BLASTX nr result

ID: Cnidium21_contig00022523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022523
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...   255   7e-66
ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...   255   9e-66
gb|AFK34889.1| unknown [Medicago truncatula]                          253   3e-65
ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|2...   246   3e-63
ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot...   246   5e-63

>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score =  255 bits (652), Expect = 7e-66
 Identities = 123/186 (66%), Positives = 149/186 (80%), Gaps = 1/186 (0%)
 Frame = -2

Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526
           M NY+D+DDIL E+E+V   F++A +GVG+ D + ET+ +E GSKVELPFWLA EL LRQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346
           AV+VNVPPCFN++TR EI AD A VDLRSRCPYFYE G KIAP+VGD+TIG +LL AF+ 
Sbjct: 61  AVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120

Query: 345 RYKEVLIKAHT-AFAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169
           RYKEVL KAHT A A    F ++LT EE+ LY+ AQS+  +FKKWRMGGPRF+ AS+LGR
Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180

Query: 168 KRKPIE 151
           KRKP E
Sbjct: 181 KRKPTE 186


>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  255 bits (651), Expect = 9e-66
 Identities = 126/186 (67%), Positives = 152/186 (81%), Gaps = 1/186 (0%)
 Frame = -2

Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526
           M +Y++ID+I+ E+ELV A F++A NGVG+ D + ETN VE GSKVELPFWLA EL  RQ
Sbjct: 1   MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQ 60

Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346
           AVT++VP CFN++TR+EI ADA  VDLRSRCPYFYELG K+APLVGD+TIG +LL AF +
Sbjct: 61  AVTIHVPACFNQKTRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAFLS 120

Query: 345 RYKEVLIKAHTAFAV-APTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169
           RYKEVL KAHTA +   P  L+LLT+EE  LY+ AQSS  AFKKWRMGGPRF++ASVLGR
Sbjct: 121 RYKEVLSKAHTAASTPVPKVLTLLTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVLGR 180

Query: 168 KRKPIE 151
           KRKP +
Sbjct: 181 KRKPTD 186


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score =  253 bits (647), Expect = 3e-65
 Identities = 122/186 (65%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
 Frame = -2

Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526
           M NY+D+DDIL E+E+V   F++A +GVG+ D + ET+ +E GSKVELPFWLA EL LRQ
Sbjct: 1   MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60

Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346
           AV+VNVPPCFN++ R EI AD A VDLRSRCPYFYE G KIAP+VGD+TIG +LL AF+ 
Sbjct: 61  AVSVNVPPCFNQKARLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120

Query: 345 RYKEVLIKAHT-AFAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169
           RYKEVL KAHT A A    F ++LT EE+ LY+ AQS+  +FKKWRMGGPRF+ AS+LGR
Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180

Query: 168 KRKPIE 151
           KRKP E
Sbjct: 181 KRKPTE 186


>ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|222865254|gb|EEF02385.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  246 bits (629), Expect = 3e-63
 Identities = 128/186 (68%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
 Frame = -2

Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526
           M NY +IDDILAE+E VP  F++A NGV + +ST E   VE GSK ELPFWLARELH+RQ
Sbjct: 1   MANYNEIDDILAEEEFVPVVFQKAINGVKIDEST-EKGHVEQGSKTELPFWLARELHMRQ 59

Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346
           AV+++VP CFN++TR EI ADAA VDLRSRCPYFYE G K+APL  DKTIGL+L  AFR 
Sbjct: 60  AVSISVPACFNQKTRLEIQADAACVDLRSRCPYFYEFGCKLAPLC-DKTIGLLLPYAFRI 118

Query: 345 RYKEVLIKAH-TAFAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169
           RYKE+L KAH TAFA A  FL+ LT EE  LY+AAQSS  AFKKWRMGGPR ++AS+LGR
Sbjct: 119 RYKEILHKAHTTAFATASKFLTHLTREETSLYEAAQSSMAAFKKWRMGGPRLQRASILGR 178

Query: 168 KRKPIE 151
           KRKP E
Sbjct: 179 KRKPAE 184


>ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis
           sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA
           replication complex GINS protein PSF3-like [Cucumis
           sativus]
          Length = 189

 Score =  246 bits (627), Expect = 5e-63
 Identities = 124/188 (65%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
 Frame = -2

Query: 711 SRMTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHL 532
           S MT+Y+DIDDILAE+ELV   F++A NGVG+ D + ET+ VE GSKVELPFWLA+ELHL
Sbjct: 3   SEMTSYYDIDDILAEEELVSVVFQKAVNGVGI-DPSSETDSVESGSKVELPFWLAQELHL 61

Query: 531 RQAVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAF 352
           RQ   + +P CFN+RTR EI ADAA VDLRSRC +FYE G KIAPLVGD+TIG  LL   
Sbjct: 62  RQVAVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTL 121

Query: 351 RTRYKEVLIKAHTA-FAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVL 175
           ++RYKEVL KAH+A FA +  +L+LL++EE K+Y+AAQSS  AFKKWRMGGPRF++AS L
Sbjct: 122 KSRYKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFL 181

Query: 174 GRKRKPIE 151
            RKRK  E
Sbjct: 182 SRKRKSTE 189


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