BLASTX nr result

ID: Cnidium21_contig00022316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022316
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274464.1| PREDICTED: uncharacterized protein LOC100256...   127   3e-27
ref|NP_172069.1| vacuolar ATPase assembly integral membrane prot...   121   2e-25
ref|XP_002881191.1| hypothetical protein ARALYDRAFT_344930 [Arab...   121   2e-25
ref|NP_565728.1| Vacuolar ATPase assembly integral membrane prot...   119   7e-25
ref|XP_002889564.1| hypothetical protein ARALYDRAFT_470584 [Arab...   118   2e-24

>ref|XP_002274464.1| PREDICTED: uncharacterized protein LOC100256132 [Vitis vinifera]
          Length = 106

 Score =  127 bits (319), Expect = 3e-27
 Identities = 63/106 (59%), Positives = 75/106 (70%)
 Frame = -1

Query: 571 MAGVMEKFIVASMFMWIVPVAILYGFNHELFPGXXXXXXXXXXXXSGFLAVISVNVVIAF 392
           MAGV++KF +ASM MWI P+AILYGFNH LFPG            SGF+AVISVN+VIAF
Sbjct: 1   MAGVIKKFFIASMLMWIAPIAILYGFNHNLFPGSTQLSSYSATLLSGFIAVISVNIVIAF 60

Query: 391 YICLAMREPVQKHEPDPKFLSEATASVKQFKPVETGESSSTHKKEE 254
           YI +AM+EP  KHEPDP FL+ A ASV Q  P ET + S +  K+E
Sbjct: 61  YIFMAMKEPSDKHEPDPAFLAAAKASVSQSTPGETEDPSQSRDKQE 106


>ref|NP_172069.1| vacuolar ATPase assembly integral membrane protein VMA21-like
           domain-containing protein [Arabidopsis thaliana]
           gi|61742516|gb|AAX55079.1| hypothetical protein
           At1g05780 [Arabidopsis thaliana]
           gi|332189769|gb|AEE27890.1| vacuolar ATPase assembly
           integral membrane protein VMA21-like domain-containing
           protein [Arabidopsis thaliana]
          Length = 106

 Score =  121 bits (303), Expect = 2e-25
 Identities = 60/106 (56%), Positives = 70/106 (66%)
 Frame = -1

Query: 571 MAGVMEKFIVASMFMWIVPVAILYGFNHELFPGXXXXXXXXXXXXSGFLAVISVNVVIAF 392
           MAGVM KF++ASMFMWI+PVAILYGFNH L PG            SGFLAV+SVN VI F
Sbjct: 1   MAGVMHKFLIASMFMWILPVAILYGFNHNLLPGSTTLSPHSLILLSGFLAVVSVNTVIVF 60

Query: 391 YICLAMREPVQKHEPDPKFLSEATASVKQFKPVETGESSSTHKKEE 254
           YIC+AM+EP  KH+PD  FL+EA  SV +     T       KK+E
Sbjct: 61  YICMAMKEPADKHKPDAAFLAEAKDSVNKLTKGATSSDDHALKKQE 106


>ref|XP_002881191.1| hypothetical protein ARALYDRAFT_344930 [Arabidopsis lyrata subsp.
           lyrata] gi|297327030|gb|EFH57450.1| hypothetical protein
           ARALYDRAFT_344930 [Arabidopsis lyrata subsp. lyrata]
          Length = 105

 Score =  121 bits (303), Expect = 2e-25
 Identities = 59/105 (56%), Positives = 75/105 (71%)
 Frame = -1

Query: 571 MAGVMEKFIVASMFMWIVPVAILYGFNHELFPGXXXXXXXXXXXXSGFLAVISVNVVIAF 392
           MAGVM+KF++ASMFMWI+P+AILYGFN++L PG            SGFLAV+SVNVVI F
Sbjct: 1   MAGVMQKFLIASMFMWILPIAILYGFNNDLLPGSTTLSPHSLTLLSGFLAVVSVNVVIVF 60

Query: 391 YICLAMREPVQKHEPDPKFLSEATASVKQFKPVETGESSSTHKKE 257
           YICLA++EPV KH+PD  F++EA  SVK+     T    +  K+E
Sbjct: 61  YICLALKEPVDKHKPDASFVAEAKDSVKKLTSGVTSTDPALKKQE 105


>ref|NP_565728.1| Vacuolar ATPase assembly integral membrane protein VMA21-like
           domain [Arabidopsis thaliana] gi|20198067|gb|AAD24847.2|
           expressed protein [Arabidopsis thaliana]
           gi|21594831|gb|AAM66048.1| unknown [Arabidopsis
           thaliana] gi|88011071|gb|ABD38898.1| At2g31710
           [Arabidopsis thaliana] gi|330253481|gb|AEC08575.1|
           Vacuolar ATPase assembly integral membrane protein
           VMA21-like domain protein [Arabidopsis thaliana]
          Length = 105

 Score =  119 bits (299), Expect = 7e-25
 Identities = 58/105 (55%), Positives = 74/105 (70%)
 Frame = -1

Query: 571 MAGVMEKFIVASMFMWIVPVAILYGFNHELFPGXXXXXXXXXXXXSGFLAVISVNVVIAF 392
           MAGVM+KF++ASMFMWI+P+AILYGFN++L PG            SGFLAV+SVNVVI F
Sbjct: 1   MAGVMQKFLIASMFMWILPIAILYGFNNDLLPGSTTLSPHSLTLLSGFLAVVSVNVVIVF 60

Query: 391 YICLAMREPVQKHEPDPKFLSEATASVKQFKPVETGESSSTHKKE 257
           YICLA++EP  KH+PD  F++EA  SVK+     T    +  K+E
Sbjct: 61  YICLALKEPADKHKPDASFVAEAKDSVKKLTSGVTNTDPALKKQE 105


>ref|XP_002889564.1| hypothetical protein ARALYDRAFT_470584 [Arabidopsis lyrata subsp.
           lyrata] gi|297335406|gb|EFH65823.1| hypothetical protein
           ARALYDRAFT_470584 [Arabidopsis lyrata subsp. lyrata]
          Length = 106

 Score =  118 bits (295), Expect = 2e-24
 Identities = 58/106 (54%), Positives = 71/106 (66%)
 Frame = -1

Query: 571 MAGVMEKFIVASMFMWIVPVAILYGFNHELFPGXXXXXXXXXXXXSGFLAVISVNVVIAF 392
           MAGVM KF++ASMFMWI+PVAILYGFN+ L PG            SGFLAV+SVN+VI F
Sbjct: 1   MAGVMHKFLIASMFMWILPVAILYGFNYNLLPGSTTLSPHSLTLLSGFLAVVSVNIVIVF 60

Query: 391 YICLAMREPVQKHEPDPKFLSEATASVKQFKPVETGESSSTHKKEE 254
           YIC+A++EP  KH+PD  FL+EA  SV +     T       KK+E
Sbjct: 61  YICMALKEPADKHKPDAAFLAEAKDSVSKLTKGATSGDDHALKKQE 106


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