BLASTX nr result

ID: Cnidium21_contig00022350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022350
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568924.1| PREDICTED: probable chromatin-remodeling com...    77   2e-12
ref|XP_003593979.1| Chromatin remodeling complex subunit [Medica...    75   4e-12
ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group] g...    74   1e-11
gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associ...    74   1e-11
gb|AFW80812.1| putative chromatin-remodeling factor family [Zea ...    74   1e-11

>ref|XP_003568924.1| PREDICTED: probable chromatin-remodeling complex ATPase chain-like
           [Brachypodium distachyon]
          Length = 1101

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/52 (75%), Positives = 39/52 (75%)
 Frame = +1

Query: 325 QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480
           QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAK             RHASKVT
Sbjct: 144 QNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKGSQSAEKKTRGRGRHASKVT 195


>ref|XP_003593979.1| Chromatin remodeling complex subunit [Medicago truncatula]
           gi|355483027|gb|AES64230.1| Chromatin remodeling complex
           subunit [Medicago truncatula]
          Length = 1066

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/54 (68%), Positives = 41/54 (75%)
 Frame = +1

Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480
           +AQNAAI+ADMN +GKGRLKYLLQQTE+FAHFAK D           RHASKVT
Sbjct: 106 DAQNAAIEADMNNRGKGRLKYLLQQTELFAHFAKGDQSSQKKSKGSGRHASKVT 159


>ref|NP_001043044.1| Os01g0367900 [Oryza sativa Japonica Group]
           gi|57012942|sp|Q7G8Y3.2|ISW2_ORYSJ RecName:
           Full=Probable chromatin-remodeling complex ATPase chain;
           AltName: Full=ISW2-like; AltName: Full=Sucrose
           nonfermenting protein 2 homolog
           gi|54290802|dbj|BAD61441.1| putative DNA-dependent
           ATPase SNF2H [Oryza sativa Japonica Group]
           gi|57900237|dbj|BAD88342.1| putative DNA-dependent
           ATPase SNF2H [Oryza sativa Japonica Group]
           gi|58737200|dbj|BAD89475.1| putative DNA-dependent
           ATPase SNF2H [Oryza sativa Japonica Group]
           gi|113532575|dbj|BAF04958.1| Os01g0367900 [Oryza sativa
           Japonica Group] gi|215740512|dbj|BAG97168.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222618445|gb|EEE54577.1| hypothetical protein
           OsJ_01780 [Oryza sativa Japonica Group]
          Length = 1107

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/54 (66%), Positives = 40/54 (74%)
 Frame = +1

Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480
           + QNAA+DADMN KGKGRLKYLLQQTEIFAHFAK +           RHASK+T
Sbjct: 143 DTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQSKEKKPRGRGRHASKMT 196


>gb|AAK53826.1|AC011806_3 Putative SWI/SNF related, matrix associated, actin dependent
           regulator of chromatin [Oryza sativa]
           gi|15528681|dbj|BAB64747.1| putative DNA-dependent
           ATPase [Oryza sativa Japonica Group]
          Length = 1122

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/54 (66%), Positives = 40/54 (74%)
 Frame = +1

Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480
           + QNAA+DADMN KGKGRLKYLLQQTEIFAHFAK +           RHASK+T
Sbjct: 143 DTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQSKEKKPRGRGRHASKMT 196


>gb|AFW80812.1| putative chromatin-remodeling factor family [Zea mays]
          Length = 1113

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/54 (68%), Positives = 39/54 (72%)
 Frame = +1

Query: 319 NAQNAAIDADMNKKGKGRLKYLLQQTEIFAHFAKSDXXXXXXXXXXXRHASKVT 480
           + QNAAIDADMN KGKGRLKYLLQQTEIFAHFAK             RHASK+T
Sbjct: 138 DTQNAAIDADMNNKGKGRLKYLLQQTEIFAHFAKGSQSNEKKPRGRGRHASKMT 191


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