BLASTX nr result

ID: Cnidium21_contig00022317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022317
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21507.3| unnamed protein product [Vitis vinifera]              177   6e-43
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   177   6e-43
ref|XP_002532272.1| Protein AFR, putative [Ricinus communis] gi|...   169   2e-40
emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]   166   2e-39
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   155   4e-36

>emb|CBI21507.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  177 bits (450), Expect = 6e-43
 Identities = 89/163 (54%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
 Frame = +2

Query: 14  SMADKTTDQPAPPLIPNLPNDISLQCIARIPRPHHPYLSLISKSFHSTLHSPEFFATRSL 193
           S +  ++   +  LIPNLP+D++LQCIAR+PR  HP+L L+ KS+ S L+SP+FF+TRSL
Sbjct: 9   SSSSSSSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSL 68

Query: 194 LNSTQQSLYLNIRVNSSFKWYTLNQQPH----LPKNPNFLNPLANIKKQPIGSCFAVLGF 361
           LN  Q SLYL +RVN + KW+ LNQ P     LP NP+            IGS FA +G 
Sbjct: 69  LNCMQHSLYLIVRVNCTLKWFVLNQNPRILASLPPNPS----------PAIGSAFAAIGS 118

Query: 362 KIYVIGGSVNEIASNDVWVFDCRFGKWEIGAKMRVCREFAAAG 490
           KI+V+GGSVN++AS  V VFDCRFG WE+G +MRV REFAAAG
Sbjct: 119 KIFVLGGSVNDVASPTVQVFDCRFGTWELGPRMRVGREFAAAG 161


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  177 bits (450), Expect = 6e-43
 Identities = 89/163 (54%), Positives = 114/163 (69%), Gaps = 4/163 (2%)
 Frame = +2

Query: 14  SMADKTTDQPAPPLIPNLPNDISLQCIARIPRPHHPYLSLISKSFHSTLHSPEFFATRSL 193
           S +  ++   +  LIPNLP+D++LQCIAR+PR  HP+L L+ KS+ S L+SP+FF+TRSL
Sbjct: 9   SSSSSSSSSSSSDLIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSL 68

Query: 194 LNSTQQSLYLNIRVNSSFKWYTLNQQPH----LPKNPNFLNPLANIKKQPIGSCFAVLGF 361
           LN  Q SLYL +RVN + KW+ LNQ P     LP NP+            IGS FA +G 
Sbjct: 69  LNCMQHSLYLIVRVNCTLKWFVLNQNPRILASLPPNPS----------PAIGSAFAAIGS 118

Query: 362 KIYVIGGSVNEIASNDVWVFDCRFGKWEIGAKMRVCREFAAAG 490
           KI+V+GGSVN++AS  V VFDCRFG WE+G +MRV REFAAAG
Sbjct: 119 KIFVLGGSVNDVASPTVQVFDCRFGTWELGPRMRVGREFAAAG 161


>ref|XP_002532272.1| Protein AFR, putative [Ricinus communis]
           gi|223528032|gb|EEF30112.1| Protein AFR, putative
           [Ricinus communis]
          Length = 370

 Score =  169 bits (429), Expect = 2e-40
 Identities = 90/157 (57%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
 Frame = +2

Query: 29  TTDQPAPPLIPNLPNDISLQCIARIPRPHHPYLSLISKSFHSTLHSPEFFATRSLLNSTQ 208
           TT    P LIP LP+DISL  +ARIPR HHP LSL+SKSFHS   SP F+ATRSLLN +Q
Sbjct: 11  TTSSNLPLLIPALPDDISLNILARIPRSHHPLLSLVSKSFHSLFSSPLFYATRSLLNFSQ 70

Query: 209 QSLYLNIR--VNSSFKWYTLNQQPHLPKN-PNFLNPLANIKKQPIGSCFAVLGFKIYVIG 379
             LYL+IR  + SS +W+TL Q    PKN PNFL  L       +GS    LG KIYVIG
Sbjct: 71  PFLYLSIRFAITSSLRWFTLYQNSPNPKNPPNFLVQLLPTPSPLVGSATVSLGHKIYVIG 130

Query: 380 GSVNEIASNDVWVFDCRFGKWEIGAKMRVCREFAAAG 490
           G +N+I S+ VW  DCRF  WE+  KM + REFAAAG
Sbjct: 131 GCLNDIPSSHVWTLDCRFHMWELSPKMSISREFAAAG 167


>emb|CAN74979.1| hypothetical protein VITISV_028480 [Vitis vinifera]
          Length = 285

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/144 (57%), Positives = 103/144 (71%), Gaps = 4/144 (2%)
 Frame = +2

Query: 71  NDISLQCIARIPRPHHPYLSLISKSFHSTLHSPEFFATRSLLNSTQQSLYLNIRVNSSFK 250
           ND++LQCIAR+PR  HP+L L+ KS+ S L+SP+FF+TRSLLN  Q SLYL +RVN + K
Sbjct: 41  NDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVRVNCTLK 100

Query: 251 WYTLNQQPH----LPKNPNFLNPLANIKKQPIGSCFAVLGFKIYVIGGSVNEIASNDVWV 418
           W+ LNQ P     LP NP+            IGS FA +G KI+V+GGSVN++AS  V V
Sbjct: 101 WFVLNQNPRILASLPPNPS----------PAIGSAFAAIGSKIFVLGGSVNDVASPTVQV 150

Query: 419 FDCRFGKWEIGAKMRVCREFAAAG 490
           FDCRFG WE+G +MRV REFAAAG
Sbjct: 151 FDCRFGTWELGPRMRVGREFAAAG 174


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score =  155 bits (391), Expect = 4e-36
 Identities = 84/162 (51%), Positives = 108/162 (66%), Gaps = 3/162 (1%)
 Frame = +2

Query: 14  SMADKTTDQPAPP-LIPNLPNDISLQCIARIPRPHHPYLSLISKSFHSTLHSPEFFATRS 190
           S A ++ +  +P  LIP LPND++L C+ARIPR HHP LSL+SK   S L+SP  F TRS
Sbjct: 3   SWACRSEESESPNNLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRS 62

Query: 191 LLNSTQQSLYLNIRV-NSSFKWYTLNQQPHLPKNPN-FLNPLANIKKQPIGSCFAVLGFK 364
           LL  TQ  LYL +R  +SS +W+TL++      NPN  L PL  I    +GS +AVLG  
Sbjct: 63  LLQCTQPLLYLTLRSRDSSLQWFTLHR-----TNPNPLLAPLPPIPSPAVGSAYAVLGPT 117

Query: 365 IYVIGGSVNEIASNDVWVFDCRFGKWEIGAKMRVCREFAAAG 490
           IYV+GGS+ ++ S+ VW+ DCRF +W  G  MRV REFAAAG
Sbjct: 118 IYVLGGSIQDVPSSHVWLLDCRFHRWLRGPPMRVAREFAAAG 159


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