BLASTX nr result

ID: Cnidium21_contig00022242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022242
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34306.1| Polyprotein, putative [Solanum demissum]               140   3e-36
gb|AAU90333.1| Putative gag and pol polyprotein, identical [Sola...   140   1e-31
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          117   2e-26
ref|XP_003551572.1| PREDICTED: uncharacterized protein LOC100804...   120   1e-25
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   115   4e-25

>gb|ABI34306.1| Polyprotein, putative [Solanum demissum]
          Length = 1691

 Score =  140 bits (354), Expect(2) = 3e-36
 Identities = 66/112 (58%), Positives = 82/112 (73%), Gaps = 1/112 (0%)
 Frame = -2

Query: 408 EVNLVGGADGWWVDTGASRHVCYDRTMFKTYADADDKK-VLLGDSHTTNVAGIGNVELKF 232
           ++N+V   DGWW D+GA+RHVCYD+  FK Y   ++ K ++LGDSHTT V G G+VEL F
Sbjct: 300 DINMVENVDGWWADSGANRHVCYDKDWFKKYTHFEEPKTIMLGDSHTTQVLGTGDVELCF 359

Query: 231 TSGKTLLLKDVLHTPEMRKNLVSGFLLNKGGFTHTIGSDLFTITKNGIFVGK 76
           TSG+ L LKDVL+TP MRK L+S FLLNK GF   I S+ + I K GIFVGK
Sbjct: 360 TSGRVLTLKDVLYTPSMRKKLMSSFLLNKAGFKQIIESNQYVIVKKGIFVGK 411



 Score = 36.2 bits (82), Expect(2) = 3e-36
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -3

Query: 77  KGYAVDGMFKLNAEVNKISIS 15
           KGYA DGMFKLN E+NK S S
Sbjct: 411 KGYACDGMFKLNVEMNKTSTS 431


>gb|AAU90333.1| Putative gag and pol polyprotein, identical [Solanum demissum]
          Length = 853

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
 Frame = -2

Query: 408 EVNLVGGADGWWVDTGASRHVCYDRTMFKTYADADDKK-VLLGDSHTTNVAGIGNVELKF 232
           ++N+V   DGWWVD+GA+RHVCYD+  FK Y   ++ K ++LGD+HTT V G G+VEL F
Sbjct: 147 DINMVENVDGWWVDSGANRHVCYDKDWFKKYTHFEEPKTIMLGDAHTTQVLGKGDVELCF 206

Query: 231 TSGKTLLLKDVLHTPEMRKNLVSGFLLNKGGFTHTIGSDLFTITKNGIFVGK 76
           +SG+ L LKDVL+TP MRKNL+S FL NK GF   I SD + I K GIFVGK
Sbjct: 207 SSGRELTLKDVLYTPSMRKNLMSSFLFNKVGFKQIIESDQYVIVKKGIFVGK 258


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  117 bits (292), Expect(2) = 2e-26
 Identities = 58/113 (51%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
 Frame = -2

Query: 408 EVNLVGGADG-WWVDTGASRHVCYDRTMFKTYADADDK-KVLLGDSHTTNVAGIGNVELK 235
           EVN+VG     WW+DTGA+RHVC D+ +F ++  A ++ K+ +G+S T+ + G G V LK
Sbjct: 314 EVNMVGSNPREWWIDTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALK 373

Query: 234 FTSGKTLLLKDVLHTPEMRKNLVSGFLLNKGGFTHTIGSDLFTITKNGIFVGK 76
            TSGK L L +VL+ PE+RKNLVSG LLNK GF     SD+  ++KNG++VGK
Sbjct: 374 MTSGKELTLNNVLYVPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGK 426



 Score = 27.3 bits (59), Expect(2) = 2e-26
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 77  KGYAVDGMFKLNAEVNKISISSK 9
           KGY  DG+FKLN    K +I++K
Sbjct: 426 KGYVNDGLFKLNVMTLKPTINNK 448


>ref|XP_003551572.1| PREDICTED: uncharacterized protein LOC100804842 [Glycine max]
          Length = 651

 Score =  120 bits (300), Expect = 1e-25
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = -2

Query: 387 ADGWWVDTGASRHVCYDRTMFKTYADADDKKVLLGDSHTTNVAGIGNVELKFTSGKTLLL 208
           +DGW VDTGASR+VCYDR M KTY + ++KKVLLGDSHTT VAG  +VELKFTS KTL+L
Sbjct: 374 SDGWGVDTGASRYVCYDRVMIKTYMNVENKKVLLGDSHTTTVAGTRDVELKFTSEKTLIL 433

Query: 207 KDVLHTPEMRKNL 169
           KDV+HTPEMRKNL
Sbjct: 434 KDVMHTPEMRKNL 446


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  115 bits (288), Expect(2) = 4e-25
 Identities = 59/113 (52%), Positives = 79/113 (69%), Gaps = 2/113 (1%)
 Frame = -2

Query: 408 EVNLVGG-ADGWWVDTGASRHVCYDRTMFKTYADADD-KKVLLGDSHTTNVAGIGNVELK 235
           EVNLVG     WW+DTGA+RHVC D+ MF T+   ++ +KV +G+S T+ + G G V LK
Sbjct: 325 EVNLVGSNPKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILK 384

Query: 234 FTSGKTLLLKDVLHTPEMRKNLVSGFLLNKGGFTHTIGSDLFTITKNGIFVGK 76
            TSGK L L +VL+ PE+RKNLVSG LLN  GF     S+ F ++K+G++VGK
Sbjct: 385 MTSGKELTLTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGK 437



 Score = 24.3 bits (51), Expect(2) = 4e-25
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 6/28 (21%)
 Frame = -3

Query: 77  KGYAVDGMFKLN------AEVNKISISS 12
           KGY  DGM+KLN      + +NK S S+
Sbjct: 437 KGYMSDGMWKLNVMTIIKSNMNKASTST 464


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