BLASTX nr result

ID: Cnidium21_contig00022277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022277
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...    96   5e-18
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002884710.1| hypothetical protein ARALYDRAFT_478217 [Arab...    89   6e-16
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...    89   6e-16
ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloro...    87   2e-15

>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score = 95.5 bits (236), Expect = 5e-18
 Identities = 52/105 (49%), Positives = 61/105 (58%), Gaps = 8/105 (7%)
 Frame = +2

Query: 182 RSSFSCETHPLEQFNGFCPLCLCERXXXXXXXXXXXXXXXXXXXXXXX-------KSIFK 340
           R S SC+ HP E F GFCP CLCER                              K+IFK
Sbjct: 22  RPSTSCDRHPEEHFTGFCPSCLCERLAVLEPSSSTASSSRKPPPIPTTTTATAALKAIFK 81

Query: 341 INKTN-PSFFPELRRSQSFSASKNEPFSGVFEPQRHSCDIRARKS 472
            + ++ PSFFPELRR++SFSASKNE FSGVFEPQR SCD+R R +
Sbjct: 82  PSSSDRPSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRST 126


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 55/125 (44%), Positives = 65/125 (52%), Gaps = 17/125 (13%)
 Frame = +2

Query: 182 RSSFSCETHPLEQFNGFCPLCLCER---XXXXXXXXXXXXXXXXXXXXXXXKSIFK---- 340
           R S SC+ HP E F GFCP CLCER                          K+IFK    
Sbjct: 15  RPSTSCDRHPEEHFTGFCPSCLCERLAVLDPNTSSAASSSSSRKPTATAALKAIFKPPQP 74

Query: 341 ------INKTNPSFFPELRRSQSFSASKNEPFSGVFEPQRHSCDIRARKS----FNLEQE 490
                  N +  SFFPELRR++SFSASKNE FSGVFEPQR SCD+R R +    FN + E
Sbjct: 75  SSSNNNNNSSKSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRVRNTLWSLFNQDSE 134

Query: 491 NSKPI 505
            +  +
Sbjct: 135 RNPSV 139


>ref|XP_002884710.1| hypothetical protein ARALYDRAFT_478217 [Arabidopsis lyrata subsp.
           lyrata] gi|297330550|gb|EFH60969.1| hypothetical protein
           ARALYDRAFT_478217 [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 59/147 (40%), Positives = 72/147 (48%), Gaps = 23/147 (15%)
 Frame = +2

Query: 182 RSSFSCETHPLEQFNGFCPLCLCERXXXXXXXXXXXXXXXXXXXXXXX------KSIFKI 343
           R S SC+ HP E+F GFCP CLCER                             K++FK 
Sbjct: 26  RLSTSCDRHPEERFTGFCPSCLCERLSVLDQSNNGGASSSSSSKKPPTISAAALKALFKP 85

Query: 344 NKTN--------------PSFFPELRRSQSFSASKN-EPFSGVFEPQRHSCDIRARKS-F 475
           +  N              P FFPELRR++SFSASKN E FSGVFEPQR SCD+R R S +
Sbjct: 86  SGNNGGGGGNNNGNGRVKPGFFPELRRTKSFSASKNNEGFSGVFEPQRRSCDVRLRSSLW 145

Query: 476 NL-EQENSKPIGSQAQNKVLETRGAKS 553
           NL  Q+  + + S      +E    KS
Sbjct: 146 NLFSQDEQRNLPSNVSGGEIEVEPRKS 172


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 52/114 (45%), Positives = 58/114 (50%), Gaps = 19/114 (16%)
 Frame = +2

Query: 182 RSSFSCETHPLEQFNGFCPLCLCERXXXXXXXXXXXXXXXXXXXXXXX---KSIFKI--- 343
           R S SC+ HP E F GFCP CLCER                          K+IFK    
Sbjct: 20  RHSTSCDRHPEEHFTGFCPSCLCERLAVLDPNTSSAASSSSSRKPTATAALKAIFKPSQL 79

Query: 344 -------------NKTNPSFFPELRRSQSFSASKNEPFSGVFEPQRHSCDIRAR 466
                        N  + SFFPELRR++SFSASKNE FSGVFEPQR SCD+R R
Sbjct: 80  SSSSNNNNNNNNNNNKSSSFFPELRRTKSFSASKNEGFSGVFEPQRKSCDVRER 133


>ref|XP_003530255.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 656

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 58/142 (40%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
 Frame = +2

Query: 182 RSSFSCETHPLEQFNGFCPLCLCERXXXXXXXXXXXXXXXXXXXXXXX-----KSIFKI- 343
           R S SC+ HP E F GFCP CLCER                            K+IF+  
Sbjct: 25  RPSTSCDRHPQENFTGFCPSCLCERLAVLDPNSSSTSSAARKPPTSSTAAAALKAIFRPS 84

Query: 344 ----NKTNPS-FFPELRRSQSFSASKNEPFSGVFEPQRHSCDIRARKS----FN------ 478
               N+  PS F PELRR++SFSASKNE  SG FEPQR SCD+R R +    FN      
Sbjct: 85  IAARNRPPPSSFLPELRRTKSFSASKNEALSGFFEPQRKSCDVRGRSTLFSLFNQEAAVA 144

Query: 479 --LEQENSKPIGSQAQNKVLET 538
             +E  ++ P  S  Q  VLE+
Sbjct: 145 VEVETRHNLPSSSVVQKPVLES 166


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