BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022579
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   125   5e-27
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   124   1e-26
emb|CBI22758.3| unnamed protein product [Vitis vinifera]              121   7e-26
ref|NP_568435.2| transducin/WD40 domain-containing protein [Arab...   120   1e-25
ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyra...   119   2e-25

>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  125 bits (313), Expect = 5e-27
 Identities = 62/99 (62%), Positives = 77/99 (77%), Gaps = 6/99 (6%)
 Frame = +2

Query: 62  QEQARCDWDFALSTVVSNSSSVIGQVSDALGVTEFDPSDTFLATGGIARKIRIYNLKSLL 241
           +E+AR DW+F+LSTVVS+SS   G  +D +G+ EFDPSD  + TGGIARKIR+Y++KS L
Sbjct: 31  EERARRDWEFSLSTVVSSSSD--GASTDTIGIIEFDPSDNLVVTGGIARKIRVYSIKSFL 88

Query: 242 SS---THG---VTFLDHASACDYYICTPAKLSSLRWKPG 340
           S    +HG   VT+L H  ACDYY+CTPAKLSSLRWKPG
Sbjct: 89  SDENHSHGERKVTWLQHNDACDYYVCTPAKLSSLRWKPG 127


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  124 bits (310), Expect = 1e-26
 Identities = 62/99 (62%), Positives = 75/99 (75%), Gaps = 6/99 (6%)
 Frame = +2

Query: 62  QEQARCDWDFALSTVVSNSSSVIGQVSDALGVTEFDPSDTFLATGGIARKIRIYNLKSLL 241
           +E+ARCDW+F LSTVV++SS+  G  +D +GV EFDPSD  +ATGGIARKIR+Y++KSLL
Sbjct: 31  EERARCDWEFNLSTVVTSSST--GASTDTIGVIEFDPSDNLVATGGIARKIRVYSVKSLL 88

Query: 242 ------SSTHGVTFLDHASACDYYICTPAKLSSLRWKPG 340
                    H V  L H +ACDYYI TPAKLSSLRWKPG
Sbjct: 89  PGENHSHGEHNVKLLQHNNACDYYIWTPAKLSSLRWKPG 127


>emb|CBI22758.3| unnamed protein product [Vitis vinifera]
          Length = 282

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 72/93 (77%)
 Frame = +2

Query: 62  QEQARCDWDFALSTVVSNSSSVIGQVSDALGVTEFDPSDTFLATGGIARKIRIYNLKSLL 241
           +E+ARCDW+F LSTVV++SS+  G  +D +GV EFDPSD  +ATGGIARKIR+Y+ K   
Sbjct: 31  EERARCDWEFNLSTVVTSSST--GASTDTIGVIEFDPSDNLVATGGIARKIRVYSRK--- 85

Query: 242 SSTHGVTFLDHASACDYYICTPAKLSSLRWKPG 340
                VT+L H  ACDYY+CTPAKLSSLRWKPG
Sbjct: 86  -----VTWLQHNDACDYYVCTPAKLSSLRWKPG 113


>ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10176840|dbj|BAB10046.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005822|gb|AED93205.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 368

 Score =  120 bits (300), Expect = 1e-25
 Identities = 63/110 (57%), Positives = 78/110 (70%), Gaps = 4/110 (3%)
 Frame = +2

Query: 23  RQDQNQGVLLQENQEQARCDWDFALSTVVSNSSSVIGQVSDALGVTEFDPSDTFLATGGI 202
           +Q Q Q     + QE+AR +WD +LSTVVS+SSS     SD +G  EFDP+D  +AT GI
Sbjct: 8   KQQQEQA----QQQEEARYEWDLSLSTVVSSSSS---SASDVIGAIEFDPTDNIVATAGI 60

Query: 203 ARKIRIYNLKSLLS----STHGVTFLDHASACDYYICTPAKLSSLRWKPG 340
           +RKIR Y L SLL     S  GV+F+D A+AC+YYICTPAKLSSLRW+PG
Sbjct: 61  SRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPG 110


>ref|XP_002872071.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317908|gb|EFH48330.1| nucleotide binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 4/100 (4%)
 Frame = +2

Query: 53  QENQEQARCDWDFALSTVVSNSSSVIGQVSDALGVTEFDPSDTFLATGGIARKIRIYNLK 232
           QE +E+A+ +WD +LSTVVS+SSS     SD +G  EFDP+D  +AT GI+RKIR Y L 
Sbjct: 11  QEQEEEAKHEWDLSLSTVVSSSSS---SASDVIGAIEFDPTDNIVATAGISRKIRFYGLP 67

Query: 233 SLLS----STHGVTFLDHASACDYYICTPAKLSSLRWKPG 340
           SLL     S  GV+F+D A+AC+YYICTPAKLSSLRW+PG
Sbjct: 68  SLLRTNAVSGTGVSFVDQATACEYYICTPAKLSSLRWRPG 107