BLASTX nr result

ID: Cnidium21_contig00022279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022279
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191019.1| histone H2A [Arabidopsis thaliana] gi|297816752...   204   3e-50
ref|NP_001235400.1| uncharacterized protein LOC100499998 [Glycin...   202   8e-50
ref|NP_001237291.1| uncharacterized protein LOC100500133 [Glycin...   202   8e-50
ref|XP_002307619.1| histone 2 [Populus trichocarpa] gi|118486969...   202   8e-50
ref|XP_002300810.1| histone 2 [Populus trichocarpa] gi|118482024...   202   8e-50

>ref|NP_191019.1| histone H2A [Arabidopsis thaliana] gi|297816752|ref|XP_002876259.1|
           histone H2A.F/Z [Arabidopsis lyrata subsp. lyrata]
           gi|75277395|sp|O23628.1|H2AV1_ARATH RecName:
           Full=Histone H2A variant 1; AltName: Full=H2A.F/Z 1;
           AltName: Full=H2AvAt; AltName: Full=HTA11
           gi|2407800|emb|CAA73155.1| histone H2A.F/Z [Arabidopsis
           thaliana] gi|7258359|emb|CAB77576.1| histone H2A.F/Z
           [Arabidopsis thaliana] gi|21592838|gb|AAM64788.1|
           histone H2A.F/Z [Arabidopsis thaliana]
           gi|28950691|gb|AAO63269.1| At3g54560 [Arabidopsis
           thaliana] gi|110736078|dbj|BAF00012.1| histone H2A.F/Z
           [Arabidopsis thaliana] gi|297322097|gb|EFH52518.1|
           histone H2A.F/Z [Arabidopsis lyrata subsp. lyrata]
           gi|332645729|gb|AEE79250.1| histone H2A [Arabidopsis
           thaliana]
          Length = 136

 Score =  204 bits (518), Expect = 3e-50
 Identities = 103/110 (93%), Positives = 108/110 (98%)
 Frame = -3

Query: 823 RPISRSARAGLQFPVGRIHRHLKTRTSANGRVGATAAVYSAAILEYLTAEVLELAGNASK 644
           +PISRSARAG+QFPVGRIHR LKTR SA+GRVGATAAVY+A+ILEYLTAEVLELAGNASK
Sbjct: 27  KPISRSARAGIQFPVGRIHRQLKTRVSAHGRVGATAAVYTASILEYLTAEVLELAGNASK 86

Query: 643 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 494
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE
Sbjct: 87  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 136


>ref|NP_001235400.1| uncharacterized protein LOC100499998 [Glycine max]
           gi|255628411|gb|ACU14550.1| unknown [Glycine max]
          Length = 134

 Score =  202 bits (515), Expect = 8e-50
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = -3

Query: 823 RPISRSARAGLQFPVGRIHRHLKTRTSANGRVGATAAVYSAAILEYLTAEVLELAGNASK 644
           +PISRS+RAGLQFPVGRIHR LK+RT+ANGRVGATAAVYSAAILEYLTAEVLELAGNASK
Sbjct: 25  KPISRSSRAGLQFPVGRIHRLLKSRTTANGRVGATAAVYSAAILEYLTAEVLELAGNASK 84

Query: 643 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 494
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct: 85  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134


>ref|NP_001237291.1| uncharacterized protein LOC100500133 [Glycine max]
           gi|255629416|gb|ACU15054.1| unknown [Glycine max]
          Length = 135

 Score =  202 bits (515), Expect = 8e-50
 Identities = 103/110 (93%), Positives = 109/110 (99%)
 Frame = -3

Query: 823 RPISRSARAGLQFPVGRIHRHLKTRTSANGRVGATAAVYSAAILEYLTAEVLELAGNASK 644
           +PISRS+RAGLQFPVGRIHR LK+RT+ANGRVGATAAVYSAAILEYLTAEVLELAGNASK
Sbjct: 26  KPISRSSRAGLQFPVGRIHRLLKSRTTANGRVGATAAVYSAAILEYLTAEVLELAGNASK 85

Query: 643 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 494
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct: 86  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 135


>ref|XP_002307619.1| histone 2 [Populus trichocarpa] gi|118486969|gb|ABK95317.1| unknown
           [Populus trichocarpa] gi|222857068|gb|EEE94615.1|
           histone 2 [Populus trichocarpa]
          Length = 139

 Score =  202 bits (515), Expect = 8e-50
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = -3

Query: 823 RPISRSARAGLQFPVGRIHRHLKTRTSANGRVGATAAVYSAAILEYLTAEVLELAGNASK 644
           RP+SRS+RAG+QFPVGRIHRHLK R SA+GRVGATAAVY A+ILEYLTAEVLELAGNASK
Sbjct: 30  RPVSRSSRAGIQFPVGRIHRHLKQRISAHGRVGATAAVYLASILEYLTAEVLELAGNASK 89

Query: 643 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 494
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE
Sbjct: 90  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 139


>ref|XP_002300810.1| histone 2 [Populus trichocarpa] gi|118482024|gb|ABK92943.1| unknown
           [Populus trichocarpa] gi|222842536|gb|EEE80083.1|
           histone 2 [Populus trichocarpa]
          Length = 137

 Score =  202 bits (515), Expect = 8e-50
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = -3

Query: 823 RPISRSARAGLQFPVGRIHRHLKTRTSANGRVGATAAVYSAAILEYLTAEVLELAGNASK 644
           RP+SRS+RAG+QFPVGRIHRHLK R SA+GRVGATAAVY A+ILEYLTAEVLELAGNASK
Sbjct: 28  RPVSRSSRAGIQFPVGRIHRHLKQRISAHGRVGATAAVYLASILEYLTAEVLELAGNASK 87

Query: 643 DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 494
           DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE
Sbjct: 88  DLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTTKE 137


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