BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022552
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin...   335   9e-90
ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|2...   306   5e-81
ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu...   294   2e-77
ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|2...   284   3e-74
ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containin...   248   3e-63

>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            1-like [Vitis vinifera]
          Length = 800

 Score =  335 bits (860), Expect = 9e-90
 Identities = 170/294 (57%), Positives = 218/294 (74%), Gaps = 15/294 (5%)
 Frame = -1

Query: 1064 PAVQTSSIRTSAVERNVKDNRSTVPAKFQMNPVSE---SYRYESYETRAHKVDRDACAME 894
            PAV+ S+   SA ERNVKD+R     + +MN   E   +Y +E+YETR H+ +RDAC++E
Sbjct: 506  PAVKCSTPGISAAERNVKDDRCIGSGRQEMNSTMEPPPNYHHENYETRVHRANRDACSIE 565

Query: 893  SQRAARTRSLVTNWEKKDRSPGHEGFASSNISGAVSSMNTLPVNV------------EME 750
             Q+  RTRSLV NWEK++ SP +EG  SSN SG VS+ N LP +             E  
Sbjct: 566  VQKGGRTRSLVANWEKREISPTYEGQTSSNFSGTVSASNMLPFSAVKQRGYTPSTEKEAV 625

Query: 749  PGNEEDTISALTEQHNQFVGSLQSRLAKLEMIHKYWERNDIKGAIGMSQKMSDNAVLADI 570
            P ++ED I+ + EQH QFVGS+QSRL+KL+++H++WERNDIKGAIG  +KM+D++V AD+
Sbjct: 626  PASDEDAITDIMEQHGQFVGSIQSRLSKLQVVHRFWERNDIKGAIGAMEKMADHSVFADV 685

Query: 569  VSILREKPDIVTLDICTCVLPLLTSLLESEMDQHRGVSLEMLLKLVKVFGXXXXXXXXXX 390
            +SILREKPD+VTL+ICT +LPLLTSLLESEMD+H G+SLEMLLKLV++FG          
Sbjct: 686  ISILREKPDVVTLEICTSLLPLLTSLLESEMDRHLGISLEMLLKLVRIFGSVIHSTLSAS 745

Query: 389  XSVGVDIEAEQRLERCNLCYVELEKVKRCLPVLTRRGGTTAKSAHVLSLALQEV 228
             SVGVDI+AEQRLERCNLC++ELEK+K CLP LTRRGG+ AK A  L+LAL EV
Sbjct: 746  SSVGVDIQAEQRLERCNLCFIELEKIKHCLPALTRRGGSVAKLAQELNLALLEV 799


>ref|XP_002311885.1| predicted protein [Populus trichocarpa] gi|222851705|gb|EEE89252.1|
            predicted protein [Populus trichocarpa]
          Length = 802

 Score =  306 bits (785), Expect = 5e-81
 Identities = 159/295 (53%), Positives = 212/295 (71%), Gaps = 15/295 (5%)
 Frame = -1

Query: 1064 PAVQTSSIRTSAVERNVKDNRSTVPAKFQMNPVSE---SYRYESYETRAHKVDRDACAME 894
            PAV+ S    S  ERN+ D+RS     ++ +  +E   SY+ E+ ETR HK++RDA  +E
Sbjct: 508  PAVKASIHGISTAERNIGDDRSMGSGNYESDSTTEPPTSYQEENCETRGHKINRDAPTIE 567

Query: 893  SQRAARTRSLVTNWEKKDRSPGHEGFASSNISGAVSSMNTLPVNVEMEPGN--------- 741
            SQ+  R RSL+ NWEK+ RS  +EG  S   +G  S +N LP+N+  + G          
Sbjct: 568  SQKGGRMRSLMINWEKRGRSSSYEGPTSGTSTGTGSVVNVLPLNMFKQRGRTPSIEKETV 627

Query: 740  ---EEDTISALTEQHNQFVGSLQSRLAKLEMIHKYWERNDIKGAIGMSQKMSDNAVLADI 570
               +ED I+ L EQH+QFV S+QSR AKL+++++YWERND+KGAIG  +KM+D+AVL+D+
Sbjct: 628  SAFDEDVIADLMEQHDQFVSSMQSRSAKLQVVYRYWERNDVKGAIGAMEKMADHAVLSDV 687

Query: 569  VSILREKPDIVTLDICTCVLPLLTSLLESEMDQHRGVSLEMLLKLVKVFGXXXXXXXXXX 390
            +SI+ +K DIVTLDICTC+LPLLT++LES+MD+H  +SL+MLLKLV++FG          
Sbjct: 688  ISIVADKIDIVTLDICTCLLPLLTNMLESDMDRHLSISLDMLLKLVRMFGSMIYSTLSAS 747

Query: 389  XSVGVDIEAEQRLERCNLCYVELEKVKRCLPVLTRRGGTTAKSAHVLSLALQEVS 225
             SVGVDIEAEQRLERCN+C+VELEKVKRCL  LTR+GG+ AK AH L+LALQEVS
Sbjct: 748  TSVGVDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVAKFAHELNLALQEVS 802


>ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
            gi|223547170|gb|EEF48666.1| katanin P80 subunit, putative
            [Ricinus communis]
          Length = 803

 Score =  294 bits (753), Expect = 2e-77
 Identities = 151/293 (51%), Positives = 201/293 (68%), Gaps = 15/293 (5%)
 Frame = -1

Query: 1058 VQTSSIRTSAVERNVKDNRSTVPAKFQMNPVSE---SYRYESYETRAHKVDRDACAMESQ 888
            V+ S    S  +RN+K++R     K   + ++E   SY+ E+YETR HK++RDA ++E Q
Sbjct: 511  VKGSIREISTADRNIKEDRPVGSGKQDSSLIAEPPVSYQEENYETRGHKLNRDATSLEGQ 570

Query: 887  RAARTRSLVTNWEKKDRSPGHEGFASSNISGAVSSMNTLPVNV------------EMEPG 744
            +A R RSLV NWEK+ RSP +EG  S +     SS+N L  N+            EM   
Sbjct: 571  KAGRMRSLVINWEKRGRSPNYEGPISGSSPETASSVNMLSFNMLKQRGCSPTTEKEMVSA 630

Query: 743  NEEDTISALTEQHNQFVGSLQSRLAKLEMIHKYWERNDIKGAIGMSQKMSDNAVLADIVS 564
            ++ED I+ + EQH+QFV S+QSR  KL+ +H++WERND+KGAI   +KM+D+ VLAD++S
Sbjct: 631  SDEDAIADVMEQHDQFVSSMQSRFGKLQAVHRFWERNDVKGAISAMEKMADHGVLADVIS 690

Query: 563  ILREKPDIVTLDICTCVLPLLTSLLESEMDQHRGVSLEMLLKLVKVFGXXXXXXXXXXXS 384
            ++ EK DIVTLD+CTC+LPLL  LLES+MD+H  +SL++LLKLV+ FG            
Sbjct: 691  VINEKIDIVTLDVCTCLLPLLAGLLESDMDRHLSISLDVLLKLVRTFGSMIYSTVSASTP 750

Query: 383  VGVDIEAEQRLERCNLCYVELEKVKRCLPVLTRRGGTTAKSAHVLSLALQEVS 225
            VGVDIEAEQRLERCNLC+VELEKVKRCLP L RRGG+ AK    L+LALQ+ S
Sbjct: 751  VGVDIEAEQRLERCNLCFVELEKVKRCLPTLMRRGGSVAKITQELNLALQDDS 803


>ref|XP_002316424.1| predicted protein [Populus trichocarpa] gi|222865464|gb|EEF02595.1|
            predicted protein [Populus trichocarpa]
          Length = 728

 Score =  284 bits (727), Expect = 3e-74
 Identities = 145/250 (58%), Positives = 186/250 (74%), Gaps = 12/250 (4%)
 Frame = -1

Query: 938  ETRAHKVDRDACAMESQRAARTRSLVTNWEKKDRSPGHEGFASSNISGAVSSMNTLPVNV 759
            ETR HK++RDA ++ESQ+  R RSL+ NWEK+  SP +EG  S   +G  S +N LP+++
Sbjct: 479  ETRGHKINRDAPSIESQKGGRMRSLMINWEKRGSSPSYEGPTSGISAGTSSVVNVLPLHM 538

Query: 758  ------------EMEPGNEEDTISALTEQHNQFVGSLQSRLAKLEMIHKYWERNDIKGAI 615
                        EM   ++ED I+ L EQH+QFV S+QSR AKL+++H+YWERND+KGAI
Sbjct: 539  FKQRGRAPSIEKEMVSASDEDVIADLMEQHDQFVSSMQSRSAKLQVVHRYWERNDVKGAI 598

Query: 614  GMSQKMSDNAVLADIVSILREKPDIVTLDICTCVLPLLTSLLESEMDQHRGVSLEMLLKL 435
            G   KM+D+AVLAD++SI+ +K D VTLDICTC+LPLLT+LLES+MD+H  +SL+MLLKL
Sbjct: 599  GAMGKMADHAVLADVISIVADKIDTVTLDICTCLLPLLTNLLESDMDRHSSISLDMLLKL 658

Query: 434  VKVFGXXXXXXXXXXXSVGVDIEAEQRLERCNLCYVELEKVKRCLPVLTRRGGTTAKSAH 255
            V+ FG           SVGVDIEAEQRLERCN+C+VELEKVKRCL  LTR+GG+ AK A 
Sbjct: 659  VRTFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKRCLLTLTRKGGSVAKYAQ 718

Query: 254  VLSLALQEVS 225
             L+LALQEVS
Sbjct: 719  ELNLALQEVS 728


>ref|XP_004147132.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
            [Cucumis sativus] gi|449524677|ref|XP_004169348.1|
            PREDICTED: katanin p80 WD40 repeat-containing subunit B1
            homolog [Cucumis sativus]
          Length = 795

 Score =  248 bits (632), Expect = 3e-63
 Identities = 128/281 (45%), Positives = 190/281 (67%), Gaps = 13/281 (4%)
 Frame = -1

Query: 1034 SAVERNVKDNRSTVPAK--FQMNPVSESYRYESYETRAHKVDRDACAMESQRAARTRSLV 861
            SA ++ VK+ R     K   +    + +Y++E YE+R HK+ RDA   E+ +  R RS V
Sbjct: 515  SAPQKIVKEERYIGSGKNETETKDTTANYKHEGYESRGHKISRDASFPEATKGGRLRSHV 574

Query: 860  TNWEKKDRSPGHEGFASSNISGAVSSMNTLPVN-----------VEMEPGNEEDTISALT 714
             +WEK++R P       +   G  +++  +P+N             + P ++EDTI+ + 
Sbjct: 575  -DWEKRER-PNFSRLTYNASPGRAAALENIPLNNGRGYRPSPEKETVSPASDEDTIANVL 632

Query: 713  EQHNQFVGSLQSRLAKLEMIHKYWERNDIKGAIGMSQKMSDNAVLADIVSILREKPDIVT 534
            +QH+QFV S+QSR AKL+ ++++WER+DIKGA+   +KM+D+AV AD++SI+  + ++VT
Sbjct: 633  QQHDQFVNSMQSRSAKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVT 692

Query: 533  LDICTCVLPLLTSLLESEMDQHRGVSLEMLLKLVKVFGXXXXXXXXXXXSVGVDIEAEQR 354
            LDICTC+LP+L+ LLES++D++  +S+EML+KLV+ FG           SVGV+IEAEQR
Sbjct: 693  LDICTCILPVLSGLLESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQR 752

Query: 353  LERCNLCYVELEKVKRCLPVLTRRGGTTAKSAHVLSLALQE 231
            LERCNLC++ELEKVKRCLP L R+ G+ AKSA  L+LALQE
Sbjct: 753  LERCNLCFIELEKVKRCLPALIRKRGSVAKSAQELNLALQE 793