+    K    + ++ + + +I+KG
Sbjct: 474 EDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKG 511



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/96 (27%), Positives = 55/96 (57%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           SY  L+  LCK+G +  A++L + +   G+  N V+YN L+R LC  G   ++ + +  +
Sbjct: 239 SYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEM 298

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDII 296
             +   P+  TY+IL+ +      + +A++++D+++
Sbjct: 299 NGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMM 334



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/97 (32%), Positives = 52/97 (53%)
 Frame = +3

Query: 3   AASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVD 182
           A +Y+ L+    K+  V  AM+L++ +   G   N V+YN L+ GLC  G + ++++   
Sbjct: 202 AFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFK 261

Query: 183 RLMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDI 293
            L  KG  PN  +Y+ILL +   E    EA  LL ++
Sbjct: 262 NLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEM 298



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 31/96 (32%), Positives = 47/96 (48%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           SY  L+  LC +G    A +L+  M       + VTYN L+  L  HG + Q+LQ +D +
Sbjct: 274 SYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEM 333

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDII 296
           M     P A +Y+ ++    KE  V   +  LD +I
Sbjct: 334 MMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMI 369


>ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|222860088|gb|EEE97635.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score =  176 bits (446), Expect = 2e-42
 Identities = 84/101 (83%), Positives = 94/101 (93%)
 Frame = +3

Query: 3   AASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVD 182
           AASY FLVN+LCK+GN+GHAMQLVE+MEE GYPTNTVTYNSLVRGLCMHG+LNQSLQ +D
Sbjct: 20  AASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNSLVRGLCMHGNLNQSLQLLD 79

Query: 183 RLMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
           +LM KGLVPN FTYS LLEAAYKERGVNEA++LLD+II KG
Sbjct: 80  KLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/99 (32%), Positives = 54/99 (54%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           +Y  LV  LC  GN+  ++QL++++   G   N  TY+ L+        +N++++ +D +
Sbjct: 57  TYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEI 116

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
           + KG  PN  +Y++LL    KE    EAIR   D+  KG
Sbjct: 117 IAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKG 155



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/95 (33%), Positives = 54/95 (56%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           +Y+FL+    K+  V  AM+L++ +   G+  N V+YN L+ GLC  G   ++++F   L
Sbjct: 92  TYSFLLEAAYKERGVNEAMKLLDEIIAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDL 151

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDI 293
             KG  PN  +Y+I+L +   E    EA +LL ++
Sbjct: 152 PSKGFNPNVVSYNIILRSLCHEGRWEEANQLLAEM 186



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/98 (29%), Positives = 55/98 (56%)
 Frame = +3

Query: 12  YAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRLM 191
           Y  ++  LC+KGN   A QL+  M ++G+  +  TY+SL+RGLC+ G L+++L+    L 
Sbjct: 302 YKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRLLE 361

Query: 192 HKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
                P    ++ L+    K    + ++ +L+ +++KG
Sbjct: 362 ENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKG 399



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/96 (29%), Positives = 49/96 (51%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           SY  ++  LC +G    A QL+  M+      + VTYN L+  L  HG +  + + +D +
Sbjct: 162 SYNIILRSLCHEGRWEEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEM 221

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDII 296
           +     P+A TY+ ++    KE  ++  I+ LD +I
Sbjct: 222 VRASFKPSATTYNPIIAHLCKEGKLDLVIKCLDQMI 257


>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
           gi|147852271|emb|CAN82234.1| hypothetical protein
           VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/101 (80%), Positives = 92/101 (91%)
 Frame = +3

Query: 6   ASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDR 185
           AS  FLVN+LCK+GNVG+AMQLVE+MEEYGYPTNTVTYNSLVRGLCMHG+L+QSLQ +D+
Sbjct: 133 ASCTFLVNNLCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDK 192

Query: 186 LMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKGG 308
            M KGLVPN FTYS LLEAAYKERG +EAIRLLD+I+ KGG
Sbjct: 193 FMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEIVAKGG 233



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/98 (28%), Positives = 56/98 (57%)
 Frame = +3

Query: 12  YAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRLM 191
           Y  +++ LC+KGN   A QL+  M +YG+  ++ TY+SL+RGLC  G L+++++    + 
Sbjct: 414 YKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIME 473

Query: 192 HKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
                P+   ++ L+    K R  + ++ + + ++ KG
Sbjct: 474 ENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKG 511



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/99 (28%), Positives = 53/99 (53%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           +Y  LV  LC  GN+  ++Q++++  + G   N  TY+ L+         +++++ +D +
Sbjct: 169 TYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEI 228

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
           + KG  PN  +Y++LL    KE    EA++   D+  KG
Sbjct: 229 VAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKG 267



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/95 (32%), Positives = 51/95 (53%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           +Y+FL+    K+     A++L++ +   G   N V+YN L+ GLC  G   +++QF   L
Sbjct: 204 TYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDL 263

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDI 293
             KG  PN  +Y+ILL +   E    +A  LL ++
Sbjct: 264 PSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEM 298



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/95 (29%), Positives = 49/95 (51%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           SY  L+  LCK+G    AMQ    +   G+  N V+YN L+R LC  G   ++ + +  +
Sbjct: 239 SYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEM 298

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDI 293
                 P+  T++IL+ +       ++A+ +LDD+
Sbjct: 299 DGGERSPSIVTFNILIGSLALHGQTDQALEVLDDM 333


>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/102 (78%), Positives = 93/102 (91%)
 Frame = +3

Query: 3   AASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVD 182
           A+SY FLV+ LC+KGNVG+AMQLV++MEEYGYPTNTVTYNSLVRGLCMHG+L QSLQ +D
Sbjct: 132 ASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLD 191

Query: 183 RLMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKGG 308
           RL+ KGLVPNA+TYS LLEAAYKERG +EA +LLD+II KGG
Sbjct: 192 RLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG 233



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/98 (33%), Positives = 59/98 (60%)
 Frame = +3

Query: 12  YAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRLM 191
           Y  ++  LC+KGN   A QL+  M +YG+  ++ TY+SL+RGLCM G LN++++ +  +M
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE-IFSVM 472

Query: 192 HKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
            +   P+   Y+ L+    K R  + A+ + + ++ KG
Sbjct: 473 EENNKPDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/99 (31%), Positives = 54/99 (54%)
 Frame = +3

Query: 9   SYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRL 188
           +Y  LV  LC  GN+  ++QL++R+ + G   N  TY+ L+         +++ + +D +
Sbjct: 169 TYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEI 228

Query: 189 MHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
           + KG  PN  +Y++LL    KE    +AIRL  ++  KG
Sbjct: 229 IAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKG 267


>ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/102 (78%), Positives = 92/102 (90%)
 Frame = +3

Query: 3   AASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVD 182
           AASY FLV+ LC+KGNVG+AMQLV++MEEYGYPTNT TYNSLVRGLCMHG+L QSLQ +D
Sbjct: 132 AASYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLD 191

Query: 183 RLMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKGG 308
           RL+ KGLVPNA+TYS LLEAAYKERG +EA +LLD+II KGG
Sbjct: 192 RLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGG 233



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/98 (32%), Positives = 59/98 (60%)
 Frame = +3

Query: 12  YAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDRLM 191
           Y  ++  LC+KGN   A QL+  M +YG+  ++ TY+SL+RGLCM G LN++++ +  +M
Sbjct: 414 YKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE-IFSVM 472

Query: 192 HKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
            + +  +   Y+ L+    K R  + A+ + + ++ KG
Sbjct: 473 EENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKG 510



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 30/100 (30%), Positives = 55/100 (55%)
 Frame = +3

Query: 6   ASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVDR 185
           A+Y  LV  LC  GN+  ++QL++R+ + G   N  TY+ L+         +++ + +D 
Sbjct: 168 ATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDE 227

Query: 186 LMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDIIDKG 305
           ++ KG  PN  +Y++LL    KE    +A++L  ++  KG
Sbjct: 228 IIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKG 267



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/97 (32%), Positives = 49/97 (50%)
 Frame = +3

Query: 3   AASYAFLVNHLCKKGNVGHAMQLVERMEEYGYPTNTVTYNSLVRGLCMHGSLNQSLQFVD 182
           A +Y+FL+    K+     A +L++ +   G   N V+YN L+ GLC  G    ++Q   
Sbjct: 202 AYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFR 261

Query: 183 RLMHKGLVPNAFTYSILLEAAYKERGVNEAIRLLDDI 293
            L  KG  PN  +Y+ILL +   E    EA  LL ++
Sbjct: 262 ELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEM 298