BLASTX nr result

ID: Cnidium21_contig00022743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022743
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   411   e-113
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   410   e-112
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              410   e-112
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   370   e-100
ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   370   e-100

>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  411 bits (1057), Expect = e-113
 Identities = 211/298 (70%), Positives = 243/298 (81%), Gaps = 5/298 (1%)
 Frame = +2

Query: 2    FTASYGMVLNLLAGAKITRGISEEDELSISRAGRTMEEARKLVEQSFGNYVGSNVMIAAK 181
            FTASYGMVLNLLAGAK+TR  SE DE+ +SRAGRT+EEARKL+EQSFGNYVGSNVM+AAK
Sbjct: 597  FTASYGMVLNLLAGAKVTRRSSELDEIKVSRAGRTLEEARKLIEQSFGNYVGSNVMLAAK 656

Query: 182  EELKNIESEIEMLNLEISDEAIDRKSKKALTTMAHKEITDLQQELKAEKRLRTDMRRKME 361
            EEL  IE EIE L  EIS+EAIDRKS+K L   A++EI +LQ+EL+AEKRLRT++RRKME
Sbjct: 657  EELARIEKEIETLTSEISEEAIDRKSQKLLAQTAYQEIAELQEELRAEKRLRTELRRKME 716

Query: 362  LERVSALRPLLKELEGGSLPFMCLQYSDSSGVQHLVAAVLLGSTDILDGQKLKKMVH--- 532
            LERV +L+PLLKELE G LPFM L YSDS GVQHLVAAV LG  D L+ +KLK MV    
Sbjct: 717  LERVFSLKPLLKELEDGHLPFMSLHYSDSDGVQHLVAAVYLGKVDTLNIEKLKSMVRDYD 776

Query: 533  --ALDLDGENIHINSTDGQNSEPYYYVALGSDNSWYLFTEKWIKSIYKTGFPNVALAQGD 706
              AL    EN  +    G++ +P Y+VALGSDNSWYLFTEKWI+ +Y+TGFPNVALA GD
Sbjct: 777  AFALKTVVENFEVGDIGGEDVKPSYHVALGSDNSWYLFTEKWIRMVYRTGFPNVALALGD 836

Query: 707  ALPRDIMMTLLEKEDTQWQKLVESDLGDLWCGEGSLETWSWSLNVPVLSSLSEKDEVL 880
            ALPR+IM  LL+K + QWQKL  S+LG LWC EGSLETWSWSLNVPVLSSLSE+DEVL
Sbjct: 837  ALPREIMTELLDKAEMQWQKLAVSELGGLWCLEGSLETWSWSLNVPVLSSLSEEDEVL 894


>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  410 bits (1055), Expect = e-112
 Identities = 205/299 (68%), Positives = 247/299 (82%), Gaps = 6/299 (2%)
 Frame = +2

Query: 2    FTASYGMVLNLLAGAKITRGISEEDELSISRAGRTMEEARKLVEQSFGNYVGSNVMIAAK 181
            FTASYGMVLNLLAGAK+TR +SE ++L + +AGRT+EEARKLVEQSFGNYVGSNVM+AAK
Sbjct: 611  FTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYVGSNVMLAAK 670

Query: 182  EELKNIESEIEMLNLEISDEAIDRKSKKALTTMAHKEITDLQQELKAEKRLRTDMRRKME 361
            EEL  +E EIE+L+ E++D+AIDRKS+K L+ MA+ EI +LQ+EL+AEKRLRT++RR+ME
Sbjct: 671  EELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRLRTELRRRME 730

Query: 362  LERVSALRPLLKELEGGSLPFMCLQYSDSSGVQHLVAAVLLGSTDILDGQKLKKMVHALD 541
            L R+SAL+ LLKE E G LPF+CLQY DS  VQHLV AV LG  D  DG K+K MV+  D
Sbjct: 731  LRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSKVKNMVYTND 790

Query: 542  LDGEN-----IHINSTDGQ-NSEPYYYVALGSDNSWYLFTEKWIKSIYKTGFPNVALAQG 703
                N     ++++ TD Q N +P YYVALGSDNSWYLFTEKWIK++Y+TGFPNVALAQG
Sbjct: 791  CFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRTGFPNVALAQG 850

Query: 704  DALPRDIMMTLLEKEDTQWQKLVESDLGDLWCGEGSLETWSWSLNVPVLSSLSEKDEVL 880
            DALPR+IM  LL+K D QW++L +S+LG LWC EGSLETWSWSLNVPVLSSLSE DEVL
Sbjct: 851  DALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSSLSEDDEVL 909


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  410 bits (1055), Expect = e-112
 Identities = 205/299 (68%), Positives = 247/299 (82%), Gaps = 6/299 (2%)
 Frame = +2

Query: 2    FTASYGMVLNLLAGAKITRGISEEDELSISRAGRTMEEARKLVEQSFGNYVGSNVMIAAK 181
            FTASYGMVLNLLAGAK+TR +SE ++L + +AGRT+EEARKLVEQSFGNYVGSNVM+AAK
Sbjct: 501  FTASYGMVLNLLAGAKVTRRLSESNDLKVLQAGRTLEEARKLVEQSFGNYVGSNVMLAAK 560

Query: 182  EELKNIESEIEMLNLEISDEAIDRKSKKALTTMAHKEITDLQQELKAEKRLRTDMRRKME 361
            EEL  +E EIE+L+ E++D+AIDRKS+K L+ MA+ EI +LQ+EL+AEKRLRT++RR+ME
Sbjct: 561  EELTKVEKEIEVLSSEVTDDAIDRKSRKLLSEMAYNEIANLQEELRAEKRLRTELRRRME 620

Query: 362  LERVSALRPLLKELEGGSLPFMCLQYSDSSGVQHLVAAVLLGSTDILDGQKLKKMVHALD 541
            L R+SAL+ LLKE E G LPF+CLQY DS  VQHLV AV LG  D  DG K+K MV+  D
Sbjct: 621  LRRMSALKLLLKESENGHLPFVCLQYKDSEDVQHLVPAVYLGKVDSFDGSKVKNMVYTND 680

Query: 542  LDGEN-----IHINSTDGQ-NSEPYYYVALGSDNSWYLFTEKWIKSIYKTGFPNVALAQG 703
                N     ++++ TD Q N +P YYVALGSDNSWYLFTEKWIK++Y+TGFPNVALAQG
Sbjct: 681  CFALNAVVTELNVDDTDSQPNGKPSYYVALGSDNSWYLFTEKWIKTVYRTGFPNVALAQG 740

Query: 704  DALPRDIMMTLLEKEDTQWQKLVESDLGDLWCGEGSLETWSWSLNVPVLSSLSEKDEVL 880
            DALPR+IM  LL+K D QW++L +S+LG LWC EGSLETWSWSLNVPVLSSLSE DEVL
Sbjct: 741  DALPREIMRALLDKADIQWEELAKSELGGLWCIEGSLETWSWSLNVPVLSSLSEDDEVL 799


>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
            chloroplastic-like [Cucumis sativus]
          Length = 1168

 Score =  370 bits (950), Expect = e-100
 Identities = 193/294 (65%), Positives = 231/294 (78%), Gaps = 1/294 (0%)
 Frame = +2

Query: 2    FTASYGMVLNLLAGAKITRGISEEDELSISRAGRTMEEARKLVEQSFGNYVGSNVMIAAK 181
            FTASYGMVLNLLAGAK+T   SE DE    +A RT+EEARKLVEQSFGNYVGSNVM+AAK
Sbjct: 614  FTASYGMVLNLLAGAKVTH-TSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAK 672

Query: 182  EELKNIESEIEMLNLEISDEAIDRKSKKALTTMAHKEITDLQQELKAEKRLRTDMRRKME 361
            EEL  IE EIEMLNLEI+DEAIDRKS+K L+ MA+ EI +LQ+EL+ EKR RT++R++ME
Sbjct: 673  EELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEME 732

Query: 362  LERVSALRPLLKELEGGSLPFMCLQYSDSSGVQHLVAAVLLGSTDILDGQKLKKMVHA-L 538
             +R+ AL  LL+ L  G LPF+CLQY DS GVQH +  VLLG+   +D  KL  M  A  
Sbjct: 733  SQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN---MDSSKLGNMFPADS 789

Query: 539  DLDGENIHINSTDGQNSEPYYYVALGSDNSWYLFTEKWIKSIYKTGFPNVALAQGDALPR 718
             L G   ++  T    +E  YYVALGSDNSWYLFTEKWIK++YKTGFPNVAL++GDALPR
Sbjct: 790  SLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPR 849

Query: 719  DIMMTLLEKEDTQWQKLVESDLGDLWCGEGSLETWSWSLNVPVLSSLSEKDEVL 880
            +IM +LL+KE  +W+KL +S+LG L C EGSLETWSWSLNVPVL+SLSE DE+L
Sbjct: 850  EIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELL 903


>ref|XP_004143826.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            ISE2, chloroplastic-like [Cucumis sativus]
          Length = 1193

 Score =  370 bits (950), Expect = e-100
 Identities = 193/294 (65%), Positives = 231/294 (78%), Gaps = 1/294 (0%)
 Frame = +2

Query: 2    FTASYGMVLNLLAGAKITRGISEEDELSISRAGRTMEEARKLVEQSFGNYVGSNVMIAAK 181
            FTASYGMVLNLLAGAK+T   SE DE    +A RT+EEARKLVEQSFGNYVGSNVM+AAK
Sbjct: 639  FTASYGMVLNLLAGAKVTH-TSEMDETKAFQAWRTLEEARKLVEQSFGNYVGSNVMLAAK 697

Query: 182  EELKNIESEIEMLNLEISDEAIDRKSKKALTTMAHKEITDLQQELKAEKRLRTDMRRKME 361
            EEL  IE EIEMLNLEI+DEAIDRKS+K L+ MA+ EI +LQ+EL+ EKR RT++R++ME
Sbjct: 698  EELVKIEKEIEMLNLEITDEAIDRKSRKFLSDMAYNEIAELQEELRLEKRHRTELRKEME 757

Query: 362  LERVSALRPLLKELEGGSLPFMCLQYSDSSGVQHLVAAVLLGSTDILDGQKLKKMVHA-L 538
             +R+ AL  LL+ L  G LPF+CLQY DS GVQH +  VLLG+   +D  KL  M  A  
Sbjct: 758  SQRICALNSLLRNLGDGHLPFLCLQYKDSEGVQHSIPTVLLGN---MDSSKLGNMFPADS 814

Query: 539  DLDGENIHINSTDGQNSEPYYYVALGSDNSWYLFTEKWIKSIYKTGFPNVALAQGDALPR 718
             L G   ++  T    +E  YYVALGSDNSWYLFTEKWIK++YKTGFPNVAL++GDALPR
Sbjct: 815  SLSGAESNLGITLEPGAESSYYVALGSDNSWYLFTEKWIKTVYKTGFPNVALSKGDALPR 874

Query: 719  DIMMTLLEKEDTQWQKLVESDLGDLWCGEGSLETWSWSLNVPVLSSLSEKDEVL 880
            +IM +LL+KE  +W+KL +S+LG L C EGSLETWSWSLNVPVL+SLSE DE+L
Sbjct: 875  EIMRSLLDKEGMKWEKLADSELGSLACMEGSLETWSWSLNVPVLNSLSENDELL 928


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