BLASTX nr result

ID: Cnidium21_contig00022691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022691
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303564.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
gb|ABK92794.1| unknown [Populus trichocarpa]                           64   2e-08
ref|XP_002867734.1| UBX domain-containing protein [Arabidopsis l...    63   2e-08
ref|NP_567675.1| UBX domain-containing protein [Arabidopsis thal...    63   2e-08
ref|NP_567380.2| Ara4-interacting protein [Arabidopsis thaliana]...    63   3e-08

>ref|XP_002303564.1| predicted protein [Populus trichocarpa] gi|222840996|gb|EEE78543.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/67 (50%), Positives = 39/67 (58%)
 Frame = +1

Query: 1   YPRHTPRPPSPSLTAQRLIREQQDDEYFASLQADXXXXXXXXXXXXXXXXXXXXXTESAL 180
           YPR  PRPPSPSL AQRLIREQQDDEY ASL AD                      ++AL
Sbjct: 408 YPRPVPRPPSPSLQAQRLIREQQDDEYLASLAADREKEMKAIEEAEARRVQEEVARKAAL 467

Query: 181 IEERQRQ 201
            EER+++
Sbjct: 468 EEERRKE 474


>gb|ABK92794.1| unknown [Populus trichocarpa]
          Length = 212

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 34/67 (50%), Positives = 39/67 (58%)
 Frame = +1

Query: 1   YPRHTPRPPSPSLTAQRLIREQQDDEYFASLQADXXXXXXXXXXXXXXXXXXXXXTESAL 180
           YPR  PRPPSPSL AQRLIREQQDDEY ASL AD                      ++AL
Sbjct: 33  YPRPVPRPPSPSLQAQRLIREQQDDEYLASLAADREKEMKAIEEAEARRVQEEVARKAAL 92

Query: 181 IEERQRQ 201
            EER+++
Sbjct: 93  EEERRKE 99


>ref|XP_002867734.1| UBX domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313570|gb|EFH43993.1| UBX domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   YPRHTPRPPSPSLTAQRLIREQQDDEYFASLQAD 102
           YP+ T RPPSPSLTAQRLIREQQDDEY ASL+AD
Sbjct: 360 YPQRTQRPPSPSLTAQRLIREQQDDEYLASLEAD 393


>ref|NP_567675.1| UBX domain-containing protein [Arabidopsis thaliana]
           gi|13430704|gb|AAK25974.1|AF360264_1 unknown protein
           [Arabidopsis thaliana] gi|23296844|gb|AAN13184.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659298|gb|AEE84698.1| UBX domain-containing
           protein [Arabidopsis thaliana]
          Length = 525

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   YPRHTPRPPSPSLTAQRLIREQQDDEYFASLQAD 102
           YP+ T RPPSPSLTAQRLIREQQDDEY ASL+AD
Sbjct: 353 YPQRTQRPPSPSLTAQRLIREQQDDEYLASLEAD 386


>ref|NP_567380.2| Ara4-interacting protein [Arabidopsis thaliana]
           gi|332657643|gb|AEE83043.1| Ara4-interacting protein
           [Arabidopsis thaliana]
          Length = 564

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 4   PRHTPRPPSPSLTAQRLIREQQDDEYFASLQAD 102
           PR  PRPPSPSLTAQRLIREQQDDEY ASLQAD
Sbjct: 386 PRAQPRPPSPSLTAQRLIREQQDDEYVASLQAD 418


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