BLASTX nr result

ID: Cnidium21_contig00022278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022278
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB28472.1| polyprotein [Ananas comosus]                           129   4e-56
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   132   1e-55
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ...   133   6e-55
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]     133   7e-54
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   127   2e-53

>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  129 bits (324), Expect(2) = 4e-56
 Identities = 56/97 (57%), Positives = 78/97 (80%)
 Frame = -2

Query: 333  IYQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTY 154
            +++   V+ NLST+YHP +DGQ+EV+NRCLE+YLRC+  E  K+ AKWLPLAE+ YNT+Y
Sbjct: 856  LFKRLQVKVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSY 915

Query: 153  HTAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSL 43
            H++ K TP+EV+YG+PP +H PYL    ++EAVDR+L
Sbjct: 916  HSSTKATPYEVVYGQPPPLHVPYLAGDSLMEAVDRTL 952



 Score =  114 bits (285), Expect(2) = 4e-56
 Identities = 53/76 (69%), Positives = 61/76 (80%)
 Frame = -3

Query: 551  DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
            DFIEGLP SQGKEVIMVV+DRLSKYAHFI+LS P+TA  VA  FLDN+YKL G P +I  
Sbjct: 783  DFIEGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVS 842

Query: 371  DRDKVFINQFWTEFIK 324
            DRD +F++QFW E  K
Sbjct: 843  DRDTIFVSQFWQELFK 858


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  132 bits (332), Expect(2) = 1e-55
 Identities = 60/106 (56%), Positives = 80/106 (75%)
 Frame = -2

Query: 318  GVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYHTAVK 139
            GV   L+++YHP +DGQ+EV+NRCLE+YLRC+CH+  +  +KWL LAEY YNT YH++ +
Sbjct: 1237 GVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSR 1296

Query: 138  MTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
            MTPFE++YG+ P VH PYLP    V  V RSLQ+RE +L  LK +L
Sbjct: 1297 MTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHL 1342



 Score =  109 bits (273), Expect(2) = 1e-55
 Identities = 52/79 (65%), Positives = 62/79 (78%)
 Frame = -3

Query: 551  DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
            DFIEGLP S GK VIMVV+DRLSK AHFI+LS P++A+ VAH +LDNV+KL G P +I  
Sbjct: 1159 DFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVS 1218

Query: 371  DRDKVFINQFWTEFIKLQG 315
            DRD VF ++FW EF  LQG
Sbjct: 1219 DRDVVFTSEFWREFFTLQG 1237


>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
          Length = 1447

 Score =  133 bits (334), Expect(2) = 6e-55
 Identities = 60/110 (54%), Positives = 80/110 (72%)
 Frame = -2

Query: 330  YQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYH 151
            ++  GV   +S++YHP +DGQ+EV+NRCLE+YLRC+CH       KWLPLAEY YNT YH
Sbjct: 1204 FKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYH 1263

Query: 150  TAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
            ++ +MTPFE++YG+ P +H PYLP    V  V RSLQ+RE +L  LK +L
Sbjct: 1264 SSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARSLQERENMLLFLKFHL 1313



 Score =  106 bits (265), Expect(2) = 6e-55
 Identities = 50/79 (63%), Positives = 60/79 (75%)
 Frame = -3

Query: 551  DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
            DFIEGLP S GK VIMVV+DRLSK AHF++L+ P++A+ VA  FLDNVYK  G P +I  
Sbjct: 1130 DFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVS 1189

Query: 371  DRDKVFINQFWTEFIKLQG 315
            DRD +F + FW EF KLQG
Sbjct: 1190 DRDVLFTSDFWKEFFKLQG 1208


>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
          Length = 1557

 Score =  133 bits (334), Expect(2) = 7e-54
 Identities = 59/111 (53%), Positives = 84/111 (75%)
 Frame = -2

Query: 333  IYQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTY 154
            +++  GV    ST+YHP TDGQ+EV N+ LE+YLRC+  ++ +  +KWLPLAE+ YNTT+
Sbjct: 1288 LFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLPLAEWWYNTTF 1347

Query: 153  HTAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
            H+A+K TPFE++YG+PP VH PYLP       VDRSLQ+RE+++ +LK +L
Sbjct: 1348 HSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHL 1398



 Score =  103 bits (256), Expect(2) = 7e-54
 Identities = 48/81 (59%), Positives = 60/81 (74%)
 Frame = -3

Query: 551  DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
            DFIEGLP S GK  I+VVIDRLSK AHF++LS P+TAI+VA  +LDNV+KL G P  IT 
Sbjct: 1215 DFIEGLPPSAGKHCILVVIDRLSKNAHFMALSHPYTAIEVAQAYLDNVFKLHGMPKDITS 1274

Query: 371  DRDKVFINQFWTEFIKLQGSD 309
            DRD  F+++ W E  ++ G D
Sbjct: 1275 DRDPTFLSEVWRELFRVHGVD 1295


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  127 bits (319), Expect(2) = 2e-53
 Identities = 58/110 (52%), Positives = 79/110 (71%)
 Frame = -2

Query: 330  YQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYH 151
            ++  GV   LST+YHP TDGQ+EV+NRC+E+YLRC+  ++    A W+ LAE+ YNT+YH
Sbjct: 1140 FKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYH 1199

Query: 150  TAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
            +++KM+PFE +YG  P +  PY P    VEAVDR L +RE  LQLLK +L
Sbjct: 1200 SSLKMSPFEALYGYAPPLQIPYFPKDSNVEAVDRVLNERESWLQLLKHHL 1249



 Score =  107 bits (267), Expect(2) = 2e-53
 Identities = 51/79 (64%), Positives = 58/79 (73%)
 Frame = -3

Query: 551  DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
            DFIEGLPKS GK  I VV+DRL+KY HF+ L  P+TA  VA  FLD+VYKL G P +IT 
Sbjct: 1066 DFIEGLPKSNGKTTIFVVVDRLTKYGHFMLLPHPYTAKMVAQVFLDSVYKLHGLPHSITC 1125

Query: 371  DRDKVFINQFWTEFIKLQG 315
            DRD +F N FW EF KLQG
Sbjct: 1126 DRDPIFTNVFWQEFFKLQG 1144


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