BLASTX nr result
ID: Cnidium21_contig00022278
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00022278 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACB28472.1| polyprotein [Ananas comosus] 129 4e-56 gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69... 132 1e-55 gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putativ... 133 6e-55 gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] 133 7e-54 emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] 127 2e-53 >gb|ACB28472.1| polyprotein [Ananas comosus] Length = 953 Score = 129 bits (324), Expect(2) = 4e-56 Identities = 56/97 (57%), Positives = 78/97 (80%) Frame = -2 Query: 333 IYQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTY 154 +++ V+ NLST+YHP +DGQ+EV+NRCLE+YLRC+ E K+ AKWLPLAE+ YNT+Y Sbjct: 856 LFKRLQVKVNLSTAYHPQSDGQTEVVNRCLENYLRCMAGERPKEWAKWLPLAEWWYNTSY 915 Query: 153 HTAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSL 43 H++ K TP+EV+YG+PP +H PYL ++EAVDR+L Sbjct: 916 HSSTKATPYEVVYGQPPPLHVPYLAGDSLMEAVDRTL 952 Score = 114 bits (285), Expect(2) = 4e-56 Identities = 53/76 (69%), Positives = 61/76 (80%) Frame = -3 Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372 DFIEGLP SQGKEVIMVV+DRLSKYAHFI+LS P+TA VA FLDN+YKL G P +I Sbjct: 783 DFIEGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTASSVAQLFLDNIYKLHGMPRSIVS 842 Query: 371 DRDKVFINQFWTEFIK 324 DRD +F++QFW E K Sbjct: 843 DRDTIFVSQFWQELFK 858 >gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana] Length = 1499 Score = 132 bits (332), Expect(2) = 1e-55 Identities = 60/106 (56%), Positives = 80/106 (75%) Frame = -2 Query: 318 GVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYHTAVK 139 GV L+++YHP +DGQ+EV+NRCLE+YLRC+CH+ + +KWL LAEY YNT YH++ + Sbjct: 1237 GVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAEYWYNTNYHSSSR 1296 Query: 138 MTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1 MTPFE++YG+ P VH PYLP V V RSLQ+RE +L LK +L Sbjct: 1297 MTPFEIVYGQVPPVHLPYLPGESKVAVVARSLQEREDMLLFLKFHL 1342 Score = 109 bits (273), Expect(2) = 1e-55 Identities = 52/79 (65%), Positives = 62/79 (78%) Frame = -3 Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372 DFIEGLP S GK VIMVV+DRLSK AHFI+LS P++A+ VAH +LDNV+KL G P +I Sbjct: 1159 DFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTSIVS 1218 Query: 371 DRDKVFINQFWTEFIKLQG 315 DRD VF ++FW EF LQG Sbjct: 1219 DRDVVFTSEFWREFFTLQG 1237 >gb|AAG51464.1|AC069160_10 gypsy/Ty3 element polyprotein, putative [Arabidopsis thaliana] Length = 1447 Score = 133 bits (334), Expect(2) = 6e-55 Identities = 60/110 (54%), Positives = 80/110 (72%) Frame = -2 Query: 330 YQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYH 151 ++ GV +S++YHP +DGQ+EV+NRCLE+YLRC+CH KWLPLAEY YNT YH Sbjct: 1204 FKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYH 1263 Query: 150 TAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1 ++ +MTPFE++YG+ P +H PYLP V V RSLQ+RE +L LK +L Sbjct: 1264 SSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARSLQERENMLLFLKFHL 1313 Score = 106 bits (265), Expect(2) = 6e-55 Identities = 50/79 (63%), Positives = 60/79 (75%) Frame = -3 Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372 DFIEGLP S GK VIMVV+DRLSK AHF++L+ P++A+ VA FLDNVYK G P +I Sbjct: 1130 DFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPTSIVS 1189 Query: 371 DRDKVFINQFWTEFIKLQG 315 DRD +F + FW EF KLQG Sbjct: 1190 DRDVLFTSDFWKEFFKLQG 1208 >gb|AFJ66186.1| hypothetical protein 11M19.5 [Arabidopsis halleri] Length = 1557 Score = 133 bits (334), Expect(2) = 7e-54 Identities = 59/111 (53%), Positives = 84/111 (75%) Frame = -2 Query: 333 IYQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTY 154 +++ GV ST+YHP TDGQ+EV N+ LE+YLRC+ ++ + +KWLPLAE+ YNTT+ Sbjct: 1288 LFRVHGVDLRFSTAYHPQTDGQTEVTNKTLETYLRCMTADAPQTWSKWLPLAEWWYNTTF 1347 Query: 153 HTAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1 H+A+K TPFE++YG+PP VH PYLP VDRSLQ+RE+++ +LK +L Sbjct: 1348 HSAIKCTPFEIVYGQPPPVHLPYLPGESSSVVVDRSLQKREELIAMLKFHL 1398 Score = 103 bits (256), Expect(2) = 7e-54 Identities = 48/81 (59%), Positives = 60/81 (74%) Frame = -3 Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372 DFIEGLP S GK I+VVIDRLSK AHF++LS P+TAI+VA +LDNV+KL G P IT Sbjct: 1215 DFIEGLPPSAGKHCILVVIDRLSKNAHFMALSHPYTAIEVAQAYLDNVFKLHGMPKDITS 1274 Query: 371 DRDKVFINQFWTEFIKLQGSD 309 DRD F+++ W E ++ G D Sbjct: 1275 DRDPTFLSEVWRELFRVHGVD 1295 >emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera] Length = 1378 Score = 127 bits (319), Expect(2) = 2e-53 Identities = 58/110 (52%), Positives = 79/110 (71%) Frame = -2 Query: 330 YQTTGVRHNLSTSYHPHTDGQSEVLNRCLESYLRCICHESTKDRAKWLPLAEYLYNTTYH 151 ++ GV LST+YHP TDGQ+EV+NRC+E+YLRC+ ++ A W+ LAE+ YNT+YH Sbjct: 1140 FKLQGVSLQLSTAYHPQTDGQTEVVNRCIETYLRCMAGDNPGQWANWISLAEFWYNTSYH 1199 Query: 150 TAVKMTPFEVMYGEPPHVHRPYLPVSCMVEAVDRSLQQREKILQLLKENL 1 +++KM+PFE +YG P + PY P VEAVDR L +RE LQLLK +L Sbjct: 1200 SSLKMSPFEALYGYAPPLQIPYFPKDSNVEAVDRVLNERESWLQLLKHHL 1249 Score = 107 bits (267), Expect(2) = 2e-53 Identities = 51/79 (64%), Positives = 58/79 (73%) Frame = -3 Query: 551 DFIEGLPKSQGKEVIMVVIDRLSKYAHFISLSRPFTAIKVAHGFLDNVYKLDGFPATITL 372 DFIEGLPKS GK I VV+DRL+KY HF+ L P+TA VA FLD+VYKL G P +IT Sbjct: 1066 DFIEGLPKSNGKTTIFVVVDRLTKYGHFMLLPHPYTAKMVAQVFLDSVYKLHGLPHSITC 1125 Query: 371 DRDKVFINQFWTEFIKLQG 315 DRD +F N FW EF KLQG Sbjct: 1126 DRDPIFTNVFWQEFFKLQG 1144