BLASTX nr result
ID: Cnidium21_contig00022523
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00022523 (781 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M... 255 7e-66 ref|XP_002271201.1| PREDICTED: probable DNA replication complex ... 255 9e-66 gb|AFK34889.1| unknown [Medicago truncatula] 253 3e-65 ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|2... 246 3e-63 ref|XP_004138422.1| PREDICTED: DNA replication complex GINS prot... 246 5e-63 >ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula] gi|355489935|gb|AES71138.1| DNA replication complex GINS protein PSF3 [Medicago truncatula] Length = 186 Score = 255 bits (652), Expect = 7e-66 Identities = 123/186 (66%), Positives = 149/186 (80%), Gaps = 1/186 (0%) Frame = -2 Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526 M NY+D+DDIL E+E+V F++A +GVG+ D + ET+ +E GSKVELPFWLA EL LRQ Sbjct: 1 MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60 Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346 AV+VNVPPCFN++TR EI AD A VDLRSRCPYFYE G KIAP+VGD+TIG +LL AF+ Sbjct: 61 AVSVNVPPCFNQKTRLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120 Query: 345 RYKEVLIKAHT-AFAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169 RYKEVL KAHT A A F ++LT EE+ LY+ AQS+ +FKKWRMGGPRF+ AS+LGR Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180 Query: 168 KRKPIE 151 KRKP E Sbjct: 181 KRKPTE 186 >ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3 [Vitis vinifera] gi|147828134|emb|CAN64086.1| hypothetical protein VITISV_006937 [Vitis vinifera] gi|297736610|emb|CBI25481.3| unnamed protein product [Vitis vinifera] Length = 186 Score = 255 bits (651), Expect = 9e-66 Identities = 126/186 (67%), Positives = 152/186 (81%), Gaps = 1/186 (0%) Frame = -2 Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526 M +Y++ID+I+ E+ELV A F++A NGVG+ D + ETN VE GSKVELPFWLA EL RQ Sbjct: 1 MAHYYNIDEIIVEEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQ 60 Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346 AVT++VP CFN++TR+EI ADA VDLRSRCPYFYELG K+APLVGD+TIG +LL AF + Sbjct: 61 AVTIHVPACFNQKTRKEIQADAPCVDLRSRCPYFYELGCKVAPLVGDRTIGSLLLQAFLS 120 Query: 345 RYKEVLIKAHTAFAV-APTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169 RYKEVL KAHTA + P L+LLT+EE LY+ AQSS AFKKWRMGGPRF++ASVLGR Sbjct: 121 RYKEVLSKAHTAASTPVPKVLTLLTKEETNLYETAQSSMAAFKKWRMGGPRFQRASVLGR 180 Query: 168 KRKPIE 151 KRKP + Sbjct: 181 KRKPTD 186 >gb|AFK34889.1| unknown [Medicago truncatula] Length = 186 Score = 253 bits (647), Expect = 3e-65 Identities = 122/186 (65%), Positives = 148/186 (79%), Gaps = 1/186 (0%) Frame = -2 Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526 M NY+D+DDIL E+E+V F++A +GVG+ D + ET+ +E GSKVELPFWLA EL LRQ Sbjct: 1 MANYYDMDDILVEEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQ 60 Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346 AV+VNVPPCFN++ R EI AD A VDLRSRCPYFYE G KIAP+VGD+TIG +LL AF+ Sbjct: 61 AVSVNVPPCFNQKARLEIQADCACVDLRSRCPYFYEFGCKIAPIVGDRTIGFLLLSAFKN 120 Query: 345 RYKEVLIKAHT-AFAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169 RYKEVL KAHT A A F ++LT EE+ LY+ AQS+ +FKKWRMGGPRF+ AS+LGR Sbjct: 121 RYKEVLTKAHTAAIAAGSKFWTILTNEEINLYETAQSAMASFKKWRMGGPRFQIASILGR 180 Query: 168 KRKPIE 151 KRKP E Sbjct: 181 KRKPTE 186 >ref|XP_002316214.1| predicted protein [Populus trichocarpa] gi|222865254|gb|EEF02385.1| predicted protein [Populus trichocarpa] Length = 184 Score = 246 bits (629), Expect = 3e-63 Identities = 128/186 (68%), Positives = 148/186 (79%), Gaps = 1/186 (0%) Frame = -2 Query: 705 MTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHLRQ 526 M NY +IDDILAE+E VP F++A NGV + +ST E VE GSK ELPFWLARELH+RQ Sbjct: 1 MANYNEIDDILAEEEFVPVVFQKAINGVKIDEST-EKGHVEQGSKTELPFWLARELHMRQ 59 Query: 525 AVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAFRT 346 AV+++VP CFN++TR EI ADAA VDLRSRCPYFYE G K+APL DKTIGL+L AFR Sbjct: 60 AVSISVPACFNQKTRLEIQADAACVDLRSRCPYFYEFGCKLAPLC-DKTIGLLLPYAFRI 118 Query: 345 RYKEVLIKAH-TAFAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVLGR 169 RYKE+L KAH TAFA A FL+ LT EE LY+AAQSS AFKKWRMGGPR ++AS+LGR Sbjct: 119 RYKEILHKAHTTAFATASKFLTHLTREETSLYEAAQSSMAAFKKWRMGGPRLQRASILGR 178 Query: 168 KRKPIE 151 KRKP E Sbjct: 179 KRKPAE 184 >ref|XP_004138422.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis sativus] gi|449519657|ref|XP_004166851.1| PREDICTED: DNA replication complex GINS protein PSF3-like [Cucumis sativus] Length = 189 Score = 246 bits (627), Expect = 5e-63 Identities = 124/188 (65%), Positives = 150/188 (79%), Gaps = 1/188 (0%) Frame = -2 Query: 711 SRMTNYFDIDDILAEDELVPATFREATNGVGLFDSTDETNKVEPGSKVELPFWLARELHL 532 S MT+Y+DIDDILAE+ELV F++A NGVG+ D + ET+ VE GSKVELPFWLA+ELHL Sbjct: 3 SEMTSYYDIDDILAEEELVSVVFQKAVNGVGI-DPSSETDSVESGSKVELPFWLAQELHL 61 Query: 531 RQAVTVNVPPCFNKRTREEIDADAAHVDLRSRCPYFYELGYKIAPLVGDKTIGLVLLIAF 352 RQ + +P CFN+RTR EI ADAA VDLRSRC +FYE G KIAPLVGD+TIG LL Sbjct: 62 RQVAVMALPSCFNQRTRLEIQADAAFVDLRSRCQFFYEFGCKIAPLVGDRTIGSWLLSTL 121 Query: 351 RTRYKEVLIKAHTA-FAVAPTFLSLLTEEEVKLYKAAQSSAVAFKKWRMGGPRFEKASVL 175 ++RYKEVL KAH+A FA + +L+LL++EE K+Y+AAQSS AFKKWRMGGPRF++AS L Sbjct: 122 KSRYKEVLTKAHSAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQRASFL 181 Query: 174 GRKRKPIE 151 RKRK E Sbjct: 182 SRKRKSTE 189