BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022601
         (1289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   213   7e-53
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   199   1e-48
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   174   4e-41
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...   159   1e-36
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...   159   1e-36

>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  213 bits (543), Expect = 7e-53
 Identities = 130/412 (31%), Positives = 200/412 (48%), Gaps = 6/412 (1%)
 Frame = -3

Query: 1287 WLPDDQNPYVTTESLS-LEGKKVCQLLRMDSNKWDEDVVKDVFEERDSRIILNIPLSEVA 1111
            WLPD  N  + T  ++  +G KV +L+      W ED ++D F  RD+ +IL+IPL   +
Sbjct: 407  WLPDSSNRLIITPPVAGFDGIKVDELIT--EGLWREDFIRDKFMARDADLILSIPLPMSS 464

Query: 1110 QPDGMYWSKEISGIYSVKSAYKMLQFLKGRWG---SEMNTGF-WRRLWQLKIQPKVKDLL 943
            + D + WS +  G Y+ +S Y  L+  +       S++++ F W +LW++   PK+ +  
Sbjct: 465  REDQISWSFDARGEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFA 524

Query: 942  WRACVECLPTMVQLSLKQVPVLRDCLGCRAGEESILHCLVKCQFAASCLQLVSTATQGIQ 763
            WRA   CLPT   L+++ V     C  CR+  E+ LH LV+C  A         A     
Sbjct: 525  WRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLHALVECVAARDVWDESGLAMLQGN 584

Query: 762  AESFADWFDKVAKRVDKEKLGEIAVVCWGIWRARNDRVWKNLNPRVNEVVSTCLAYLKQW 583
              SF DW   +    D     +   VCWG+W  RND VW        +VV+ C   L+ W
Sbjct: 585  FGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWNGRIWHSQQVVNGCFTMLESW 644

Query: 582  NIA-QNREKLLPLPSDLEKDGAVSWVKPAENQLKINVDAALFDERGQFGVGMIARDYRGM 406
              A +     + +PS   K     W KP    +KINVD A+F ++G   +G + RD++G 
Sbjct: 645  FHANETLATAVTVPSYSSK-----WQKPDYGWIKINVDGAVFPDKG--AIGAVFRDHQGR 697

Query: 405  IVEARTWLQNVSVNSVLAEIMGIREALSWIKQKNWRNVVLETDCLVAVNAIRSSLDMQSP 226
             +              + E +G+RE LSWI +++   +V+ETDCL  V AI+      + 
Sbjct: 698  FMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTS 757

Query: 225  FGLVASECRKFLNDMSDISFLFVYRSANKLAHSLARASCSYPECSFSGRNVP 70
            FG +  +C   L  + D+  ++  RSAN  AH LA  +CS+      G   P
Sbjct: 758  FGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLANGACSFTSLHIWGYTPP 809


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 483

 Score =  199 bits (507), Expect = 1e-48
 Identities = 122/396 (30%), Positives = 187/396 (47%), Gaps = 2/396 (0%)
 Frame = -3

Query: 1287 WLPDDQNPYVTTESLS-LEGKKVCQLLRMDSNKWDEDVVKDVFEERDSRIILNIPLSEVA 1111
            WL D  N ++ T     L  + VC LL+  +  WD++++ D+F ERD  +I +I LS   
Sbjct: 86   WLLDASNGFIETNLPDELRLQPVCSLLKPGTCDWDQEILNDLFSERDKNLINSIVLSPTV 145

Query: 1110 QPDGMYWSKEISGIYSVKSAYKMLQ-FLKGRWGSEMNTGFWRRLWQLKIQPKVKDLLWRA 934
              D ++W K+  G +SVK  Y++ Q      + S  N   WRRLW+L I  K K  +WRA
Sbjct: 146  GTDQLFWFKDPKGKFSVKDVYRVQQPDFSVLYPS--NVVVWRRLWKLNIAAKCKVFMWRA 203

Query: 933  CVECLPTMVQLSLKQVPVLRDCLGCRAGEESILHCLVKCQFAASCLQLVSTATQGIQAES 754
                LP    L +++V     C  C +  E+I+H LV C       + V+      Q  +
Sbjct: 204  LTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLCDVTTQSWKYVNLYQFLSQVSN 263

Query: 753  FADWFDKVAKRVDKEKLGEIAVVCWGIWRARNDRVWKNLNPRVNEVVSTCLAYLKQWNIA 574
              +    V +  D   +    V+ W +W   ND VW         V S   ++L QW  A
Sbjct: 264  LLEGARSVFEHFDDSIVASFVVLWWSLWTNMNDVVWNGKKLSWRAVASRASSFLFQWGKA 323

Query: 573  QNREKLLPLPSDLEKDGAVSWVKPAENQLKINVDAALFDERGQFGVGMIARDYRGMIVEA 394
            +       L       G   W KPA  + K+NVDA+   ERG+ G   + RD  G+ +  
Sbjct: 324  RKLTDYHQLGRHFA-GGDCLWQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITG 382

Query: 393  RTWLQNVSVNSVLAEIMGIREALSWIKQKNWRNVVLETDCLVAVNAIRSSLDMQSPFGLV 214
               ++    N  +AE   ++EALSWI  K    V +ETDCL  +  +   L   S    +
Sbjct: 383  VLIIRPYIANPDVAEAWALKEALSWIHAKGMEEVQIETDCLRNIELLEEELHPNSYLLCL 442

Query: 213  ASECRKFLNDMSDISFLFVYRSANKLAHSLARASCS 106
              +C+  L  ++  + +FVY SAN +AH +++A+CS
Sbjct: 443  LKDCQDLLRVLNRCNLVFVYGSANTVAHMISKATCS 478


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score =  174 bits (441), Expect = 4e-41
 Identities = 98/321 (30%), Positives = 155/321 (48%)
 Frame = -3

Query: 1239 LEGKKVCQLLRMDSNKWDEDVVKDVFEERDSRIILNIPLSEVAQPDGMYWSKEISGIYSV 1060
            LE   V  +L+++  +WD D++ D+F  RD R+I +IPL+     D  YW  +  G Y V
Sbjct: 350  LEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWLFDDKGNYLV 409

Query: 1059 KSAYKMLQFLKGRWGSEMNTGFWRRLWQLKIQPKVKDLLWRACVECLPTMVQLSLKQVPV 880
            K+ Y++LQ   GR      T FW + W+LKI  KV++L+W+ C  C+ T + L ++ V +
Sbjct: 410  KNCYRLLQGDLGR----PETSFWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDL 465

Query: 879  LRDCLGCRAGEESILHCLVKCQFAASCLQLVSTATQGIQAESFADWFDKVAKRVDKEKLG 700
               C  C    E++ H L  C  A  C  L+              W         ++   
Sbjct: 466  DPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCA 525

Query: 699  EIAVVCWGIWRARNDRVWKNLNPRVNEVVSTCLAYLKQWNIAQNREKLLPLPSDLEKDGA 520
            ++A+VC  +W  RN  VW   +     V+S     L+Q   AQ+ ++ +  P     D  
Sbjct: 526  KMALVCGSLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVT 585

Query: 519  VSWVKPAENQLKINVDAALFDERGQFGVGMIARDYRGMIVEARTWLQNVSVNSVLAEIMG 340
              W KP    LKIN D ALF ++G+ G+G + RD  G ++ AR+  +     +  AE + 
Sbjct: 586  RKWTKPELGWLKINTDTALFLKQGRIGLGCVVRDSNGRMIMARSERRVGRFTAREAEALS 645

Query: 339  IREALSWIKQKNWRNVVLETD 277
            ++EALS++K         E D
Sbjct: 646  MKEALSYMKDYQMDKCFFELD 666


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score =  159 bits (402), Expect = 1e-36
 Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 18/408 (4%)
 Frame = -3

Query: 1287 WLPDDQNPYVTTESLSLEGKKVCQLLRMDSNKWDEDVVKDVFEERDSRIILNIPLSEVAQ 1108
            W+P  +   VTT S       V  L+  D+  WD D+++ +F    ++ IL IP+S    
Sbjct: 954  WIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGD 1013

Query: 1107 PDGMYWSKEISGIYSVKSAYKMLQFLKGRWGSEMNTGF------------WRRLWQLKIQ 964
             D   W  +  G+YSV+SAY + +  +  +  + N+G             W+ LW++   
Sbjct: 1014 ADFASWPHDKLGLYSVRSAYNLARS-EAFFADQSNSGRGMASRLLESQKDWKGLWKINAP 1072

Query: 963  PKVKDLLWRACVECLPTMVQLSLKQVPVLRDCLGCRAGEESILHCLVKCQFAASCLQ--- 793
             K+K  LWRA  ECL T  QL  + +P    C+ C   ++++ H  + C FAA   +   
Sbjct: 1073 GKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-DDTVEHVFLFCPFAAQIWEEIK 1131

Query: 792  ---LVSTATQGIQAESFADWFDKVAKRVDKEKLGEIAVVCWGIWRARNDRVWKNLNPRVN 622
                V     G    +   W     KR        +AV  W IW ARN+    N      
Sbjct: 1132 GKCAVKLGRNGFS--TMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTKNNNGTVHPQ 1189

Query: 621  EVVSTCLAYLKQWNIAQNREKLLPLPSDLEKDGAVSWVKPAENQLKINVDAALFDERGQF 442
             VV   L+Y+    I ++  K +             W  P  +   IN DAA+F      
Sbjct: 1190 RVVIKILSYVDM--ILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTM 1247

Query: 441  GVGMIARDYRGMIVEARTWLQNVSVNSVLAEIMGIREALSWIKQKNWRNVVLETDCLVAV 262
            GVG + RD  G  + A + + +  V   LAE + IR AL   K++   ++V+ +DCL  +
Sbjct: 1248 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVI 1307

Query: 261  NAIRSSLDMQSPFGLVASECRKFLNDMSDISFLFVYRSANKLAHSLAR 118
              I++S   +S  G V  + +K  +     SF+ V R +N  AHSLAR
Sbjct: 1308 RRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLAR 1355


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score =  159 bits (402), Expect = 1e-36
 Identities = 117/408 (28%), Positives = 181/408 (44%), Gaps = 18/408 (4%)
 Frame = -3

Query: 1287 WLPDDQNPYVTTESLSLEGKKVCQLLRMDSNKWDEDVVKDVFEERDSRIILNIPLSEVAQ 1108
            W+P  +   VTT S       V  L+  D+  WD D+++ +F    ++ IL IP+S    
Sbjct: 911  WIPGFRPQLVTTLSPFPTDATVSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGD 970

Query: 1107 PDGMYWSKEISGIYSVKSAYKMLQFLKGRWGSEMNTGF------------WRRLWQLKIQ 964
             D   W  +  G+YSV+SAY + +  +  +  + N+G             W+ LW++   
Sbjct: 971  ADFASWPHDKLGLYSVRSAYNLARS-EAFFADQSNSGRGMASRLLESQKDWKGLWKINAP 1029

Query: 963  PKVKDLLWRACVECLPTMVQLSLKQVPVLRDCLGCRAGEESILHCLVKCQFAASCLQ--- 793
             K+K  LWRA  ECL T  QL  + +P    C+ C   ++++ H  + C FAA   +   
Sbjct: 1030 GKMKITLWRAAHECLATGFQLRRRHIPSTDGCVFCNR-DDTVEHVFLFCPFAAQIWEEIK 1088

Query: 792  ---LVSTATQGIQAESFADWFDKVAKRVDKEKLGEIAVVCWGIWRARNDRVWKNLNPRVN 622
                V     G    +   W     KR        +AV  W IW ARN+    N      
Sbjct: 1089 GKCAVKLGRNGFS--TMRQWIFDFLKRGSSHANTLLAVTFWHIWEARNNTKNNNGTVHPQ 1146

Query: 621  EVVSTCLAYLKQWNIAQNREKLLPLPSDLEKDGAVSWVKPAENQLKINVDAALFDERGQF 442
             VV   L+Y+    I ++  K +             W  P  +   IN DAA+F      
Sbjct: 1147 RVVIKILSYVDM--ILKHNTKTVDGQRGGNTQAIPRWQPPPASVWMINSDAAIFSSSRTM 1204

Query: 441  GVGMIARDYRGMIVEARTWLQNVSVNSVLAEIMGIREALSWIKQKNWRNVVLETDCLVAV 262
            GVG + RD  G  + A + + +  V   LAE + IR AL   K++   ++V+ +DCL  +
Sbjct: 1205 GVGALIRDNTGKCLVACSEMISDVVLPELAEALAIRRALGLAKEEGLEHIVMASDCLTVI 1264

Query: 261  NAIRSSLDMQSPFGLVASECRKFLNDMSDISFLFVYRSANKLAHSLAR 118
              I++S   +S  G V  + +K  +     SF+ V R +N  AHSLAR
Sbjct: 1265 RRIQTSGRDRSGVGCVIEDIKKLASTFVLCSFMHVNRLSNLAAHSLAR 1312