BLASTX nr result

ID: Cnidium21_contig00022569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022569
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL99016.1| AP-1 complex subunit mu, partial [Silene latifoli...   244   1e-62
ref|XP_002311769.1| predicted protein [Populus trichocarpa] gi|2...   242   4e-62
ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis ...   242   4e-62
emb|CAN71032.1| hypothetical protein VITISV_035320 [Vitis vinifera]   242   4e-62
ref|XP_002314604.1| predicted protein [Populus trichocarpa] gi|2...   241   9e-62

>gb|AEL99016.1| AP-1 complex subunit mu, partial [Silene latifolia]
           gi|343172627|gb|AEL99017.1| AP-1 complex subunit mu,
           partial [Silene latifolia]
          Length = 428

 Score =  244 bits (622), Expect = 1e-62
 Identities = 115/134 (85%), Positives = 129/134 (96%)
 Frame = -3

Query: 404 MSGAASALFILDIKGRVLVWRDYRGDVTAVQAEKCFTKLIDKEGEPDTQNPVVHDDGVTY 225
           MSGAASALF+LDIKGRVL+WRDYRGDVTA QAE+ FTKLI+KEG+P +QNPV +D+GVTY
Sbjct: 1   MSGAASALFLLDIKGRVLIWRDYRGDVTAAQAERFFTKLIEKEGDPQSQNPVAYDNGVTY 60

Query: 224 MFIQHNNVYLMAASRQNCNAASIFLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 45
           M++QHNNVYLMAA+RQNCNAASI LFLHR+VDVFKHYFEELEEESLRDNFVVVYELLDE+
Sbjct: 61  MYMQHNNVYLMAAARQNCNAASILLFLHRLVDVFKHYFEELEEESLRDNFVVVYELLDEI 120

Query: 44  MDFGYPQYTEAKIL 3
           MDFGYPQ+TEAKIL
Sbjct: 121 MDFGYPQFTEAKIL 134


>ref|XP_002311769.1| predicted protein [Populus trichocarpa] gi|222851589|gb|EEE89136.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  242 bits (618), Expect = 4e-62
 Identities = 116/134 (86%), Positives = 129/134 (96%)
 Frame = -3

Query: 404 MSGAASALFILDIKGRVLVWRDYRGDVTAVQAEKCFTKLIDKEGEPDTQNPVVHDDGVTY 225
           M+GAASALF+LDIKGRVLVWRDYRGDV+AVQAE+ FTK I+KEG+P +Q+PVV+D+GV+Y
Sbjct: 1   MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFTKFIEKEGDPQSQDPVVYDNGVSY 60

Query: 224 MFIQHNNVYLMAASRQNCNAASIFLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 45
           MFIQH+NVYLMAASRQNCNAAS+  FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61  MFIQHSNVYLMAASRQNCNAASLISFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120

Query: 44  MDFGYPQYTEAKIL 3
           MDFGYPQYTEAKIL
Sbjct: 121 MDFGYPQYTEAKIL 134


>ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis vinifera]
           gi|296083422|emb|CBI23375.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  242 bits (618), Expect = 4e-62
 Identities = 116/134 (86%), Positives = 129/134 (96%)
 Frame = -3

Query: 404 MSGAASALFILDIKGRVLVWRDYRGDVTAVQAEKCFTKLIDKEGEPDTQNPVVHDDGVTY 225
           M+GAASALF+LDIKGRVLVWRDYRGDV+AVQAE+ F KL++KEG+P++Q+PVV+D+GVTY
Sbjct: 1   MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFAKLMEKEGDPESQDPVVYDNGVTY 60

Query: 224 MFIQHNNVYLMAASRQNCNAASIFLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 45
           MFIQHNNV+LM ASRQNCNAAS  LFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61  MFIQHNNVFLMTASRQNCNAASHLLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120

Query: 44  MDFGYPQYTEAKIL 3
           MDFGYPQYTEAKIL
Sbjct: 121 MDFGYPQYTEAKIL 134


>emb|CAN71032.1| hypothetical protein VITISV_035320 [Vitis vinifera]
          Length = 230

 Score =  242 bits (618), Expect = 4e-62
 Identities = 116/134 (86%), Positives = 129/134 (96%)
 Frame = -3

Query: 404 MSGAASALFILDIKGRVLVWRDYRGDVTAVQAEKCFTKLIDKEGEPDTQNPVVHDDGVTY 225
           M+GAASALF+LDIKGRVLVWRDYRGDV+AVQAE+ F KL++KEG+P++Q+PVV+D+GVTY
Sbjct: 1   MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFAKLMEKEGDPESQDPVVYDNGVTY 60

Query: 224 MFIQHNNVYLMAASRQNCNAASIFLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 45
           MFIQHNNV+LM ASRQNCNAAS  LFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61  MFIQHNNVFLMTASRQNCNAASHLLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120

Query: 44  MDFGYPQYTEAKIL 3
           MDFGYPQYTEAKIL
Sbjct: 121 MDFGYPQYTEAKIL 134


>ref|XP_002314604.1| predicted protein [Populus trichocarpa] gi|222863644|gb|EEF00775.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  241 bits (615), Expect = 9e-62
 Identities = 115/134 (85%), Positives = 129/134 (96%)
 Frame = -3

Query: 404 MSGAASALFILDIKGRVLVWRDYRGDVTAVQAEKCFTKLIDKEGEPDTQNPVVHDDGVTY 225
           M+GAASALF+LDIKGRVLVWRDYRGDV+AVQAE+ FTKLI+KEG+P +Q+PVV+D+GV+Y
Sbjct: 1   MAGAASALFLLDIKGRVLVWRDYRGDVSAVQAERFFTKLIEKEGDPQSQDPVVYDNGVSY 60

Query: 224 MFIQHNNVYLMAASRQNCNAASIFLFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 45
           M+IQH+NVYLM ASRQNCNAAS+  FLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM
Sbjct: 61  MYIQHSNVYLMTASRQNCNAASLLSFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEM 120

Query: 44  MDFGYPQYTEAKIL 3
           MDFGYPQYTEAKIL
Sbjct: 121 MDFGYPQYTEAKIL 134


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