BLASTX nr result

ID: Cnidium21_contig00022328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022328
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]   252   1e-64
ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2...   249   1e-63
emb|CBI30363.3| unnamed protein product [Vitis vinifera]              229   2e-57
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat...   219   2e-54
ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843...   129   2e-27

>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score =  252 bits (644), Expect = 1e-64
 Identities = 150/397 (37%), Positives = 236/397 (59%), Gaps = 9/397 (2%)
 Frame = +1

Query: 67   MSLHLGNLSTRISRNELERVFRRFGRCNVQVKDKFGFVVYDFTADAEKALKTLRGKNICG 246
            MSL+LGNLS+ I R++LERVF RFGRCN+Q+KD +GF VYDF A+A+KA++ +RGKNICG
Sbjct: 1    MSLYLGNLSSHIRRDDLERVFWRFGRCNIQLKDGYGFAVYDFPANADKAMRAMRGKNICG 60

Query: 247  EAINLSWSSRQPRPLESNRRIGRTHESQSERRRAGEGYGDKKMGSGNRRNYRITDKQTDV 426
            E I+L+WS++QPR     +R  R++E Q  R        ++K+GS ++R Y+   K+ D 
Sbjct: 61   ERISLTWSNKQPR---GXQRGARSYELQRGR------XSNRKLGSKSQRGYKXGVKKLDR 111

Query: 427  GDKRHKSVD-LGNEASYRKDNVEVYNGK-EHVVGDSSHFEGATAEPIPLDHE--SEQVGK 594
               R  +V+ L  E SY +DN++ Y  +  H  G++  +EG + EP  +D++   + VG 
Sbjct: 112  DGYRSDAVEMLDEERSYNQDNIKDYGEENHHNAGENLSYEGGSIEPDAVDNDRWGQHVGN 171

Query: 595  PINYNGL----DFERYNPNHADNKKDEKDDLHHISLSGASPTMTKSKEQKGTEKTSDAAL 762
              N NGL    +F+RY P H +++ +E D++  ++ SG SPT+  ++E+ G E+  DA L
Sbjct: 172  LSNGNGLENGMEFDRYEPYHGEDRSNEXDNI-QMTYSGGSPTLRSTQEKTGREQIGDAIL 230

Query: 763  KHPDNAKSLPTCYNCGKLGHKKLNCPRGEVTNRKVLSRINRRHDDKFYYKGKGEDEL-RR 939
               +  K    CY+CG+ GHK  NC +G  + +K  SR + + +D+   +G G  EL R 
Sbjct: 231  LPSNIPKPQLXCYHCGRPGHKMRNCLQGNASQKK-FSRFDLKRNDEINLRGSGGGELPRT 289

Query: 940  QRFISENVLQRSKSSVPVRKHRDERKESSYSKHRMVKRDKSSPLAVETHRSPGEEHQEAR 1119
                 E     S+ ++ +R H ++RK S   K+R + R  SS    E+HR+ G       
Sbjct: 290  GSKPHEKGHSGSRDTISLRWHTNDRKASGSGKYRRLIRSGSSAARKESHRTQG------- 342

Query: 1120 EEHRDGKRRRVDRQSPAKHQAKKVKVAESSPIHSDYT 1230
            +E+   K+ R++  +P +H  KK + + S P+ SDYT
Sbjct: 343  KEYGGKKQSRMETGTPKRH-IKKARTSVSPPMPSDYT 378


>ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1|
            predicted protein [Populus trichocarpa]
          Length = 693

 Score =  249 bits (636), Expect = 1e-63
 Identities = 146/398 (36%), Positives = 230/398 (57%), Gaps = 10/398 (2%)
 Frame = +1

Query: 67   MSLHLGNLSTRISRNELERVFRRFGRCNVQVKDKFGFVVYDFTADAEKALKTLRGKNICG 246
            MSLH+GNLS+ I R+ELERVF+RFGRCNV++KD +GFVVY+F  +AEKAL+ L  +NICG
Sbjct: 1    MSLHIGNLSSHIRRDELERVFQRFGRCNVRMKDGYGFVVYEFPPNAEKALRALHKRNICG 60

Query: 247  EAINLSWSSRQPRPLESNRRIGRTHESQSE-RRRAGEGYGDKKMGSGNRRNYRITDKQTD 423
            + + LSWS++QPRPL+   R  R++E Q       G  +  +K+GS ++++YR++  Q D
Sbjct: 61   KPLTLSWSNKQPRPLKRFARTDRSYEPQHRGNSDRGGDHVKRKLGSNDQQDYRLSFTQAD 120

Query: 424  VGDKRHKSVDLGNEASY-RKDNVEVYNGKEHVVGDSSHF--EGATAEPIPLDHE--SEQV 588
               +   S D+  E     +D++E +  KEH  G    F  E     P P+D++   EQ 
Sbjct: 121  RNSRIPSSADMHQEEIVNHQDDIEDHTNKEH-QGYREDFLDERGRVGPDPMDNDRWGEQF 179

Query: 589  GKPIN----YNGLDFERYNPNHADNKKDEKDDLHHISLSGASPTMTKSKEQKGTEKTSDA 756
              P N     NG++F+RY+P    ++++  ++L   + SG +  +  S+E  G +  SDA
Sbjct: 180  HNPPNEVGVENGVEFDRYDPYEGFDRRNNDENLQK-AYSGGTLALQSSQENAGGDHASDA 238

Query: 757  ALKHPDNAKSLPTCYNCGKLGHKKLNCPRGEVTNRKVLSRINRRHDDKFYYKGKGEDELR 936
             L    + KS  TCY CG  GHK  NCP+   + R V +R + RH D  +  G+G+ +  
Sbjct: 239  TLNRLSDVKSQETCYKCGGSGHKMRNCPQENASQRNV-TRFDSRHTDDIHRSGRGKGDPE 297

Query: 937  RQRFISENVLQRSKSSVPVRKHRDERKESSYSKHRMVKRDKSSPLAVETHRSPGEEHQEA 1116
            +    S   LQ S+ ++P R+ +++++ S   +H  V R+  S ++ ET  S  +E++  
Sbjct: 298  KNGSRSWEKLQSSRDAIPGRRLKNDKESSGSGRHEEVTRNGRSAVSKETDWSCKKEYERK 357

Query: 1117 REEHRDGKRRRVDRQSPAKHQAKKVKVAESSPIHSDYT 1230
            R+       RR + +SP +H  KK + + SS +HSD T
Sbjct: 358  RQ-------RRKEIESPKRHGTKKGRRSTSSFLHSDNT 388


>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  229 bits (583), Expect = 2e-57
 Identities = 142/397 (35%), Positives = 227/397 (57%), Gaps = 9/397 (2%)
 Frame = +1

Query: 67   MSLHLGNLSTRISRNELERVFRRFGRCNVQVKDKFGFVVYDFTADAEKALKTLRGKNICG 246
            MSL+LGNLS+ I R++LERVF RFGRCN+Q+KD +GF VYDF A+A+KA++ +RGKNICG
Sbjct: 1    MSLYLGNLSSHIRRDDLERVFWRFGRCNIQLKDGYGFAVYDFPANADKAMRAMRGKNICG 60

Query: 247  EAINLSWSSRQPRPLESNRRIGRTHESQSERRRAGEGYGDKKMGSGNRRNYRITDKQTDV 426
            E I+L+WS++QPR  +   R  R++E Q  R        ++K+GS ++R Y++  K+ D 
Sbjct: 61   ERISLTWSNKQPRGFQ---RGARSYELQRGR------ISNRKLGSKSQRGYKVGVKKLDR 111

Query: 427  GDKRHKSVD-LGNEASYRKDNVEVYNGK-EHVVGDSSHFEGATAEPIPLDHE--SEQVGK 594
               R  +V+ L  E SY +DN++ Y  +  H  G++  +EG + EP  +D++   + VG 
Sbjct: 112  DGYRSDAVEMLDEERSYNQDNIKDYGEENHHNAGENLSYEGGSIEPDAVDNDRWGQHVGN 171

Query: 595  PINYNGL----DFERYNPNHADNKKDEKDDLHHISLSGASPTMTKSKEQKGTEKTSDAAL 762
              N NGL    +F+RY P H +++ +E D++  ++ SG SPT+  ++E+ G E       
Sbjct: 172  LSNGNGLENGMEFDRYEPYHGEDRSNEDDNI-QMTYSGGSPTLRSTQEKTGRE------- 223

Query: 763  KHPDNAKSLPTCYNCGKLGHKKLNCPRGEVTNRKVLSRINRRHDDKFYYKGKGEDEL-RR 939
                            ++GHK  NC +G  + +K  SR + + +D+   +G G  EL R 
Sbjct: 224  ----------------QIGHKMRNCLQGNASQKK-FSRFDLKRNDEINLRGSGGGELPRT 266

Query: 940  QRFISENVLQRSKSSVPVRKHRDERKESSYSKHRMVKRDKSSPLAVETHRSPGEEHQEAR 1119
                 E     S+ ++ +R H ++RK S   K+R + R  SS    E+HR+ G       
Sbjct: 267  GSKPHEKGHSGSRDTISLRWHTNDRKASGSGKYRRLIRSGSSAARKESHRTQG------- 319

Query: 1120 EEHRDGKRRRVDRQSPAKHQAKKVKVAESSPIHSDYT 1230
            +E+   K+ R++  +P +H  KK + + S P+ SDYT
Sbjct: 320  KEYGGKKQSRMETGTPKRH-IKKARTSVSPPMPSDYT 355


>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
            gi|223530325|gb|EEF32219.1| Splicing factor,
            arginine/serine-rich, putative [Ricinus communis]
          Length = 676

 Score =  219 bits (557), Expect = 2e-54
 Identities = 146/397 (36%), Positives = 221/397 (55%), Gaps = 12/397 (3%)
 Frame = +1

Query: 67   MSLHLGNLSTRISRNELERVFRRFGRCNVQVKDKFGFVVYDFTADAEKALKTLRGKNICG 246
            MSL++GNLS+RI R+ELERVF+RFG+C+V++KD +GFVVY+F  +AEKAL+ L  K+ICG
Sbjct: 1    MSLYIGNLSSRIRRDELERVFQRFGQCDVRLKDGYGFVVYEFPPNAEKALRALEKKHICG 60

Query: 247  EAINLSWSSRQPRPLESNRRI-GRTHESQSERRRAGEGYGDKKMGSGNRRNYRITDKQTD 423
            EA+NL+WS++QPR      R  GR++E Q  R          K+GS N  +YR + KQ+D
Sbjct: 61   EALNLTWSNKQPRQFNRLARAGGRSYEPQHSRDSV-----KGKLGS-NVLDYRTSVKQSD 114

Query: 424  VGDKRHKSVDL-GNEASYRKDNVEVYNGKEH------VVGDSSHFEGATAEPIPLDHESE 582
               KR  S ++   E  Y K+  +   G EH       +G+   FE   ++ +  D   E
Sbjct: 115  GFSKRSASTNMRDKEVMYDKNRAKDNFGDEHSGYREEFLGEGGRFE---SDRVENDRWGE 171

Query: 583  QVGKPINYNGLD----FERYNPNHADNKKDEKDDLHHISLSGASPTMTKSKEQKGTEKTS 750
            Q+   +N NGL     FERY P   D ++     +H ++  G SP + + ++  G + ++
Sbjct: 172  QLHYQLNENGLKNDVVFERYEP-CPDYERKYDSGVHQLAYRGGSPALRRPQKDIGRDNSN 230

Query: 751  DAALKHPDNAKSLPTCYNCGKLGHKKLNCPRGEVTNRKVLSRINRRHDDKFYYKGKGEDE 930
            +  LK   +A    TCY CG  GHK  NCP+ E ++ +  +R + RHDD+   +G G  E
Sbjct: 231  EVNLKCSRDANFQATCYQCGGSGHKMRNCPQ-ESSSLRNSTRSDPRHDDR---RGSGGSE 286

Query: 931  LRRQRFISENVLQRSKSSVPVRKHRDERKESSYSKHRMVKRDKSSPLAVETHRSPGEEHQ 1110
              R+RF S +  + S+ S+P R  +++ K SS  K +    + SSP+  ET +S      
Sbjct: 287  --RRRFGSRSQERSSRDSMPKRLLKNDTKSSSLGKDQKSIWNGSSPVGNETDKS------ 338

Query: 1111 EAREEHRDGKRRRVDRQSPAKHQAKKVKVAESSPIHS 1221
              +      KR R + +SP  H  KK + + SS +HS
Sbjct: 339  -LKTHDGGNKRSRKEIESPKGHDTKKTRRSFSSSLHS 374


>ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843176 [Brachypodium
           distachyon]
          Length = 628

 Score =  129 bits (323), Expect = 2e-27
 Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 9/277 (3%)
 Frame = +1

Query: 67  MSLHLGNLSTRISRNELERVFRRFGRCNVQVKDKFGFVVYDFTADAEKALKTLRGKNICG 246
           MSLH+G LS+ + +  LE +F+ FGRC V++K+ +GF V+D + DA +AL+ L GK +CG
Sbjct: 1   MSLHIGRLSSHVRQGYLEHLFQAFGRCTVKLKNGYGFAVFDSSDDAARALRELHGKPVCG 60

Query: 247 EAINLSWSSRQPRPLESNRRIGRTHESQSERRRAGEGYGDKKMGSGNRRNYRITDKQTDV 426
           E I ++WS  QP+   S+RR  R  ES S  RR+ +G G  +      +    T   T  
Sbjct: 61  ERITVNWSKHQPKFSLSSRRSSRFIES-SHGRRSKDGVGSLRFSEPADQKNHHTSNAT-- 117

Query: 427 GDKRHKSVDLGNEASYRKD-NVEVYN--GKEHVVGDSSHFEGATAEPIPLDHESEQVGKP 597
                 S +    A  R D N E     G +   G+    +G T++   ++H+       
Sbjct: 118 ------SCNPDGAAEKRSDQNAEGLEDVGDDEDPGEMKMGDGGTSDANAIEHDRWGDAGK 171

Query: 598 INY--NGLDFERYNPNHADNKKDEKDDLHHISLSGASPTMTKSKEQKGTEKTSDAALKH- 768
            N+  +G DF+R+ P H   KK+EK+ +             K+     +E   +  ++H 
Sbjct: 172 GNHGEDGDDFDRFEPYHGYGKKEEKEKI------------GKADHGHFSEVWQNHPVEHF 219

Query: 769 ---PDNAKSLPTCYNCGKLGHKKLNCPRGEVTNRKVL 870
               D  K  PTCYNCG  GH   NC    V   K L
Sbjct: 220 DLNHDKPKYCPTCYNCGSAGHVTRNCSEEAVGKFKTL 256


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