BLASTX nr result

ID: Cnidium21_contig00022325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022325
         (956 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|35548...    94   6e-17
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    91   3e-16
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    90   7e-16
ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|2...    90   7e-16
ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    88   3e-15

>ref|XP_003598510.1| F-box protein [Medicago truncatula] gi|355487558|gb|AES68761.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 3/211 (1%)
 Frame = +2

Query: 122 ELLLEILYRSEVKSLVRFMCVSKSWYGLINHPKFVKKHLCFNSKFNSHVIFNAYNAGNRK 301
           +++LEI+ R  VK ++RF CV KSW  LI+ PKFVKK LC ++  N H +  AY+  +RK
Sbjct: 32  DVILEIICRLPVKFILRFQCVCKSWNSLISDPKFVKKQLCVSTTRNLHFLNYAYD--SRK 89

Query: 302 AISLLRVDKMPIRLLDIDVSAK-DRFDYPRKINFVDFSKKMHVASSINGIVLLMNIDEML 478
            I    +   P+     D+++   + D+P       ++K      S NGIV +   D   
Sbjct: 90  YI----LTSYPLDSDFTDINSNFTQSDWP-------YAKFYRFIGSCNGIVCI--ADNEY 136

Query: 479 GKFVVLWNPAINQWKPIKLDEKAGSGKGLERSAFGLGYDEGNDDLKIIRVVTKSTSTTEF 658
              V+ WNP+  ++K + L EK  +G  +    FG GYD   D+ K++ VV +     E 
Sbjct: 137 TSLVICWNPSTRKFKELPLFEKPMTGVNV--MTFGFGYDSSKDNYKVV-VVLEYLVLDED 193

Query: 659 YKNFKWARVEVYSVNRGCWKDVD--HEGELL 745
              F   +V+V+++    W+ +   H G L+
Sbjct: 194 DSFFNKTQVKVHTLGTNIWRTIQDYHFGGLI 224


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
 Frame = +2

Query: 122 ELLLEILYRSEVKSLVRFMCVSKSWYGLINHPKFVKKHLCF--NSKFNSHVIFNAYNAGN 295
           E+L++I  R  VK L+R  C+ K+WY LI++  F+  H  +  +S  N+++I   Y+  N
Sbjct: 8   EVLIKIFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSN 67

Query: 296 RKAISLLRVDKMPIRLLDIDVSAKDRFDYPRKINFVDFSKKMHVASSINGIVLLMNIDEM 475
           +K    L  D       D   S     D+P + ++  F     +  S NGI+ L +    
Sbjct: 68  KKERFALHFDD------DDMFSEYQELDFPLESSWDYFE----IVGSCNGIICLTDNHSH 117

Query: 476 LGKFVVLWNPAINQWKPIKLDEKAGSGKGLERSAFGLGYDEGNDDLKIIRVVTKSTSTTE 655
           + K +VLWNP+I     + L   +     +     G G+D   +D K+IR+V  ST+   
Sbjct: 118 ILKRIVLWNPSIGLSVTLPLQRISYK---VSNVVLGFGFDSRTNDYKVIRIVYYSTNDDS 174

Query: 656 FYKNFKWARVEVYSVNRGCWKDVDHEGELLFWPRQYHCNFILKGAPYFVG 805
                    VE++ ++RG W+  +      +   +Y    +L+GA ++VG
Sbjct: 175 LMVP---PEVEIFELSRGTWRINNSASVPAYDVSKYSSQIVLEGAIHWVG 221


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 65/202 (32%), Positives = 99/202 (49%), Gaps = 1/202 (0%)
 Frame = +2

Query: 122 ELLLEILYRSEVKSLVRFMCVSKSWYGLINHPKFVKKHLCFNSKFNSHVIFNAYNAGNRK 301
           +++ EI+ R  VK ++RF CV KSW  LI+ PKFVKK LC ++  N H  F  Y   +RK
Sbjct: 32  DVIPEIICRLPVKFILRFRCVCKSWNSLISDPKFVKKQLCVSTTRNLH--FRNYAYDSRK 89

Query: 302 AISLLRVDKMPIRLLDIDVSAK-DRFDYPRKINFVDFSKKMHVASSINGIVLLMNIDEML 478
            I    +   P+     D+++   + D+P       ++K      S NGIV L   D   
Sbjct: 90  YI----LTSYPLDSDFTDITSNFTQSDWP-------YAKFYRFIGSCNGIVCL--ADNEY 136

Query: 479 GKFVVLWNPAINQWKPIKLDEKAGSGKGLERSAFGLGYDEGNDDLKIIRVVTKSTSTTEF 658
              V+ WNP+  ++K + L EK  +  GL    FG GYD   D+ K++ VV       E 
Sbjct: 137 TSLVICWNPSTRKFKELPLFEKPTT--GLNVMTFGFGYDSSKDNYKVV-VVLDYQFLDED 193

Query: 659 YKNFKWARVEVYSVNRGCWKDV 724
           Y      +V V+++    W+ +
Sbjct: 194 YSFVNKTQVMVHTLGTNIWRTI 215


>ref|XP_002316906.1| predicted protein [Populus trichocarpa] gi|222859971|gb|EEE97518.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 90.1 bits (222), Expect = 7e-16
 Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 6/266 (2%)
 Frame = +2

Query: 122 ELLLEILYRSEVKSLVRFMCVSKSWYGLINHPKFVKKHLCFNSKFNSHVIFNAYNAGNRK 301
           +L+ EILY+  +KSL+R   + KSW  LI  P F+ KHL        H I    ++ +R+
Sbjct: 8   DLIQEILYKLPIKSLLRCTSLCKSWNSLIKSPTFIFKHL-------QHTI----SSTDRQ 56

Query: 302 AISLLRV------DKMPIRLLDIDVSAKDRFDYPRKINFVDFSKKMHVASSINGIVLLMN 463
            + LLR+      ++  +RL + D +   +  +P    F       HV  S NG++ L N
Sbjct: 57  NLFLLRLCSREREEQYSLRLDNQDFNEHMQLHFP----FKSSESYFHVIGSSNGLICLAN 112

Query: 464 IDEMLGKFVVLWNPAINQWKPIKLDEKAGSGKGLERSAFGLGYDEGNDDLKIIRVVTKST 643
           I + L    +LWNP I ++  +K         G   S  G GYD   +D K+IR+V+   
Sbjct: 113 IFQSLIVSFILWNPLIQKYMIVK-----PRILGPVYSFVGFGYDSRANDYKLIRMVSFQK 167

Query: 644 STTEFYKNFKWARVEVYSVNRGCWKDVDHEGELLFWPRQYHCNFILKGAPYFVGMDVMPD 823
           S    +++  +  + +YS+N G W+ +   G L +   Q   +  L G  +++       
Sbjct: 168 SK---FRSENFPEIALYSLNEGSWRGIRQTGPLRYDTDQRVSSAFLNGVVHWIAYRADQH 224

Query: 824 SAVAFQHEILARFDPCTGFYKKIQYP 901
             V+    ++  FD     + +I  P
Sbjct: 225 EGVS---NVVLGFDMSDEIFLEIALP 247


>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 1/202 (0%)
 Frame = +2

Query: 122 ELLLEILYRSEVKSLVRFMCVSKSWYGLINHPKFVKKHLCFNSKFNSHVIFNAYNAGNRK 301
           +++ EIL R  VK ++RF CV KSW  LI+ PKFVKK L  +  +N H  F  Y+  + K
Sbjct: 36  DVIPEILCRLPVKFILRFRCVCKSWNFLISDPKFVKKQLSVSIAWNLH--FLNYSRWSHK 93

Query: 302 AISLLRVDKMPIRLLDIDVSAK-DRFDYPRKINFVDFSKKMHVASSINGIVLLMNIDEML 478
            I    +   PI  +  D+++   + +Y        + K   +  S NGIV + +    L
Sbjct: 94  YI----LTSYPIDSIFTDITSNFIQSEYNLSNEDRTYGKLYFIIGSCNGIVCIADNHNGL 149

Query: 479 GKFVVLWNPAINQWKPIKLDEKAGSGKGLERSAFGLGYDEGNDDLKIIRVVTKSTSTTEF 658
              V+LWNP+  + K + L EK+    G     FG GYD  ND+ K++ VV       E 
Sbjct: 150 ---VILWNPSTKKIKQLPLYEKS---NGPTLMTFGFGYDSLNDNYKVV-VVLAYLVLDED 202

Query: 659 YKNFKWARVEVYSVNRGCWKDV 724
           Y+ F   +V+V+++    W+ +
Sbjct: 203 YRFFNKNKVKVHTLGTNIWRTI 224


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