BLASTX nr result
ID: Cnidium21_contig00022278
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00022278
(553 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACB28472.1| polyprotein [Ananas comosus] 129 4e-56
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 132 1e-55
gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 133 6e-55
gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 133 7e-54
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 127 2e-53
>gb|ACB28472.1| polyprotein [Ananas comosus]
Length = 953
Score = 129 bits (324), Expect(2) = 4e-56
Identities = 56/97 (57%), Positives = 78/97 (80%)
Frame = -2
Query: 333 IYQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTY 154
+++ V+ NLST+YHP +DGQ+EV+NRCLE+YLRC+ E K+ AKWLPLAE+ YNT+Y
Sbjct: 856 LFKRLQVKVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSY 915
Query: 153 HTAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSL 43
H++ K TP+EV+YG+PP +H PYL ++EAVDR+L
Sbjct: 916 HSSTKATPYEVVYGQPPPLHVPYLAGDSLMEAVDRTL 952
Score = 114 bits (285), Expect(2) = 4e-56
Identities = 53/76 (69%), Positives = 61/76 (80%)
Frame = -3
Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
DFIEGLP SQGKEVIMVV+DRLSKYAHFI+LS P+TA VA FLDN+YKL G P +I
Sbjct: 783 DFIEGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVS 842
Query: 371 DRDKVFINQFWTEFIK 324
DRD +F++QFW E K
Sbjct: 843 DRDTIFVSQFWQELFK 858
>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 1499
Score = 132 bits (332), Expect(2) = 1e-55
Identities = 60/106 (56%), Positives = 80/106 (75%)
Frame = -2
Query: 318 GVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYHTAVK 139
GV L+++YHP +DGQ+EV+NRCLE+YLRC+CH+ + +KWL LAEY YNT YH++ +
Sbjct: 1237 GVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSR 1296
Query: 138 MTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
MTPFE++YG+ P VH PYLP V V RSLQ+RE +L LK +L
Sbjct: 1297 MTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHL 1342
Score = 109 bits (273), Expect(2) = 1e-55
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = -3
Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
DFIEGLP S GK VIMVV+DRLSK AHFI+LS P++A+ VAH +LDNV+KL G P +I
Sbjct: 1159 DFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVS 1218
Query: 371 DRDKVFINQFWTEFIKLQG 315
DRD VF ++FW EF LQG
Sbjct: 1219 DRDVVFTSEFWREFFTLQG 1237
>gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana]
Length = 1447
Score = 133 bits (334), Expect(2) = 6e-55
Identities = 60/110 (54%), Positives = 80/110 (72%)
Frame = -2
Query: 330 YQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYH 151
++ GV +S++YHP +DGQ+EV+NRCLE+YLRC+CH KWLPLAEY YNT YH
Sbjct: 1204 FKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYH 1263
Query: 150 TAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
++ +MTPFE++YG+ P +H PYLP V V RSLQ+RE +L LK +L
Sbjct: 1264 SSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARSLQERENMLLFLKFHL 1313
Score = 106 bits (265), Expect(2) = 6e-55
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = -3
Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
DFIEGLP S GK VIMVV+DRLSK AHF++L+ P++A+ VA FLDNVYK G P +I
Sbjct: 1130 DFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVS 1189
Query: 371 DRDKVFINQFWTEFIKLQG 315
DRD +F + FW EF KLQG
Sbjct: 1190 DRDVLFTSDFWKEFFKLQG 1208
>gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri]
Length = 1557
Score = 133 bits (334), Expect(2) = 7e-54
Identities = 59/111 (53%), Positives = 84/111 (75%)
Frame = -2
Query: 333 IYQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTY 154
+++ GV ST+YHP TDGQ+EV N+ LE+YLRC+ ++ + +KWLPLAE+ YNTT+
Sbjct: 1288 LFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLPLAEWWYNTTF 1347
Query: 153 HTAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
H+A+K TPFE++YG+PP VH PYLP VDRSLQ+RE+++ +LK +L
Sbjct: 1348 HSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHL 1398
Score = 103 bits (256), Expect(2) = 7e-54
Identities = 48/81 (59%), Positives = 60/81 (74%)
Frame = -3
Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
DFIEGLP S GK I+VVIDRLSK AHF++LS P+TAI+VA +LDNV+KL G P IT
Sbjct: 1215 DFIEGLPPSAGKHCILVVIDRLSKNAHFMALSHPYTAIEVAQAYLDNVFKLHGMPKDITS 1274
Query: 371 DRDKVFINQFWTEFIKLQGSD 309
DRD F+++ W E ++ G D
Sbjct: 1275 DRDPTFLSEVWRELFRVHGVD 1295
>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
Length = 1378
Score = 127 bits (319), Expect(2) = 2e-53
Identities = 58/110 (52%), Positives = 79/110 (71%)
Frame = -2
Query: 330 YQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYH 151
++ GV LST+YHP TDGQ+EV+NRC+E+YLRC+ ++ A W+ LAE+ YNT+YH
Sbjct: 1140 FKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYH 1199
Query: 150 TAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1
+++KM+PFE +YG P + PY P VEAVDR L +RE LQLLK +L
Sbjct: 1200 SSLKMSPFEALYGYAPPLQIPYFPKDSNVEAVDRVLNERESWLQLLKHHL 1249
Score = 107 bits (267), Expect(2) = 2e-53
Identities = 51/79 (64%), Positives = 58/79 (73%)
Frame = -3
Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372
DFIEGLPKS GK I VV+DRL+KY HF+ L P+TA VA FLD+VYKL G P +IT
Sbjct: 1066 DFIEGLPKSNGKTTIFVVVDRLTKYGHFMLLPHPYTAKMVAQVFLDSVYKLHGLPHSITC 1125
Query: 371 DRDKVFINQFWTEFIKLQG 315
DRD +F N FW EF KLQG
Sbjct: 1126 DRDPIFTNVFWQEFFKLQG 1144