BLASTX nr result

ID: Cnidium21_contig00022327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022327
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]   138   2e-30
ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|2...   136   7e-30
emb|CBI30363.3| unnamed protein product [Vitis vinifera]              131   2e-28
ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putat...   125   2e-26
ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843...   110   4e-22

>emb|CAN79169.1| hypothetical protein VITISV_012165 [Vitis vinifera]
          Length = 685

 Score =  138 bits (348), Expect = 2e-30
 Identities = 94/244 (38%), Positives = 133/244 (54%), Gaps = 19/244 (7%)
 Frame = -2

Query: 908  LGQTLPSSSKELQMSQKMSLMNSAIHESEGDQRGQ----LGHAGSCDFNLYTTSGSGENP 741
            LG+ L SS  +++     S ++    ES+    GQ     G AGS +     T  + EN 
Sbjct: 445  LGKPLLSSPNKVERKLNGSSVDVTNPESKEVLAGQGQXVEGDAGSENSKQENTMAAVENE 504

Query: 740  SAVQSVQVDDDEDMDKTILDKRDGYHAIVRDAQNEDNLSAMGLDEG---PLVAGNVSTQD 570
            +AV  ++++DD  M+K    +RD +   +    NE  L     ++G   P +    S ++
Sbjct: 505  NAVSFIKMEDD--MNKNQPQQRDDHGNCIPLTSNE--LKNPCTEKGAFTPTILSPESLRE 560

Query: 569  ACVA-------LDHPSLPTN--NLHXXXXXXXXXXXSITAEEMNMVLKFYGLEQPEG--- 426
                       ++H   PT   +              I++EE+  +LK+YGLE  E    
Sbjct: 561  TAELQKSGAWMMEHLLAPTKKPDSEAMAGSFAGNSTCISSEEVFKILKYYGLEHSEDNKM 620

Query: 425  HVPVEAFFGSARLWPWEIIYYRRLKKGPISVENYVRRLSQNEEFGIVDKYVRSSSGWGDP 246
            H+PVE +FGSARLWPWEIIYYRRLKKGPIS ENY RR++QN EFGIVDKY+RSSSGWG+ 
Sbjct: 621  HLPVEDYFGSARLWPWEIIYYRRLKKGPISTENYDRRIAQNREFGIVDKYIRSSSGWGEL 680

Query: 245  SKDS 234
             +D+
Sbjct: 681  VQDN 684


>ref|XP_002308446.1| predicted protein [Populus trichocarpa] gi|222854422|gb|EEE91969.1|
            predicted protein [Populus trichocarpa]
          Length = 693

 Score =  136 bits (343), Expect = 7e-30
 Identities = 95/242 (39%), Positives = 125/242 (51%), Gaps = 22/242 (9%)
 Frame = -2

Query: 908  LGQTLPSSSKELQMSQKMSLMNSAIHESEG-------DQRGQLGHAGSCDFNLYTTSGSG 750
            LGQ LPSSS + Q+  K S  N+   ES+           G+ G  G     L T +   
Sbjct: 450  LGQALPSSSNKAQLIMKGSSDNATTPESKEVFIEEVQPVEGETGLQGD-KHGLKTVA--- 505

Query: 749  ENPSAVQSVQVDDDEDMDKTILDKRDGYHAIVRDAQNEDNLSAMGL-DEGPLVAGNVSTQ 573
             N +AV S + D + +  + +    D    +        N S   L +EG L AGN+S +
Sbjct: 506  VNDNAVSSSKADTEMEKYQPLQKDSDDCLMVSNSLHKATNSSTQILSEEGTLAAGNLSLE 565

Query: 572  DAC---------VALDHPSLPTNNL--HXXXXXXXXXXXSITAEEMNMVLKFYGL---EQ 435
                           +H  +P   L              SI+A E++ VLK YGL   ++
Sbjct: 566  PVLEMECQNSDTFETEHVQVPLKKLDPQAPASSSSFHSTSISAGELSSVLKHYGLGCQDE 625

Query: 434  PEGHVPVEAFFGSARLWPWEIIYYRRLKKGPISVENYVRRLSQNEEFGIVDKYVRSSSGW 255
             E  +P EA+FGSARLWPWEII+YRRLKKG IS+ENY RR+ QN EFGIVDKY+RSSSGW
Sbjct: 626  NEKPLPAEAYFGSARLWPWEIIHYRRLKKGLISIENYARRVDQNREFGIVDKYIRSSSGW 685

Query: 254  GD 249
            G+
Sbjct: 686  GE 687


>emb|CBI30363.3| unnamed protein product [Vitis vinifera]
          Length = 651

 Score =  131 bits (330), Expect = 2e-28
 Identities = 80/192 (41%), Positives = 111/192 (57%), Gaps = 15/192 (7%)
 Frame = -2

Query: 764  TSGSGENPSAVQSVQVDDDEDMDKTILDKRDGYHAIVRDAQNEDNLSAMGLDEG---PLV 594
            T  + EN +AV  ++++DD  M+K    +RD +   +    NE  L     ++G   P +
Sbjct: 450  TMAAVENENAVSFIKMEDD--MNKNQPQQRDDHGNCIPLTSNE--LKNPCTEKGAFTPTI 505

Query: 593  AGNVSTQDACVA-------LDHPSLPTN--NLHXXXXXXXXXXXSITAEEMNMVLKFYGL 441
                S ++           ++H   PT   +              I++EE+  +LK+YGL
Sbjct: 506  LSPESLRETAELQNSGAWMMEHLLAPTKKPDSEAMAGSFAGNSTCISSEEVFKILKYYGL 565

Query: 440  EQPEG---HVPVEAFFGSARLWPWEIIYYRRLKKGPISVENYVRRLSQNEEFGIVDKYVR 270
            E  E    H+PVE +FGSARLWPWEIIYYRRLKKGPIS ENY RR++QN EFGIVDKY+R
Sbjct: 566  EHSEDNKMHLPVEDYFGSARLWPWEIIYYRRLKKGPISTENYDRRIAQNREFGIVDKYIR 625

Query: 269  SSSGWGDPSKDS 234
            SSSGWG+  +D+
Sbjct: 626  SSSGWGELVQDN 637


>ref|XP_002530164.1| Splicing factor, arginine/serine-rich, putative [Ricinus communis]
            gi|223530325|gb|EEF32219.1| Splicing factor,
            arginine/serine-rich, putative [Ricinus communis]
          Length = 676

 Score =  125 bits (313), Expect = 2e-26
 Identities = 92/257 (35%), Positives = 139/257 (54%), Gaps = 32/257 (12%)
 Frame = -2

Query: 908  LGQTLPSSSKELQMSQKMSLMNSAIHES-----------EGDQRGQLGHAGSCDFNLYTT 762
            LGQ LPSSS + Q++ K S  N    ES           EGD    L  A      +   
Sbjct: 434  LGQPLPSSSNKAQLNLKGSSDNVTTPESKEILTEKEQPVEGDNG--LEEAKVEKRIVAVN 491

Query: 761  SGSGENPSAVQSVQVDDDEDMDKTILDKRDGYHAIVRDAQNE-DNLSAMGLDEGPLVAGN 585
            S  G  P   + ++++  + ++K   D     H +   +  E  N+S + +++G +  G 
Sbjct: 492  SEIGVTPPQAE-IEMEKGQPLEKDTED-----HQMASCSLYEVSNISTVAVEKGTVDNGG 545

Query: 584  ---------------VSTQDACVALDHP-SLPTNNLHXXXXXXXXXXXSITAEEMNMVLK 453
                           ++T+ A V + +P S P+ +L             I++EE+++V+K
Sbjct: 546  SPKSLVEMNCQDSDKLTTELAPVQMKNPDSDPSISLRSGHSLS------ISSEELHLVIK 599

Query: 452  -FYGLE---QPEGHVPVEAFFGSARLWPWEIIYYRRLKKGPISVENYVRRLSQNEEFGIV 285
             +YG +   + + H+P +A+FGSARLWPWEIIYYRRLKKGPISVENY RRL QN EFG+V
Sbjct: 600  HYYGHDLQNENQRHLPADAYFGSARLWPWEIIYYRRLKKGPISVENYARRLDQNREFGVV 659

Query: 284  DKYVRSSSGWGDPSKDS 234
            DKY+RSSSGW + ++++
Sbjct: 660  DKYIRSSSGWEELTQEN 676


>ref|XP_003572587.1| PREDICTED: uncharacterized protein LOC100843176 [Brachypodium
           distachyon]
          Length = 628

 Score =  110 bits (276), Expect = 4e-22
 Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
 Frame = -2

Query: 485 ITAEEMNMVLKFYGLEQPEGHV---PVEAFFGSARLWPWEIIYYRRLKKGPISVENYVRR 315
           +T  E+   LK YG+E  E  +   PVE FFG+ARLWPWEIIYYRR KKGPIS ENY +R
Sbjct: 545 LTMNEVVSALKHYGMEAREIGLLNQPVEKFFGAARLWPWEIIYYRRRKKGPISTENYAKR 604

Query: 314 LSQNEEFGIVDKYVRSSSGW 255
           + QN+EFGIVD+YVRSSSGW
Sbjct: 605 VEQNKEFGIVDQYVRSSSGW 624


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