BLASTX nr result

ID: Cnidium21_contig00022656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022656
         (1536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group] g...   127   8e-27
gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indi...   127   8e-27
ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-26
ref|NP_181677.1| apurinic endonuclease-redox protein [Arabidopsi...   125   2e-26
ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabido...   125   2e-26

>ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group]
            gi|55296319|dbj|BAD68137.1| putative DNA-(apurinic or
            apyrimidinic site) lyase (ARP) [Oryza sativa Japonica
            Group] gi|55297696|dbj|BAD68286.1| putative DNA-(apurinic
            or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica
            Group] gi|113534068|dbj|BAF06451.1| Os01g0801000 [Oryza
            sativa Japonica Group] gi|215715310|dbj|BAG95061.1|
            unnamed protein product [Oryza sativa Japonica Group]
            gi|222619408|gb|EEE55540.1| hypothetical protein
            OsJ_03774 [Oryza sativa Japonica Group]
          Length = 499

 Score =  127 bits (319), Expect = 8e-27
 Identities = 56/69 (81%), Positives = 63/69 (91%)
 Frame = +2

Query: 1031 GNKRSAGFTIEERQSFEMNFPSKGFVDTFRNQHPGVVGYTYWGYRHNGRKTNKGWRLDYF 1210
            GN+RSAGFTIEER+SFE NF SKGFVDTFR QHP VVGY+YWGYRHN RKTNKGWRLDYF
Sbjct: 407  GNRRSAGFTIEERESFETNFLSKGFVDTFRKQHPNVVGYSYWGYRHNARKTNKGWRLDYF 466

Query: 1211 LVSKTIPDK 1237
            LVS++I ++
Sbjct: 467  LVSESIAER 475


>gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indica Group]
          Length = 499

 Score =  127 bits (319), Expect = 8e-27
 Identities = 56/69 (81%), Positives = 63/69 (91%)
 Frame = +2

Query: 1031 GNKRSAGFTIEERQSFEMNFPSKGFVDTFRNQHPGVVGYTYWGYRHNGRKTNKGWRLDYF 1210
            GN+RSAGFTIEER+SFE NF SKGFVDTFR QHP VVGY+YWGYRHN RKTNKGWRLDYF
Sbjct: 407  GNRRSAGFTIEERESFETNFLSKGFVDTFRKQHPNVVGYSYWGYRHNARKTNKGWRLDYF 466

Query: 1211 LVSKTIPDK 1237
            LVS++I ++
Sbjct: 467  LVSESIAER 475


>ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|222867279|gb|EEF04410.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  126 bits (316), Expect = 2e-26
 Identities = 58/69 (84%), Positives = 60/69 (86%)
 Frame = +2

Query: 1031 GNKRSAGFTIEERQSFEMNFPSKGFVDTFRNQHPGVVGYTYWGYRHNGRKTNKGWRLDYF 1210
            GNKRSAGFT EERQSF  NF SKG VDTFR QHP VVGYTYWGYRH GRKTNKGWRLDYF
Sbjct: 336  GNKRSAGFTEEERQSFGSNFLSKGLVDTFRKQHPNVVGYTYWGYRHGGRKTNKGWRLDYF 395

Query: 1211 LVSKTIPDK 1237
            LVS++I DK
Sbjct: 396  LVSESIADK 404


>ref|NP_181677.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
            gi|8488963|sp|P45951.2|ARP_ARATH RecName: Full=Apurinic
            endonuclease-redox protein; AltName: Full=DNA-(apurinic
            or apyrimidinic site) lyase gi|3241944|gb|AAC23731.1|
            DNA-(apurinic or apyrimidinic site) lyase (ARP)
            [Arabidopsis thaliana] gi|330254890|gb|AEC09984.1|
            apurinic endonuclease-redox protein [Arabidopsis
            thaliana]
          Length = 536

 Score =  125 bits (315), Expect = 2e-26
 Identities = 57/66 (86%), Positives = 59/66 (89%)
 Frame = +2

Query: 1031 GNKRSAGFTIEERQSFEMNFPSKGFVDTFRNQHPGVVGYTYWGYRHNGRKTNKGWRLDYF 1210
            GNKRSAGFTIEERQSF  N   KGFVDTFR QHPGVVGYTYWGYRH GRKTNKGWRLDYF
Sbjct: 444  GNKRSAGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYF 503

Query: 1211 LVSKTI 1228
            LVS++I
Sbjct: 504  LVSQSI 509


>ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
            lyrata] gi|297325771|gb|EFH56191.1| apurinic
            endonuclease-redox protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 550

 Score =  125 bits (315), Expect = 2e-26
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = +2

Query: 1031 GNKRSAGFTIEERQSFEMNFPSKGFVDTFRNQHPGVVGYTYWGYRHNGRKTNKGWRLDYF 1210
            GNKR+AGFTIEERQSF  NF  KGFVDTFR QHPGVVGYTYWGYRH GRKTN+GWRLDYF
Sbjct: 458  GNKRNAGFTIEERQSFGANFLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNRGWRLDYF 517

Query: 1211 LVSKTI 1228
            LVS++I
Sbjct: 518  LVSESI 523


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