BLASTX nr result

ID: Cnidium21_contig00022370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022370
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|3555...    59   7e-07
emb|CBH32588.1| DNA polymerase alpha catalytic subunit,putative,...    58   2e-06
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...    57   3e-06
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...    57   3e-06
emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,...    57   4e-06

>ref|XP_003611716.1| DNA polymerase [Medicago truncatula] gi|355513051|gb|AES94674.1|
           DNA polymerase [Medicago truncatula]
          Length = 611

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 29/33 (87%), Positives = 31/33 (93%)
 Frame = -1

Query: 336 QVIYGDTDSIMIYSGLDDVAKAKSISVKVIQEV 238
           +VIYGDTDSIMIYSGLDD+AKA SIS KVIQEV
Sbjct: 129 EVIYGDTDSIMIYSGLDDIAKATSISKKVIQEV 161


>emb|CBH32588.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
            aestivum]
          Length = 1369

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -1

Query: 336  QVIYGDTDSIMIYSGLDDVAKAKSISVKVIQEV 238
            +VIYGDTDSIMIY+GLDD++KAKSI+ KVIQEV
Sbjct: 908  EVIYGDTDSIMIYTGLDDISKAKSIAGKVIQEV 940


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 26/33 (78%), Positives = 31/33 (93%)
 Frame = -1

Query: 336  QVIYGDTDSIMIYSGLDDVAKAKSISVKVIQEV 238
            +VIYGDTDSIMIYSGLDD+ K+K+I+ KVIQEV
Sbjct: 1078 EVIYGDTDSIMIYSGLDDIGKSKAIAAKVIQEV 1110


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/33 (81%), Positives = 31/33 (93%)
 Frame = -1

Query: 336 QVIYGDTDSIMIYSGLDDVAKAKSISVKVIQEV 238
           +VIYGDTDSIMIYSGLDD+ KAK+I+ KVIQEV
Sbjct: 827 EVIYGDTDSIMIYSGLDDIPKAKAIAGKVIQEV 859


>emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
            aestivum]
          Length = 1516

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 26/33 (78%), Positives = 32/33 (96%)
 Frame = -1

Query: 336  QVIYGDTDSIMIYSGLDDVAKAKSISVKVIQEV 238
            +VIYGDTDSIMIY+GLDD++KAK+I+ KVIQEV
Sbjct: 1037 EVIYGDTDSIMIYTGLDDISKAKAIAGKVIQEV 1069


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