BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022463
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   467   e-129
emb|CBI29839.3| unnamed protein product [Vitis vinifera]              458   e-126
ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...   452   e-125
ref|XP_002308947.1| predicted protein [Populus trichocarpa] gi|2...   452   e-125

>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  467 bits (1202), Expect = e-129
 Identities = 245/303 (80%), Positives = 273/303 (90%), Gaps = 5/303 (1%)
 Frame = +3

Query: 93  MSAVNDSGDMSSEMELDAFRRLFPLRFYERHLLESIRPDARPLGKARETTLALGAVASAD 272
           M + N SGD+SSEME+DAFRRLFPLR++ER LL+SIRPDARPLG+AR+T+LALGAVASAD
Sbjct: 1   MVSANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASAD 60

Query: 273 GSALAKIGCTTMLAAVKMEVMTPTTESPDEGCIAIDFHMPPI----VRPGRPADVAPVVS 440
           GSALAKIGCTTMLAAVKMEVMTP  ESPDEG IAI+F+MPPI    VRPGRPA+ APVVS
Sbjct: 61  GSALAKIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVS 120

Query: 441 KQLSDTILSSGMINLKDLCLVSGKAAWMAYLDVYCLDADGALFDTALLSAVAAFSHLKIP 620
           KQLSDTILSSGMINLK+L LVSGKAAWMAYLD+YCLDADG+LFD ALL+AVAAFSHL+IP
Sbjct: 121 KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVAAFSHLRIP 180

Query: 621 VVSLNDDGR-VVVSEAIEGQNLENEPVNKDKRKLKLSTIPFSLTCILHKNFILADPTAEE 797
           VVSLN++GR VVVSE  E    E EPVNK KRKL LS++PFSLTCILHKN+ILADPTAEE
Sbjct: 181 VVSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYILADPTAEE 240

Query: 798 ESIMDTLLTVVLDSSCKLVSLYKPGGTFVAYNAAVQDCIALTRQRVKELQRILTEAISDM 977
           ESIM+TL+TVVLDSS +LVSLYKPGG  +AY +AVQDCIALTRQRVKEL+ IL EAISDM
Sbjct: 241 ESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSILNEAISDM 300

Query: 978 EVD 986
           EVD
Sbjct: 301 EVD 303


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  458 bits (1178), Expect = e-126
 Identities = 244/311 (78%), Positives = 272/311 (87%), Gaps = 13/311 (4%)
 Frame = +3

Query: 93  MSAVNDSGDMSSEMELDAFRRLFPLRFYERHLLESIRPDARPLGKARETTLALGAVASAD 272
           M + N SGD+SSEME+DAFRRLFPLR++ER LL+SIRPDARPLG+AR+T+LALGAVASAD
Sbjct: 1   MVSANVSGDLSSEMEVDAFRRLFPLRYHERFLLDSIRPDARPLGRARDTSLALGAVASAD 60

Query: 273 GSALAKIGCTTMLAAVKMEVMTPTTESPDEGCIAIDFHMPPI----VRPGRPADVAPVVS 440
           GSALAKIGCTTMLAAVKMEVMTP  ESPDEG IAI+F+MPPI    VRPGRPA+ APVVS
Sbjct: 61  GSALAKIGCTTMLAAVKMEVMTPPKESPDEGSIAIEFYMPPICSPLVRPGRPAEEAPVVS 120

Query: 441 KQLSDTILS--------SGMINLKDLCLVSGKAAWMAYLDVYCLDADGALFDTALLSAVA 596
           KQLSDTIL         SGMINLK+L LVSGKAAWMAYLD+YCLDADG+LFD ALL+AVA
Sbjct: 121 KQLSDTILRHVNVVTSFSGMINLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALLAAVA 180

Query: 597 AFSHLKIPVVSLNDDGR-VVVSEAIEGQNLENEPVNKDKRKLKLSTIPFSLTCILHKNFI 773
           AFSHL+IPVVSLN++GR VVVSE  E    E EPVNK KRKL LS++PFSLTCILHKN+I
Sbjct: 181 AFSHLRIPVVSLNEEGRVVVVSEENEEGKSEKEPVNKGKRKLTLSSLPFSLTCILHKNYI 240

Query: 774 LADPTAEEESIMDTLLTVVLDSSCKLVSLYKPGGTFVAYNAAVQDCIALTRQRVKELQRI 953
           LADPTAEEESIM+TL+TVVLDSS +LVSLYKPGG  +AY +AVQDCIALTRQRVKEL+ I
Sbjct: 241 LADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSI 300

Query: 954 LTEAISDMEVD 986
           L EAISDMEVD
Sbjct: 301 LNEAISDMEVD 311


>ref|XP_002322717.1| predicted protein [Populus trichocarpa] gi|222867347|gb|EEF04478.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  457 bits (1175), Expect = e-126
 Identities = 240/318 (75%), Positives = 267/318 (83%), Gaps = 25/318 (7%)
 Frame = +3

Query: 93  MSAVNDSGDMSSEMELDAFRRLFPLRFYERHLLESIRPDARPLGKARETTLALGAVASAD 272
           M   + SGD+SSEME+DAFR LFPLR++ERHL ESIRPDARPLG+AR+TTLALGAVASA 
Sbjct: 1   MGVPDASGDLSSEMEVDAFRHLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAH 60

Query: 273 GSALAKIGCTTMLAAVKMEVMTPTTESPDEGCIAIDFHMP----PIVRPGRPADVAPVVS 440
           GSALAKIG TTMLAA+KMEVMTP+TESPDEGCIAIDFHMP    PIVRPGRPA+ APV+S
Sbjct: 61  GSALAKIGSTTMLAAIKMEVMTPSTESPDEGCIAIDFHMPPICSPIVRPGRPAEAAPVIS 120

Query: 441 KQLSDTILS--------------------SGMINLKDLCLVSGKAAWMAYLDVYCLDADG 560
           KQLSDTI                      SGMINLK+L LVSGKAAWMAYLD+YCLDADG
Sbjct: 121 KQLSDTISRQVKFSASIDSPQRLILHAEISGMINLKELSLVSGKAAWMAYLDIYCLDADG 180

Query: 561 ALFDTALLSAVAAFSHLKIPVVSLNDDGRVV-VSEAIEGQNLENEPVNKDKRKLKLSTIP 737
           ALFD ALLSAVAAFSHL+IP+VSLNDDG++V VSE  EG  LE EPVNK+KRKL LS+IP
Sbjct: 181 ALFDAALLSAVAAFSHLQIPIVSLNDDGKIVLVSEEDEGAKLEKEPVNKEKRKLTLSSIP 240

Query: 738 FSLTCILHKNFILADPTAEEESIMDTLLTVVLDSSCKLVSLYKPGGTFVAYNAAVQDCIA 917
           FSLTCILHKN+ILADPTAEEESIM+TL+TVVLDSS +LVS YKPGG+  AY +AV+DC+A
Sbjct: 241 FSLTCILHKNYILADPTAEEESIMETLVTVVLDSSARLVSFYKPGGSVFAYTSAVKDCVA 300

Query: 918 LTRQRVKELQRILTEAIS 971
           LTRQRVKELQ IL EAIS
Sbjct: 301 LTRQRVKELQEILDEAIS 318


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score =  452 bits (1162), Expect = e-125
 Identities = 229/303 (75%), Positives = 265/303 (87%), Gaps = 5/303 (1%)
 Frame = +3

Query: 93  MSAVNDSGDMSSEMELDAFRRLFPLRFYERHLLESIRPDARPLGKARETTLALGAVASAD 272
           M   N SGD+S+EME DAFRRLFPL F+ERHL ESIRPD R LG+AR+TTLALGAV SAD
Sbjct: 1   MGLPNVSGDLSTEMEADAFRRLFPLLFHERHLAESIRPDGRSLGRARDTTLALGAVVSAD 60

Query: 273 GSALAKIGCTTMLAAVKMEVMTPTTESPDEGCIAIDFHMPPI----VRPGRPADVAPVVS 440
           GSA+AKIG TTM+AA+KMEVMTP++ESPDEGCIAIDFHMPPI    VRPGRPA+ APVVS
Sbjct: 61  GSAIAKIGSTTMMAAIKMEVMTPSSESPDEGCIAIDFHMPPICSPLVRPGRPAEAAPVVS 120

Query: 441 KQLSDTILSSGMINLKDLCLVSGKAAWMAYLDVYCLDADGALFDTALLSAVAAFSHLKIP 620
           KQLSDTI+SS MI+LK+L LVSGKAAWMAYLD+YCLDADG+LFD AL SAVAAF++L+IP
Sbjct: 121 KQLSDTIMSSAMIDLKELSLVSGKAAWMAYLDIYCLDADGSLFDAALFSAVAAFTNLQIP 180

Query: 621 VVSLNDDGR-VVVSEAIEGQNLENEPVNKDKRKLKLSTIPFSLTCILHKNFILADPTAEE 797
           +VSLNDDG+ VVVS+  EG   E E VNK+KRKL L ++PFSLTC+LHKN+ILADPTAEE
Sbjct: 181 IVSLNDDGKVVVVSDENEGGKREKEAVNKEKRKLTLRSLPFSLTCVLHKNYILADPTAEE 240

Query: 798 ESIMDTLLTVVLDSSCKLVSLYKPGGTFVAYNAAVQDCIALTRQRVKELQRILTEAISDM 977
           ESIM+TL+TVVLDSS +LVS YKPGG  +AY +AVQDC+ALTRQRVKELQ IL EA+S M
Sbjct: 241 ESIMETLVTVVLDSSARLVSFYKPGGPVLAYTSAVQDCVALTRQRVKELQNILDEALSGM 300

Query: 978 EVD 986
           ++D
Sbjct: 301 QID 303


>ref|XP_002308947.1| predicted protein [Populus trichocarpa] gi|222854923|gb|EEE92470.1|
           predicted protein [Populus trichocarpa]
          Length = 318

 Score =  452 bits (1162), Expect = e-125
 Identities = 238/318 (74%), Positives = 270/318 (84%), Gaps = 20/318 (6%)
 Frame = +3

Query: 93  MSAVNDSGDMSSEMELDAFRRLFPLRFYERHLLESIRPDARPLGKARETTLALGAVASAD 272
           M   + SGD+SSEME+DAFRRLFPLR++ERHL ESIRPDARPLG+AR+TTLALGAVASA 
Sbjct: 1   MGVPDASGDLSSEMEVDAFRRLFPLRYFERHLSESIRPDARPLGRARDTTLALGAVASAH 60

Query: 273 GSALAKIGCTTMLAAVKMEVMTPTTESPDEGCIAIDFHMP----PIVRPGRPADVAPVVS 440
           GSALAKIG TTMLAA+KMEVMTP+TESP+EG IAIDFHMP    PIVRPGRPA+ APV+S
Sbjct: 61  GSALAKIGSTTMLAAIKMEVMTPSTESPEEGSIAIDFHMPPICSPIVRPGRPAEAAPVIS 120

Query: 441 KQLSDTI---LSSGMINLKDLCLVSGKAAWMAYLDVYCLDADGALFDTALLSAVAAFSH- 608
           KQLSDTI   ++SGMINLK+L LVSGKAAWMAYLD+YCLDADGALFD ALLSAV AFSH 
Sbjct: 121 KQLSDTISRQVNSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVGAFSHS 180

Query: 609 -----------LKIPVVSLNDDGRVV-VSEAIEGQNLENEPVNKDKRKLKLSTIPFSLTC 752
                      ++IP+VSLNDDG++V VSE  +G  LE EPVNK+KRKL LS+IPFSLTC
Sbjct: 181 AFIYYRSLICAVQIPIVSLNDDGKIVLVSEEDDGTKLEEEPVNKEKRKLTLSSIPFSLTC 240

Query: 753 ILHKNFILADPTAEEESIMDTLLTVVLDSSCKLVSLYKPGGTFVAYNAAVQDCIALTRQR 932
           ILHKN+ILADPTAEEESIM+TL+TVVLDSS +LVS YKPGG  +A  +AVQDC+ALTRQR
Sbjct: 241 ILHKNYILADPTAEEESIMETLVTVVLDSSSRLVSFYKPGGPVLAQTSAVQDCVALTRQR 300

Query: 933 VKELQRILTEAISDMEVD 986
           VKELQ IL E IS ME+D
Sbjct: 301 VKELQDILDETISGMEID 318