BLASTX nr result

ID: Cnidium21_contig00022188 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00022188
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532944.1| PREDICTED: protein RRNAD1-like [Glycine max]      164   1e-38
ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 ...   159   6e-37
ref|XP_003595971.1| hypothetical protein MTR_2g064450 [Medicago ...   155   6e-36
ref|XP_003579155.1| PREDICTED: protein RRNAD1-like [Brachypodium...   150   2e-34
ref|NP_001067247.1| Os12g0610500 [Oryza sativa Japonica Group] g...   149   4e-34

>ref|XP_003532944.1| PREDICTED: protein RRNAD1-like [Glycine max]
          Length = 563

 Score =  164 bits (415), Expect = 1e-38
 Identities = 90/195 (46%), Positives = 130/195 (66%)
 Frame = +2

Query: 2   YYPEILVSSPAVGRQGKALRRQQNRKAMDSGLHLEGTLDHPLPVSQRNCKKNVTWTTENA 181
           YYPEI++S+P++GR+GKALRR+  R++ +S LHL+G+  H     + N    V   +E  
Sbjct: 371 YYPEIVMSTPSIGRKGKALRRRHQRRSAESQLHLKGSTCH----MRHNFPSVVPSESETD 426

Query: 182 ETEVTLSEKQKGPEPDHTDLVIQNASLEPVAEKRTYAEKYMLFEKFSQSALGRLGLHGWK 361
               ++SE Q  P    ++   + A  E +       +K   FE F QS L  LG+   +
Sbjct: 427 GILGSMSEIQTLPGEIPSN---ERAGCEVIKSD----DKLSHFENFCQSGLSHLGIKHSQ 479

Query: 362 EIDLAGLWKKSESSAELIGPYWSLRAALGPVLETIVLLDRLLFLQEQGNSLEVLMLPIFN 541
           +I+L G+WK++E  A+L+GPYWSLRAALGP+LET+++LDRLLFLQEQG++LE  +LPIF+
Sbjct: 480 DINLQGIWKEAEPFADLVGPYWSLRAALGPLLETLIILDRLLFLQEQGSALEACLLPIFD 539

Query: 542 PTLSPRNVAFISWKI 586
           P +SPRNVA I+ KI
Sbjct: 540 PKISPRNVAIIAKKI 554


>ref|XP_002269801.1| PREDICTED: uncharacterized protein C12orf26 homolog [Vitis
           vinifera] gi|296082802|emb|CBI21807.3| unnamed protein
           product [Vitis vinifera]
          Length = 546

 Score =  159 bits (401), Expect = 6e-37
 Identities = 88/194 (45%), Positives = 118/194 (60%)
 Frame = +2

Query: 2   YYPEILVSSPAVGRQGKALRRQQNRKAMDSGLHLEGTLDHPLPVSQRNCKKNVTWTTENA 181
           YYPE+L++SPA+GRQGKALRRQQ R+ ++S L  E                      + A
Sbjct: 381 YYPEVLITSPAIGRQGKALRRQQQRRNLESSLQPE--------------------KDDKA 420

Query: 182 ETEVTLSEKQKGPEPDHTDLVIQNASLEPVAEKRTYAEKYMLFEKFSQSALGRLGLHGWK 361
              +      +G   D T           +++     +KY LFEKF +S L RLGL    
Sbjct: 421 AFAMEKDSLFQGISSDETT----------ISDAINSVDKYSLFEKFCKSGLCRLGLKPLP 470

Query: 362 EIDLAGLWKKSESSAELIGPYWSLRAALGPVLETIVLLDRLLFLQEQGNSLEVLMLPIFN 541
           +++   +W+++   AE IGPYWSLRAALGP+LET++LLDRLLFLQEQG+S+E +MLPIF+
Sbjct: 471 DVNFKEVWEEAAPFAEFIGPYWSLRAALGPLLETLILLDRLLFLQEQGSSVEAVMLPIFD 530

Query: 542 PTLSPRNVAFISWK 583
           P LSPRNVA I+ K
Sbjct: 531 PVLSPRNVAIIAKK 544


>ref|XP_003595971.1| hypothetical protein MTR_2g064450 [Medicago truncatula]
           gi|355485019|gb|AES66222.1| hypothetical protein
           MTR_2g064450 [Medicago truncatula]
          Length = 589

 Score =  155 bits (392), Expect = 6e-36
 Identities = 88/197 (44%), Positives = 118/197 (59%), Gaps = 2/197 (1%)
 Frame = +2

Query: 2   YYPEILVSSPAVGRQGKALRRQQNRKAM--DSGLHLEGTLDHPLPVSQRNCKKNVTWTTE 175
           YYPE+ +S+P++GR+GKALRR+  R++   DS LHL+G              K    +  
Sbjct: 416 YYPEVAISTPSIGRKGKALRRRNQRRSAESDSKLHLKG--------------KGTFGSA- 460

Query: 176 NAETEVTLSEKQKGPEPDHTDLVIQNASLEPVAEKRTYAEKYMLFEKFSQSALGRLGLHG 355
            +ET+    E       ++  + I N              K+  FE F QS L  LGL  
Sbjct: 461 -SETQTLSGEISSNESAEYEGIKIDN--------------KFSNFENFCQSGLSHLGLKH 505

Query: 356 WKEIDLAGLWKKSESSAELIGPYWSLRAALGPVLETIVLLDRLLFLQEQGNSLEVLMLPI 535
             ++ L G WK+ E  ++LIGPYWSLRAALGP+LET++LLDRLLFLQEQGN+LE  +LPI
Sbjct: 506 SHDVSLQGTWKEVEPFSDLIGPYWSLRAALGPLLETLILLDRLLFLQEQGNALEAYLLPI 565

Query: 536 FNPTLSPRNVAFISWKI 586
           F+P +SPRNVA I+ KI
Sbjct: 566 FDPNISPRNVAIIAKKI 582


>ref|XP_003579155.1| PREDICTED: protein RRNAD1-like [Brachypodium distachyon]
          Length = 564

 Score =  150 bits (380), Expect = 2e-34
 Identities = 84/195 (43%), Positives = 119/195 (61%)
 Frame = +2

Query: 2   YYPEILVSSPAVGRQGKALRRQQNRKAMDSGLHLEGTLDHPLPVSQRNCKKNVTWTTENA 181
           Y+PE+   SP++GRQGKALRRQ+ RK M+S  H+    +  LP S  N K+       + 
Sbjct: 371 YFPEVSRLSPSIGRQGKALRRQRLRKVMES--HMAMGKNDDLPYS--NSKEQNMTMDSSL 426

Query: 182 ETEVTLSEKQKGPEPDHTDLVIQNASLEPVAEKRTYAEKYMLFEKFSQSALGRLGLHGWK 361
            TE T  E   G      D  I   ++ P        +K+ LF+ F+ S L RL     +
Sbjct: 427 PTEPTDLEGAVG----FVDSSISRVNVGPTGIYLDECDKFTLFKDFTVSGLARLDCGFVE 482

Query: 362 EIDLAGLWKKSESSAELIGPYWSLRAALGPVLETIVLLDRLLFLQEQGNSLEVLMLPIFN 541
           ++ L  +WK  +  AE IGP+W LRAALGP++ET +LLDRLLFLQEQG ++E L+ P+F+
Sbjct: 483 DVHLLEIWKAVQRFAEFIGPFWCLRAALGPLVETYILLDRLLFLQEQGGAVEALLFPLFD 542

Query: 542 PTLSPRNVAFISWKI 586
           PT+SPRN+A ++WK+
Sbjct: 543 PTMSPRNMAVVAWKL 557


>ref|NP_001067247.1| Os12g0610500 [Oryza sativa Japonica Group]
           gi|77556570|gb|ABA99366.1| expressed protein [Oryza
           sativa Japonica Group] gi|113649754|dbj|BAF30266.1|
           Os12g0610500 [Oryza sativa Japonica Group]
          Length = 576

 Score =  149 bits (376), Expect = 4e-34
 Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 5/200 (2%)
 Frame = +2

Query: 2   YYPEILVSSPAVGRQGKALRRQQNRKAMDSGLHLEGT--LDHPLPVSQRNCKKNVTWTTE 175
           ++PE+  SSP++GRQGKALRRQ+ RK M+S + +  T  L +     Q   K +   T  
Sbjct: 374 HFPEVSRSSPSIGRQGKALRRQRLRKVMESPMAMAETDALSYSTQKEQIMTKDDPLPTGP 433

Query: 176 NAETEVT---LSEKQKGPEPDHTDLVIQNASLEPVAEKRTYAEKYMLFEKFSQSALGRLG 346
           N   EV    L E   G      D  +  A++ P       ++K+ LF+ F+ S LGRLG
Sbjct: 434 NNFKEVHVDFLPELSTG----FVDSAVSGAAVVPDDIYLDKSQKFTLFKDFTVSGLGRLG 489

Query: 347 LHGWKEIDLAGLWKKSESSAELIGPYWSLRAALGPVLETIVLLDRLLFLQEQGNSLEVLM 526
               + + L  +WK  +   E IGP+W LR ALGP++ET +LLDRLLFLQEQG+ +E  +
Sbjct: 490 CDFVENVSLLEIWKDVQPFTEFIGPFWCLRVALGPLVETYILLDRLLFLQEQGSVIEASL 549

Query: 527 LPIFNPTLSPRNVAFISWKI 586
            P+FNPT+SPRN+A I+WK+
Sbjct: 550 FPLFNPTMSPRNMAIIAWKL 569


Top