BLASTX nr result

ID: Cnidium21_contig00022348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022348
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35964.3| unnamed protein product [Vitis vinifera]              288   2e-75
ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]        287   3e-75
ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, ...   281   2e-73
ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding prote...   276   6e-72
ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group] g...   265   1e-68

>emb|CBI35964.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  288 bits (738), Expect = 2e-75
 Identities = 138/179 (77%), Positives = 164/179 (91%)
 Frame = -2

Query: 924 DSSAGKLFVGGIAWETSEESFSNYFSNYGEITDSVIMMDKLTGRPRGFGFVTFADAEVAD 745
           +S +GKLFVGGI+WETSEE F+NYFSNYGEITDSVIMMD+ TGRPRGFGF+TFAD  VAD
Sbjct: 47  NSYSGKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVAD 106

Query: 744 KVLDKEHVIDGRAVEVKRTVPREDIQVKGVLKTRKIFVGGLPLSLTEDELKEYFSAYGIV 565
           KVL+++HVIDGRAVEVK+TVPRE ++V+GV KTRKIFVGG+P SLTEDELK+YFS+YG +
Sbjct: 107 KVLEEDHVIDGRAVEVKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSYGAI 166

Query: 564 VEHQIMLDHTTGRSRGFGFVTFDNENSVEKIFSDGQIHELGGKQVEIKKAEPKRAIGDY 388
           VE+QIMLDH TGRSRGFGFVTF +E++VE++FS+G+ HELGGK VEIKKAEPKRA  +Y
Sbjct: 167 VENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKRAGAEY 225


>ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
          Length = 501

 Score =  287 bits (735), Expect = 3e-75
 Identities = 138/182 (75%), Positives = 162/182 (89%)
 Frame = -2

Query: 933 GHVDSSAGKLFVGGIAWETSEESFSNYFSNYGEITDSVIMMDKLTGRPRGFGFVTFADAE 754
           G  D    KLFVGGI+WETSEE F+NYFSNYGEITDSVIMMD+ TGRPRGFGF+TFAD  
Sbjct: 192 GESDEDKEKLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPA 251

Query: 753 VADKVLDKEHVIDGRAVEVKRTVPREDIQVKGVLKTRKIFVGGLPLSLTEDELKEYFSAY 574
           VADKVL+++HVIDGRAVEVK+TVPRE ++V+GV KTRKIFVGG+P SLTEDELK+YFS+Y
Sbjct: 252 VADKVLEEDHVIDGRAVEVKKTVPREGMEVRGVSKTRKIFVGGIPSSLTEDELKDYFSSY 311

Query: 573 GIVVEHQIMLDHTTGRSRGFGFVTFDNENSVEKIFSDGQIHELGGKQVEIKKAEPKRAIG 394
           G +VE+QIMLDH TGRSRGFGFVTF +E++VE++FS+G+ HELGGK VEIKKAEPKRA  
Sbjct: 312 GAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEPKRAGA 371

Query: 393 DY 388
           +Y
Sbjct: 372 EY 373


>ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223539470|gb|EEF41060.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 412

 Score =  281 bits (719), Expect = 2e-73
 Identities = 134/181 (74%), Positives = 161/181 (88%)
 Frame = -2

Query: 924 DSSAGKLFVGGIAWETSEESFSNYFSNYGEITDSVIMMDKLTGRPRGFGFVTFADAEVAD 745
           DSS GKLFVGGI+WET+EE+F++YFS +GEITDSVIM D+ +GRPRGFGFVTFAD   AD
Sbjct: 75  DSSQGKLFVGGISWETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAAD 134

Query: 744 KVLDKEHVIDGRAVEVKRTVPREDIQVKGVLKTRKIFVGGLPLSLTEDELKEYFSAYGIV 565
           +VL+++H+ID RAVEVKRTVPRE+++VKGV++ RKIFVGG+P +LTEDEL EYFS YG +
Sbjct: 135 RVLEEDHIIDDRAVEVKRTVPREEMEVKGVVRARKIFVGGIPPTLTEDELGEYFSVYGNI 194

Query: 564 VEHQIMLDHTTGRSRGFGFVTFDNENSVEKIFSDGQIHELGGKQVEIKKAEPKRAIGDYG 385
           VEHQIMLDH TGRSRGFGFVTF+ E+SVE+IFS G+ HELGGK+VEIKKA PKR  GDYG
Sbjct: 195 VEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGGKRVEIKKAVPKRNGGDYG 254

Query: 384 N 382
           +
Sbjct: 255 S 255


>ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
           [Glycine max]
          Length = 353

 Score =  276 bits (707), Expect = 6e-72
 Identities = 135/183 (73%), Positives = 158/183 (86%)
 Frame = -2

Query: 924 DSSAGKLFVGGIAWETSEESFSNYFSNYGEITDSVIMMDKLTGRPRGFGFVTFADAEVAD 745
           DS +GKLFVGGI+WETS+ESF NYFS YGE+TDSVIM +KL+GRPRGFGFVTFA++ VAD
Sbjct: 36  DSFSGKLFVGGISWETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVAD 95

Query: 744 KVLDKEHVIDGRAVEVKRTVPREDIQVKGVLKTRKIFVGGLPLSLTEDELKEYFSAYGIV 565
           +VL +EH ID R VEVKRTVPRED+ V GV KT+KIFVGG+    T+DEL+EYFS YG V
Sbjct: 96  EVLAQEHTIDHRVVEVKRTVPREDVDVTGVFKTKKIFVGGIAQFFTDDELREYFSPYGNV 155

Query: 564 VEHQIMLDHTTGRSRGFGFVTFDNENSVEKIFSDGQIHELGGKQVEIKKAEPKRAIGDYG 385
           +E QIMLDH TGRSRGFGFVTFD+E+SVEK+FS G+IHE+GGKQVEIK+AEPKR+  DY 
Sbjct: 156 IECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEIKRAEPKRSGVDYC 215

Query: 384 NDS 376
           N S
Sbjct: 216 NTS 218


>ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
           gi|46806500|dbj|BAD17624.1| putative heterogeneous
           nuclearribonucleoprotein A2 [Oryza sativa Japonica
           Group] gi|46806519|dbj|BAD17632.1| putative
           heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
           Japonica Group] gi|113535853|dbj|BAF08236.1|
           Os02g0221500 [Oryza sativa Japonica Group]
          Length = 397

 Score =  265 bits (678), Expect = 1e-68
 Identities = 128/180 (71%), Positives = 154/180 (85%)
 Frame = -2

Query: 918 SAGKLFVGGIAWETSEESFSNYFSNYGEITDSVIMMDKLTGRPRGFGFVTFADAEVADKV 739
           S+GK+FVGG+AWET+EESFS +F  YG ITDSVIM DK T  PRGFGFVTF+D  V DKV
Sbjct: 64  SSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKV 123

Query: 738 LDKEHVIDGRAVEVKRTVPREDIQVKGVLKTRKIFVGGLPLSLTEDELKEYFSAYGIVVE 559
           L+ EHVIDGR VEVKRTVPRE++  K   KTRKIFVGGLP SLTEDEL+E+FS YG +VE
Sbjct: 124 LEDEHVIDGRTVEVKRTVPREEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYGKIVE 183

Query: 558 HQIMLDHTTGRSRGFGFVTFDNENSVEKIFSDGQIHELGGKQVEIKKAEPKRAIGDYGND 379
           HQIMLDH+TGRSRGFGFVTF++E+SVE++ S+G++ +LGGKQVEIKKAEPK+  GD+ ++
Sbjct: 184 HQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPKKHGGDHSSN 243



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 33/91 (36%), Positives = 52/91 (57%)
 Frame = -2

Query: 678 EDIQVKGVLKTRKIFVGGLPLSLTEDELKEYFSAYGIVVEHQIMLDHTTGRSRGFGFVTF 499
           +D +  G   + KIFVGG+    TE+   ++F  YG + +  IM D  T   RGFGFVTF
Sbjct: 55  DDGRAPGGDSSGKIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTF 114

Query: 498 DNENSVEKIFSDGQIHELGGKQVEIKKAEPK 406
            + + ++K+  D   H + G+ VE+K+  P+
Sbjct: 115 SDPSVIDKVLEDE--HVIDGRTVEVKRTVPR 143


Top