BLASTX nr result
ID: Cnidium21_contig00022350
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00022350 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003568924.1| PREDICTED: probable chromatin-remodeling com... 77 2e-12 ref|XP_003593979.1| Chromatin remodeling complex subunit [Medica... 75 4e-12 ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group] g... 74 1e-11 gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associ... 74 1e-11 gb|AFW80812.1| putative chromatin-remodeling factor family [Zea ... 74 1e-11 >ref|XP_003568924.1| PREDICTED: probable chromatin-remodeling complex ATPase chain-like [Brachypodium distachyon] Length = 1101 Score = 76.6 bits (187), Expect = 2e-12 Identities = 39/52 (75%), Positives = 39/52 (75%) Frame = +1 Query: 325 QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480 QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAK RHASKVT Sbjct: 144 QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKGSQSAEKKTRGRGRHASKVT 195 >ref|XP_003593979.1| Chromatin remodeling complex subunit [Medicago truncatula] gi|355483027|gb|AES64230.1| Chromatin remodeling complex subunit [Medicago truncatula] Length = 1066 Score = 75.5 bits (184), Expect = 4e-12 Identities = 37/54 (68%), Positives = 41/54 (75%) Frame = +1 Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480 +AQNAAI+ADMN +GKGRLKYLLQQTE+FAHFAK D RHASKVT Sbjct: 106 DAQNAAIEADMNNRGKGRLKYLLQQTELFAHFAKGDQSSQKKSKGSGRHASKVT 159 >ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group] gi|57012942|sp|Q7G8Y3.2|ISW2_ORYSJ RecName: Full=Probable chromatin-remodeling complex ATPase chain; AltName: Full=ISW2-like; AltName: Full=Sucrose nonfermenting protein 2 homolog gi|54290802|dbj|BAD61441.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|57900237|dbj|BAD88342.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|58737200|dbj|BAD89475.1| putative DNA-dependent ATPase SNF2H [Oryza sativa Japonica Group] gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa Japonica Group] gi|215740512|dbj|BAG97168.1| unnamed protein product [Oryza sativa Japonica Group] gi|222618445|gb|EEE54577.1| hypothetical protein OsJ_01780 [Oryza sativa Japonica Group] Length = 1107 Score = 73.9 bits (180), Expect = 1e-11 Identities = 36/54 (66%), Positives = 40/54 (74%) Frame = +1 Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480 + QNAA+DADMN KGKGRLKYLLQQTEIFAHFAK + RHASK+T Sbjct: 143 DTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQSKEKKPRGRGRHASKMT 196 >gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associated, actin dependent regulator of chromatin [Oryza sativa] gi|15528681|dbj|BAB64747.1| putative DNA-dependent ATPase [Oryza sativa Japonica Group] Length = 1122 Score = 73.9 bits (180), Expect = 1e-11 Identities = 36/54 (66%), Positives = 40/54 (74%) Frame = +1 Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480 + QNAA+DADMN KGKGRLKYLLQQTEIFAHFAK + RHASK+T Sbjct: 143 DTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQSKEKKPRGRGRHASKMT 196 >gb|AFW80812.1| putative chromatin-remodeling factor family [Zea mays] Length = 1113 Score = 73.9 bits (180), Expect = 1e-11 Identities = 37/54 (68%), Positives = 39/54 (72%) Frame = +1 Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480 + QNAAIDADMN KGKGRLKYLLQQTEIFAHFAK RHASK+T Sbjct: 138 DTQNAAIDADMNNKGKGRLKYLLQQTEIFAHFAKGSQSNEKKPRGRGRHASKMT 191